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64_002_scaffold_65

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_65_1

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comp(77..1078)
DNA (1002bp) protein (334aa)
Proline dehydrogenase 1 n=14 Tax=Staphylococcus epidermidis RepID=H3UCL0_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ20589.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
proline dehydrogenase
64_002_scaffold_65_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1321..2148
DNA (828bp) protein (276aa)
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=J0FK74_STAEP
lysophospholipase-like protein
Lysophospholipase, putative {ECO:0000313|EMBL:AAW54651.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_65_3

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2629..3054
DNA (426bp) protein (142aa)
HTH-type transcriptional regulator rot n=1 Tax=Staphylococcus epidermidis NIH04008 RepID=J1CHW3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ20587.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rot; repressor of toxins
64_002_scaffold_65_4

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comp(3276..3839)
DNA (564bp) protein (188aa)
SAM-dependent methyltransferase, MraW methylase family (EC:2.1.1.-)
Uncharacterized protein n=39 Tax=Staphylococcus epidermidis RepID=Q8CS36_STAES
rRNA methyltransferase {ECO:0000313|EMBL:ETJ20586.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_65_5

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comp(3836..4789)
DNA (954bp) protein (318aa)
Uncharacterized protein n=40 Tax=Staphylococcus epidermidis RepID=Q8CS37_STAES
hypothetical protein
Radical SAM protein {ECO:0000313|EMBL:ETJ20585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_65_6

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4896..6110
DNA (1215bp) protein (405aa)
Multidrug resistance protein-like protein n=33 Tax=Staphylococcus epidermidis RepID=Q8CNU7_STAES
multidrug resistance protein-like protein
MFS family major facilitator transporter {ECO:0000313|EMBL:ETJ20584.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_65_7

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6372..8816
DNA (2445bp) protein (815aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=2 Tax=Staphylococcus epidermidis RepID=C5Q9Z6_STAEP
Leucine-tRNA ligase {ECO:0000313|EMBL:ETJ20583.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_65_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8842..9153
DNA (312bp) protein (104aa)
Rhodanese-like domain protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HNF2_STAEQ
Rhodanese-like domain protein
Rhodanese-like protein {ECO:0000313|EMBL:EFE59906.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_65_9

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9558..20636
DNA (11079bp) protein (3693aa)
Gram-positive signal peptide protein, YSIRK family n=4 Tax=Staphylococcus epidermidis RepID=H3UCK2_STAEP
Cell wall surface anchor family protein {ECO:0000313|EMBL:ETJ20226.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
cell wall surface anchor family protein
64_002_scaffold_65_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21008..22270)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HNF4_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54643.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_65_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22543..24204
DNA (1662bp) protein (554aa)
Polysaccharide biosynthesis protein n=44 Tax=Staphylococcus epidermidis RepID=C5Q9Z2_STAEP
polysaccharide biosynthesis family protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFE59909.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_65_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24201..24893
DNA (693bp) protein (231aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Pseudouridine synthase n=43 Tax=Staphylococcus epidermidis RepID=C5Q9Z1_STAEP
pseudouridine synthase
64_002_scaffold_65_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24911..25339
DNA (429bp) protein (143aa)
Uncharacterized protein n=18 Tax=Staphylococcus epidermidis RepID=D4FI81_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59911.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Hypothetical protein SAV1752
64_002_scaffold_65_14

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25647..27056
DNA (1410bp) protein (470aa)
Xaa-His dipeptidase (EC:3.4.13.-)
Dipeptidase PepV n=40 Tax=Staphylococcus epidermidis RepID=C5Q9Y9_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ20231.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_65_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27060..27908
DNA (849bp) protein (283aa)
dat; D-amino-acid transaminase (EC:2.6.1.21)
D-alanine aminotransferase {ECO:0000256|RuleBase:RU004520}; EC=2.6.1.21 {ECO:0000256|RuleBase:RU004520};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
D-alanine aminotransferase n=47 Tax=Staphylococcus epidermidis RepID=C5Q9Y8_STAEP
64_002_scaffold_65_16

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28292..29086
DNA (795bp) protein (265aa)
Phosphotransferase enzyme family n=3 Tax=Staphylococcus epidermidis RepID=C5Q9Y7_STAEP
Kanamycin kinase {ECO:0000313|EMBL:ETJ20233.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
64_002_scaffold_65_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29097..29747
DNA (651bp) protein (217aa)
tRNA (guanine46-N7-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Staphylococcus epidermidis VCU109 RepID=F9LSM3_STAEP
64_002_scaffold_65_18
unknown

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29784..29957
DNA (174bp) protein (58aa)

This feature has no annotations

64_002_scaffold_65_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(29909..30250)
DNA (342bp) protein (114aa)
Uncharacterized protein n=46 Tax=Staphylococcus epidermidis RepID=Q8CS45_STAES
hypothetical protein
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EFE59916.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_65_20

Not on your lists

30308..31393
DNA (1086bp) protein (362aa)
M42 glutamyl aminopeptidase n=26 Tax=Staphylococcus epidermidis RepID=D4FI87_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ20236.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
peptidase M20/M25/M40 family protein
64_002_scaffold_65_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31399..31710
DNA (312bp) protein (104aa)
Thioredoxin, putative n=52 Tax=Staphylococcus epidermidis RepID=Q5HNG5_STAEQ
Thioredoxin CDS_ID OB2235
Thioredoxin {ECO:0000313|EMBL:EFE59918.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_65_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31848..32702
DNA (855bp) protein (285aa)
UPF0354 protein SERP1303 n=45 Tax=Staphylococcus epidermidis RepID=Y1303_STAEQ
Uncharacterized SAV1743 homolog
UPF0354 protein HMPREF0794_0277 {ECO:0000256|HAMAP-Rule:MF_01548}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_65_23

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32725..33321
DNA (597bp) protein (199aa)
Uncharacterized protein n=53 Tax=Staphylococcus epidermidis RepID=Q5HNG7_STAEQ
tRNA binding domain protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ20239.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_65_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33342..36851
DNA (3510bp) protein (1170aa)
FtsK/SpoIIIE family protein n=23 Tax=Staphylococcus epidermidis RepID=Q5HNG8_STAEQ
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EFE59921.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
FtsK/SpoIIIE family protein
64_002_scaffold_65_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36872..38185
DNA (1314bp) protein (438aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00046}; EC=6.3.2.8 {ECO:0000255|HAMAP-Rule:MF_00046};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000255|HAMAP-Rule:MF_00046}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
UDP-N-acetylmuramate--L-alanine ligase n=15 Tax=Staphylococcus epidermidis RepID=F3TWI8_STAEP
64_002_scaffold_65_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38260..38751
DNA (492bp) protein (164aa)
UPF0478 protein SERP1299 n=81 Tax=Staphylococcus epidermidis RepID=Y1299_STAEQ rbh
General stress protein-like protein
Uncharacterized protein {ECO:0000313|EMBL:ESV19858.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_002_scaffold_65_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38772..40052
DNA (1281bp) protein (427aa)
Smooth muscle caldesmon n=37 Tax=Staphylococcus epidermidis RepID=Q8CNV6_STAES
smooth muscle caldesmon
Uncharacterized protein {ECO:0000313|EMBL:EFE59924.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_65_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

40487..41578
DNA (1092bp) protein (364aa)
Chorismate mutase/phospho-2-dehydro-3-deoxyheptonate aldolase n=62 Tax=Staphylococcus epidermidis RepID=Q5HNH2_STAEQ
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase
Chorismate mutase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AAW54710.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_65_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

41834..42823
DNA (990bp) protein (330aa)
Catabolite control protein A n=49 Tax=Staphylococcus epidermidis RepID=CCPA_STAEQ rbh
Catabolite control protein A
Catabolite control protein A {ECO:0000313|EMBL:EFE59926.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_65_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

43243..44910
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Formate--tetrahydrofolate ligase n=44 Tax=Staphylococcus epidermidis RepID=FTHS_STAEQ rbh
Displaying items 1-30 of 49 in total

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