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64_002_scaffold_155_15

Organism: 64_002_Staphylococcus_epidermidis_32_63

near complete RP 50 / 55 MC: 6 BSCG 50 / 51 ASCG 13 / 38
Location: comp(15115..18615)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000255|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000255|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000255|HAMAP-Rule:MF_00969};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 1166.0
  • Bit_score: 2288
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=Staphylococcus epidermidis RepID=J0GII7_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1166.0
  • Bit_score: 2294
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 1166.0
  • Bit_score: 2290
  • Evalue 0.0

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3501
ATGATTGCAAATTACATTAGCGAAGATAATCGTTTTCAAGAATTAGATGAAGTCTTCGGCCAAGAGAATATTTTAGTTACGGGATTATCCCCGTCAGCGAAGGCAACAATTATTGCTGAAAAATATTTAAAAGATCATAAACAAATGCTACTCGTAACTAATAATTTATACCAAGCAGATAAAATCGAAACTGACATTTTACAATATGTAGATGACTCAGAAGTTTATAAATATCCTGTTCAAGATATAATGACTGAAGAGTTTTCTACTCAAAGTCCACAATTGATGAGTGAGCGTGTTAGAACGTTGACTGCGTTAGCCCAAGGCGAAAAAGGGTTATTTATTGTGCCTTTAAACGGCTTTAAAAAATGGCTAACACCGGTTGATTTATGGAAAGATCATCAAATGACGCTTAAAGTAGGTCAGGATATTGATGTTGATGCGTTCTTAAATAAATTAGTTAATATGGGTTATCGTCGAGAAAGTGTAGTGTCACATATTGGTGAGTTTTCATTGCGTGGTGGAATCATAGATATATATCCGTTGATAGGAACACCTGTGAGAATAGAGCTATTTGATACTGAAGTTGATTCCATCAGAGACTTTGATGTAGAAACACAACGTTCTAACGATAATATAAATCAAGTTGAAATCACAACAGCTAGTGACTACATTATTACTGATGAAGTGATACAACACTTACAAAATGAACTTAAAAAAGCATATGAATATACACGCCCTAAAATTGAAAAGTCCGTACGTAATGATTTAAAAGAGACATATGAAAGTTTTAAGTTGTTTGAATCTACCTTTTTCGATCATCAATTGTTACGACGTCTTGTTTCATTTATGTATGAAAAACCATCAACCCTTATTGACTATTTTCAAAAAAACGCGATTATTGTAGTTGATGAGTTTAATCGTATTAAGGAAACAGAAGAAACACTTACAACAGAAGTTGAAGATTTTATGAGTAACTTAATTGAGAGTGGAAATGGATTTATCGGACAAGGATTTATGAAGTATGAAAGTTTTGACGCATTATTAGAGCAACATGCCGTTGCATATTTCACATTATTTACATCTTCGATGCAAGTACCATTACAACATATTATTAAGTTCTCTTGTAAACCAGTTCAACAATTTTATGGTCAATATGACATTATGCGCTCGGAATTTCAAAGATACGTGCATCAAGATTACACTGTCGTAGTTCTTGTTGAAACTGAAACAAAAGTTGAACGTATTCAATCAATGCTTAATGAAATGCATATTCCAACAGTATCAAATATTCACGAAGATATTGATGGTGGTCAAGTTGTAGTGACGGAAGGTAGTCTTTCTGAAGGCTTTGAATTACCTTATATGCAGTTGGTAGTCATCACAGAAAGAGAATTATTTAAAACAAGACAAAAGAAACAACGTAAACGAACAAAAACGATTTCTAATGCTGAAAAAATAAAATCATATCAAGACCTAAATGTGGGCGATTATATAGTGCATGTGCATCATGGTGTCGGACGATACTTAGGTGTCGAAACACTAGAAGTTGGAGATACACATCGCGACTATATTAAATTGCAATATAAAGGAACTGATCAATTATTCGTTCCAGTTGATCAAATGGATCAAGTTCAAAAGTATGTGGCTTCTGAAGATAAGTCGCCTAGATTAAATAAATTAGGCGGGACAGAATGGAAAAAAACAAAGGCGAAAGTTCAACAAAGTGTTGAAGATATAGCTGATGAATTAATTGATTTGTATAAAGAACGTGAAATGTCTGTAGGTTATCAATACGGCCAAGATACTGCAGAGCAATCAGCATTTGAGCATGATTTTCCATATGAATTAACACCCGATCAAAGTAAGTCAATCGATGAAATTAAAGGTGACATGGAAAGAGCAAGACCTATGGACCGTCTTCTTTGTGGTGATGTGGGATATGGTAAAACTGAAGTGGCTGTCCGCGCAGCGTTTAAAGCTGTCATGGATGGTAAGCAAGTTGCGTTTTTAGTACCAACAACGATTCTTGCACAACAACACTACGAAACACTACTTGAACGTATGCAAGATTTTCCGGTCGAAATTCAATTGGTAAGTCGATTCCGCACAGCTAAAGAAATAAGGGAAACTAAAGAAGGGCTCAAATCAGGATATGTTGACATTGTCGTAGGTACACATAAATTATTAGGTAAAGATATTCAATATAAAGATTTGGGATTGCTTATTGTTGATGAAGAACAACGTTTTGGAGTGCGACATAAAGAACGCATTAAAACTTTGAAAAAAAACGTTGATGTACTGACGCTTACTGCAACACCAATACCAAGAACATTGCATATGAGTATGTTAGGTGTACGTGACTTATCAGTGATTGAAACACCACCTGAAAATCGTTTTCCTGTACAAACTTATGTCTTAGAACAGAATACGAACTTTATTAAAGAGGCATTAGAGCGTGAATTATCTCGCGATGGACAAGTATTTTATTTGTATAACAAAGTGCAGTCTATTTATGAAAAAAGAGAACAACTTCAAATGTTAATGCCTGACGCTAACATTGCTGTAGCACATGGCCAAATGACTGAACGTGATTTAGAGGAAACAATGTTAAGCTTTATTAATCACGAGTACGATATTTTAGTAACGACTACAATTATTGAAACAGGTGTAGATGTACCAAATGCTAATACTTTAATCATAGAAGAGGCTGATCGTTTTGGTTTAAGCCAGCTATACCAATTAAGAGGACGTGTAGGACGTTCAAGTAGAATTGGTTACGCTTATTTCTTACATCCAGCTAACAAAGTGTTAAATGAGACTGCTGAAGAGCGATTGCAAGCTATTAAGGAGTTTACCGAACTAGGTTCAGGTTTTAAAATCGCTATGCGAGATTTAAATATTCGTGGTGCAGGCAATTTACTCGGTAAGCAACAACATGGCTTTATTGATTCGGTTGGTTTCGATTTATACTCTCAAATGTTAGAAGAAGCAGTAAACGAAAAACGTGGCATTAAAGAAAAATCGCCGGATGCACCAGATATTGAAGTTGAATTGCACTTAGATGCTTATTTACCAGCTGAATATATACAAAGTGAACAGGCTAAAATTGAGATTTATAAAAAACTTCGAAAAGTAGAAACAGAAGAACAACTTTTCGATGTCAAAAATGAATTAATAGATCGTTTTAATGATTATCCAATTGAAGTCGAACGATTATTAGACATTGTTGAAATCAAAGTCCACGCTCTACATGCGGGTGTCGAATTGATAAAAGACAAAGGCAAATCTATACAAATCATTTTATCACCTAAAGCGACTGAAGATATTAATGGAGAAGAATTGTTTAAACAGACGCAACCTCTTGGTAGAGCAATGAAAGTTGGCGTGCAAAATAATGCAATGAATGTAACGCTAACAAAATCAAAACAATGGTTAGATAGTTTGAAATTCTTAGTTAGATGTATTGAAGAAAGTATGGCGATTAAAGATGAAGACTAA
PROTEIN sequence
Length: 1167
MIANYISEDNRFQELDEVFGQENILVTGLSPSAKATIIAEKYLKDHKQMLLVTNNLYQADKIETDILQYVDDSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTALAQGEKGLFIVPLNGFKKWLTPVDLWKDHQMTLKVGQDIDVDAFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGTPVRIELFDTEVDSIRDFDVETQRSNDNINQVEITTASDYIITDEVIQHLQNELKKAYEYTRPKIEKSVRNDLKETYESFKLFESTFFDHQLLRRLVSFMYEKPSTLIDYFQKNAIIVVDEFNRIKETEETLTTEVEDFMSNLIESGNGFIGQGFMKYESFDALLEQHAVAYFTLFTSSMQVPLQHIIKFSCKPVQQFYGQYDIMRSEFQRYVHQDYTVVVLVETETKVERIQSMLNEMHIPTVSNIHEDIDGGQVVVTEGSLSEGFELPYMQLVVITERELFKTRQKKQRKRTKTISNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGDTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPRLNKLGGTEWKKTKAKVQQSVEDIADELIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMERARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVEIQLVSRFRTAKEIRETKEGLKSGYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKKNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINHEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLNETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIKEKSPDAPDIEVELHLDAYLPAEYIQSEQAKIEIYKKLRKVETEEQLFDVKNELIDRFNDYPIEVERLLDIVEIKVHALHAGVELIKDKGKSIQIILSPKATEDINGEELFKQTQPLGRAMKVGVQNNAMNVTLTKSKQWLDSLKFLVRCIEESMAIKDED*