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64_002_scaffold_155

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_002_scaffold_155_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(560..2047)
DNA (1488bp) protein (496aa)
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00252}; EC=6.1.1.6 {ECO:0000255|HAMAP-Rule:MF_00252};; Lysyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00252}; Short=LysRS {ECO:0000255|HAMAP-Rule:MF_00252};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Lysine--tRNA ligase n=52 Tax=Staphylococcus epidermidis RepID=SYK_STAEQ rbh
64_002_scaffold_155_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2383..2862)
DNA (480bp) protein (160aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EES37293.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EES37293.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=53 Tax=Staphylococcus epidermidis RepID=Q5HRN8_STAEQ
64_002_scaffold_155_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2863..3228)
DNA (366bp) protein (122aa)
Dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase {ECO:0000313|EMBL:EES37292.1}; EC=4.1.2.25 {ECO:0000313|EMBL:EES37292.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Dihydroneopterin aldolase n=78 Tax=Staphylococcus epidermidis RepID=FOLB_STAEQ
64_002_scaffold_155_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3206..4024)
DNA (819bp) protein (273aa)
Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Dihydropteroate synthase n=6 Tax=Staphylococcus epidermidis RepID=H3UYC4_STAEP
64_002_scaffold_155_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4320..5252)
DNA (933bp) protein (311aa)
Cysteine synthase (EC:2.5.1.47)
Cysteine synthase; Short=CSase;; EC=2.5.1.47;; O-acetylserine (thiol)-lyase; Short=OAS-TL;; O-acetylserine sulfhydrylase; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Cysteine synthase n=77 Tax=Staphylococcus epidermidis RepID=CYSK_STAEQ rbh
64_002_scaffold_155_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5589..6470)
DNA (882bp) protein (294aa)
33 kDa chaperonin n=59 Tax=Staphylococcus epidermidis RepID=HSLO_STAEQ rbh
Chaperonin (heat shock protein 33)
33 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00117}; Heat shock protein 33 homolog {ECO:0000255|HAMAP-Rule:MF_00117}; Short=HSP33 {ECO:0000255|HAMAP-Rule:MF_00117};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_155_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6725..8827)
DNA (2103bp) protein (701aa)
Cell division protein FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
ATP-dependent zinc metalloprotease FtsH n=51 Tax=Staphylococcus epidermidis RepID=Q5HRP3_STAEQ
64_002_scaffold_155_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9102..9641)
DNA (540bp) protein (180aa)
Hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EES37287.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EES37287.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Hypoxanthine-guanine phosphoribosyltransferase n=57 Tax=Staphylococcus epidermidis RepID=HPRT_STAEQ rbh
64_002_scaffold_155_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9641..10939)
DNA (1299bp) protein (433aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
tRNA(Ile)-lysidine synthase n=33 Tax=Staphylococcus epidermidis RepID=TILS_STAEQ rbh
tRNA(Ile)-lysidine synthetase
64_002_scaffold_155_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11217..11618)
DNA (402bp) protein (134aa)
General stress protein 13 n=33 Tax=Staphylococcus epidermidis RepID=Q5HRP7_STAEQ
RNA binding protein, contains ribosomal protein S1 domain
S1 RNA binding domain protein {ECO:0000313|EMBL:EFE60103.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_155_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11712..12113)
DNA (402bp) protein (134aa)
Cell-division protein DivIC, putative n=53 Tax=Staphylococcus epidermidis RepID=Q5HRP8_STAEQ
cell-division initiation protein
Septum formation initiator {ECO:0000313|EMBL:EFE60102.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_155_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12137..12400)
DNA (264bp) protein (88aa)
S4 domain protein n=62 Tax=Staphylococcus epidermidis RepID=Q5HRP9_STAEQ
S4 domain protein
S4 domain protein {ECO:0000313|EMBL:EES37283.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_002_scaffold_155_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12397..13587)
DNA (1191bp) protein (397aa)
Tetrapyrrole methylase family protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HRQ0_STAEQ
tetrapyrrole methylase
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EFE60100.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_155_14

Not on your lists

comp(13584..15125)
DNA (1542bp) protein (514aa)
Polysaccharide biosynthesis protein n=19 Tax=Staphylococcus epidermidis RepID=D1WL67_STAEP
polysaccharide biosynthesis protein
Virulence factor MVIN {ECO:0000313|EMBL:ETJ21239.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_155_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15115..18615)
DNA (3501bp) protein (1167aa)
Transcription-repair-coupling factor {ECO:0000255|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000255|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000255|HAMAP-Rule:MF_00969};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Transcription-repair-coupling factor n=2 Tax=Staphylococcus epidermidis RepID=J0GII7_STAEP
mfd; transcription-repair coupling factor
64_002_scaffold_155_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18621..19193)
DNA (573bp) protein (191aa)
Peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Peptidyl-tRNA hydrolase n=55 Tax=Staphylococcus epidermidis RepID=PTH_STAEQ rbh
64_002_scaffold_155_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(19446..20105)
DNA (660bp) protein (220aa)
50S ribosomal protein L25 n=48 Tax=Staphylococcus epidermidis RepID=RL25_STAEQ
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_002_scaffold_155_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20275..21240)
DNA (966bp) protein (322aa)
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ribose-phosphate pyrophosphokinase n=83 Tax=Staphylococcus epidermidis RepID=KPRS_STAEQ rbh
64_002_scaffold_155_19

Not on your lists

comp(21384..22739)
DNA (1356bp) protein (452aa)
N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase (EC:2.7.7.23)
Bifunctional protein GlmU n=47 Tax=Staphylococcus epidermidis RepID=GLMU_STAEQ rbh
Bifunctional protein GlmU {ECO:0000313|EMBL:ETJ21234.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_155_20
Staphylococcus capitis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23349..23657)
DNA (309bp) protein (103aa)
Putative septation protein SpoVG n=84 Tax=Staphylococcus RepID=SP5G_STAEQ
spoVG; regulatory protein SpoVG
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1296619 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus capitis CR01.;"
64_002_scaffold_155_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23717..24097)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP, putative n=65 Tax=Staphylococcus epidermidis RepID=Q5HRQ8_STAEQ
Endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ESV18571.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_002_scaffold_155_22

Not on your lists

comp(24119..24943)
DNA (825bp) protein (275aa)
Pur operon repressor n=48 Tax=Staphylococcus epidermidis RepID=Q5HRQ9_STAEQ
purR; pur operon repressor
Purine operon repressor {ECO:0000313|EMBL:ETJ21231.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_155_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24958..25806)
DNA (849bp) protein (283aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=49 Tax=Staphylococcus epidermidis RepID=ISPE_STAEQ rbh
64_002_scaffold_155_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26199..26462)
DNA (264bp) protein (88aa)
Uncharacterized protein n=85 Tax=Staphylococcus RepID=Q5HRR1_STAEQ
Veg protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53477.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_002_scaffold_155_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(26562..27452)
DNA (891bp) protein (297aa)
Dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ribosomal RNA small subunit methyltransferase A n=48 Tax=Staphylococcus epidermidis RepID=RSMA_STAEQ rbh
64_002_scaffold_155_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27453..27998)
DNA (546bp) protein (182aa)
Ribonuclease M5 (EC:3.1.26.8)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Ribonuclease M5 n=51 Tax=Staphylococcus epidermidis RepID=Q5HRR3_STAEQ
64_002_scaffold_155_27

Not on your lists

comp(28205..28978)
DNA (774bp) protein (258aa)
Hydrolase, TatD family n=15 Tax=Staphylococcus RepID=C5Q656_STAEP
TatD deoxyribonuclease {ECO:0000313|EMBL:ETJ21226.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Putative deoxyribonuclease YcfH
64_002_scaffold_155_28

Not on your lists


comp(29003..30973)
DNA (1971bp) protein (657aa)
Methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=14 Tax=Staphylococcus epidermidis RepID=C5Q655_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ21225.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_002_scaffold_155_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31183..32022)
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Ribosomal RNA small subunit methyltransferase I n=45 Tax=Staphylococcus epidermidis RepID=Q5HRR6_STAEQ
tetrapyrrole family methyltransferase
64_002_scaffold_155_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32024..32272)
DNA (249bp) protein (83aa)
UPF0213 protein SERP0126 n=52 Tax=Staphylococcus epidermidis RepID=Y126_STAEQ
COG2827: putative endonuclease containing a URI domain
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EFE60083.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 38 in total

View Taxonomy