ggKbase home page

64_002_scaffold_228

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_228_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3..110
DNA (108bp) protein (36aa)
Staphylococcal secretory antigen ssaA n=17 Tax=Staphylococcaceae RepID=E6JPJ0_STAEP
secretory antigen precursor SsaA
Staphylococcal secretory antigen SsaA; Flags: Precursor;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
64_002_scaffold_228_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(559..1956)
DNA (1398bp) protein (466aa)
Na+/H+ antiporter NhaC n=37 Tax=Staphylococcus epidermidis RepID=Q5HLV1_STAEQ
Na/H antiporter NhaC
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:AAW55261.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_228_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2021..3091)
DNA (1071bp) protein (357aa)
NAD/NADP octopine/nopaline dehydrogenase family protein n=41 Tax=Staphylococcus epidermidis RepID=Q5HLV0_STAEQ
NAD/NADP octopine/nopaline dehydrogenase family protein
NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain protein {ECO:0000313|EMBL:EFE57933.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3455..3967
DNA (513bp) protein (171aa)
Uncharacterized protein n=39 Tax=Staphylococcus epidermidis RepID=Q5HLU9_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:EFE57932.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Hypothetical protein SAV2303
64_002_scaffold_228_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4289..4762
DNA (474bp) protein (158aa)
CHAP domain protein n=5 Tax=Staphylococcus epidermidis RepID=J0SZT5_STAEP
Secretory antigen SsaA homolog
CHAP domain protein {ECO:0000313|EMBL:EFE57931.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4915..5241
DNA (327bp) protein (109aa)
SMR-type multidrug efflux transporter n=65 Tax=Staphylococcus epidermidis RepID=Q8CNC0_STAES
Quaternary ammonium compound-resistance protein sugE
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EES34984.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_002_scaffold_228_7
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5247..5564
DNA (318bp) protein (106aa)
SugE protein n=40 Tax=Staphylococcus epidermidis RepID=Q5HLU5_STAEQ
Quaternary ammonium compound-resistance protein sugE
DMT superfamily drug/metabolite transporter {ECO:0000313|EMBL:ETJ12240.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_002_scaffold_228_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5642..6595
DNA (954bp) protein (318aa)
Glyoxylate reductase / Glyoxylate reductase / Hydroxypyruvate reductase (EC:1.1.1.79)
Putative 2-hydroxyacid dehydrogenase SERP1888; EC=1.1.1.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Putative 2-hydroxyacid dehydrogenase SERP1888 n=30 Tax=Staphylococcus epidermidis RepID=Y1888_STAEQ
64_002_scaffold_228_9
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6736..7860)
DNA (1125bp) protein (375aa)
Salicylate hydroxylase (EC:1.14.13.1)
FAD binding domain protein n=12 Tax=Staphylococcus epidermidis RepID=F3SV29_STAEP
Monooxygenase {ECO:0000313|EMBL:ETJ12242.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_002_scaffold_228_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8002..8139
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=C5QCE8_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW55199.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_228_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8243..9019)
DNA (777bp) protein (259aa)
Autolysin (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase, family 4 n=38 Tax=Staphylococcus epidermidis RepID=Q5HLU1_STAEQ
N-acetylmuramoyl-L-alanine amidase, family 4 {ECO:0000313|EMBL:AAW55206.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_228_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9041..9316)
DNA (276bp) protein (92aa)
Uncharacterized protein n=53 Tax=Staphylococcus epidermidis RepID=Q5HLU0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE57925.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9950..10900)
DNA (951bp) protein (317aa)
Lyt divergon expression attenuator LytR n=44 Tax=Staphylococcus epidermidis RepID=Q8CNB5_STAES
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 (as in PMID19099556)
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EFE57924.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11089..11904)
DNA (816bp) protein (272aa)
Inositol monophosphatase family protein n=21 Tax=Staphylococcus epidermidis RepID=H3UII1_STAEP
Inositol monophosphatase family protein
Inositol monophosphatase family protein {ECO:0000313|EMBL:EFE57923.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12333..13022
DNA (690bp) protein (230aa)
Transcriptional regulator, DeoR family n=39 Tax=Staphylococcus epidermidis RepID=Q5HLT7_STAEQ
DeoR family regulatory protein
HTH domain protein {ECO:0000313|EMBL:EFE57922.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13201..13947)
DNA (747bp) protein (249aa)
Abortive infection family protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HLT6_STAEQ
Protein of pXO2-46
Abortive infection family protein {ECO:0000313|EMBL:AAW55211.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_228_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13999..14334
DNA (336bp) protein (112aa)
Uncharacterized protein n=34 Tax=Staphylococcus epidermidis RepID=Q8CRE1_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW55212.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_228_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14484..15566
DNA (1083bp) protein (361aa)
Uncharacterized protein n=10 Tax=Staphylococcus epidermidis RepID=C5QCE0_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES34970.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Outer surface protein of unknown function,cellobiose operon
64_002_scaffold_228_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15563..16450
DNA (888bp) protein (296aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000255|HAMAP-Rule:MF_00068}; Short=MurNAc-6-P etherase {ECO:0000255|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000255|HAMAP-Rule:MF_00068};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000255|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000255|HAMAP-Rule:MF_00068}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
N-acetylmuramic acid 6-phosphate etherase n=34 Tax=Staphylococcus epidermidis RepID=MURQ_STAEQ rbh
murQ; N-acetylmuramic acid-6-phosphate etherase
64_002_scaffold_228_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16463..17887
DNA (1425bp) protein (475aa)
PTS system, IIB component / PTS system, IIC component (EC:2.7.1.69)
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EFE57916.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFE57916.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
PTS system EIIBC component SERP1900 n=26 Tax=Staphylococcus epidermidis RepID=PTXBC_STAEQ rbh
64_002_scaffold_228_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18006..18773
DNA (768bp) protein (256aa)
Phosphosugar-binding transcriptional regulator, RpiR family n=30 Tax=Staphylococcus epidermidis RepID=Q5HLT1_STAEQ
RpiR family phosphosugar-binding transcriptional regulator
Phosphosugar-binding transcriptional regulator, RpiR family {ECO:0000313|EMBL:AAW55222.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_228_22
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18896..20272)
DNA (1377bp) protein (459aa)
Amino acid permease n=32 Tax=Staphylococcus epidermidis RepID=Q5HLT0_STAEQ
Amino acid permease
APC family proline transporter ProY {ECO:0000313|EMBL:ETJ10778.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_002_scaffold_228_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20671..21027
DNA (357bp) protein (119aa)
Uncharacterized protein n=24 Tax=Staphylococcus epidermidis RepID=Q5HLS8_STAEQ
Hypothetical protein SAV2317
Uncharacterized protein {ECO:0000313|EMBL:EFE57913.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21024..21209
DNA (186bp) protein (62aa)
Uncharacterized protein n=57 Tax=Staphylococcus epidermidis RepID=Q5HLS7_STAEQ
Hypothetical protein SAV2318
Uncharacterized protein {ECO:0000313|EMBL:EFE57912.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21526..21714)
DNA (189bp) protein (63aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=Q5HLS6_STAEQ
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EFE57940.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21732..22367)
DNA (636bp) protein (212aa)
Hydrolase, haloacid dehalogenase-like family n=13 Tax=Staphylococcus epidermidis RepID=Q5HLS5_STAEQ
HAD superfamily hydrolase
Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:AAW55234.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_228_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22668..23198
DNA (531bp) protein (177aa)
Uncharacterized protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HLS4_STAEQ
Hypothetical protein SAV2322
Uncharacterized protein {ECO:0000313|EMBL:EFE57938.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_228_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23303..24892)
DNA (1590bp) protein (530aa)
PTS system, IIBC components n=40 Tax=Staphylococcus epidermidis RepID=Q5HLS3_STAEQ
PTS system, IIBC components
PTS system, IIBC components {ECO:0000313|EMBL:AAW55236.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_228_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25090..25851
DNA (762bp) protein (254aa)
Phosphosugar-binding transcriptional regulator n=61 Tax=Staphylococcus epidermidis RepID=Q5HLS2_STAEQ
Transcriptional regulator, RpiR family
SIS domain protein {ECO:0000313|EMBL:EES34991.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Displaying 29 items

View Taxonomy