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64_003_scaffold_7

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Displaying items 1-30 of 339 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_7_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(96..1202)
DNA (1107bp) protein (369aa)
Capsular polysacharride biosynthesis protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CY79_CITFR
Capsular biosynthesis protein {ECO:0000313|EMBL:KJC12904.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putative capsular polysaccharide bisynthesis protein
64_003_scaffold_7_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1199..2410)
DNA (1212bp) protein (404aa)
Sensor protein UhpB n=4 Tax=Citrobacter RepID=J0M013_9ENTR
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:KEL78480.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
putative capsular polysaccharide bisynthesis protein
64_003_scaffold_7_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2407..4536)
DNA (2130bp) protein (710aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QRR2_CITFR
Capsular biosynthesis protein {ECO:0000313|EMBL:KJC07321.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lipopolysaccharide biosynthesis protein
64_003_scaffold_7_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4539..5096)
DNA (558bp) protein (186aa)
Polysaccharide biosynthesis export protein n=6 Tax=Citrobacter RepID=J0M6J7_9ENTR
Capsular biosynthesis protein {ECO:0000313|EMBL:KJC07322.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
64_003_scaffold_7_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5098..6384)
DNA (1287bp) protein (429aa)
Putative capsular polysaccharide biosynthesis protein n=2 Tax=Citrobacter freundii RepID=K8QN22_CITFR
Capsular biosynthesis protein {ECO:0000313|EMBL:KJC07323.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putative capsular polysaccharide biosynthesis protein
64_003_scaffold_7_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6374..7789)
DNA (1416bp) protein (472aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CY82_CITFR
UDP-phosphate glucose phosphotransferase {ECO:0000313|EMBL:KJC12909.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
undecaprenyl-phosphate glucose phosphotransferase; K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase
64_003_scaffold_7_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8830..9417
DNA (588bp) protein (196aa)
F17 fimbrial protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWC2_CITFR
F17 fimbrial protein {ECO:0000313|EMBL:KJC12910.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
F17 fimbrial protein; K07345 major type 1 subunit fimbrin (pilin)
64_003_scaffold_7_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9472..10143
DNA (672bp) protein (224aa)
Pili assembly chaperone n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DLN4_CITFR
Pili assembly chaperone {ECO:0000313|EMBL:KJC07328.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pili assembly chaperone
64_003_scaffold_7_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10157..12715
DNA (2559bp) protein (853aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UPE5_9ENTR
Fimbrial assembly protein {ECO:0000313|EMBL:KJC07329.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fimbrial biogenesis outer membrane usher protein
64_003_scaffold_7_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12726..13808
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BFF0_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL78489.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
64_003_scaffold_7_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13801..15252)
DNA (1452bp) protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tricarboxylic transport regulatory protein; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
Tricarboxylic transport regulatory protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CY87_CITFR
64_003_scaffold_7_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15239..15913)
DNA (675bp) protein (225aa)
Transcriptional regulatory protein tctD n=1 Tax=Citrobacter sp. KTE30 RepID=R8UQ77_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC07332.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA-binding response regulator TctD; K07774 two-component system, OmpR family, response regulator TctD
64_003_scaffold_7_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16067..17044
DNA (978bp) protein (326aa)
Tricarboxylic transport n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DLN9_CITFR
Tricarboxylic transport membrane protein {ECO:0000313|EMBL:KJC07333.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tricarboxylic transport; K07795 putative tricarboxylic transport membrane protein
64_003_scaffold_7_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17059..17493
DNA (435bp) protein (145aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1MAH8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13519.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein; K07794 putative tricarboxylic transport membrane protein
64_003_scaffold_7_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17504..19018
DNA (1515bp) protein (505aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SA51_CITFR
Tripartite tricarboxylate transporter TctA {ECO:0000313|EMBL:KJC07335.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K07793 putative tricarboxylic transport membrane protein
64_003_scaffold_7_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19075..20445)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HBY7_CITFR
Membrane protein {ECO:0000313|EMBL:KKC28344.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
diguanylate cyclase
64_003_scaffold_7_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21195..21491
DNA (297bp) protein (99aa)
AFA-III adhesin operon regulatory protein n=1 Tax=Escherichia coli TA271 RepID=F4UWS7_ECOLX
Adhesin biosynthesis transcription regulatory protein {ECO:0000313|EMBL:EFJ88793.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
hypothetical protein
64_003_scaffold_7_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21511..22086
DNA (576bp) protein (192aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC07336.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_7_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22211..22900)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC07337.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_7_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23540..23884
DNA (345bp) protein (115aa)
Major pilu subunit operon regulatory protein PapB n=1 Tax=Edwardsiella tarda C07-087 RepID=M4TN85_EDWTA
Uncharacterized protein {ECO:0000313|EMBL:KKC28345.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
major pilu subunit operon regulatory protein PapB
64_003_scaffold_7_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24191..25168
DNA (978bp) protein (326aa)
Protein CsiD n=2 Tax=Citrobacter freundii RepID=K8QWA8_CITFR
Protein CsiD {ECO:0000256|HAMAP-Rule:MF_01083}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
csiD; carbon starvation induced protein; K15737 protein CsiD
64_003_scaffold_7_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25188..26456
DNA (1269bp) protein (423aa)
L-2-hydroxyglutarate oxidase LhgO {ECO:0000256|HAMAP-Rule:MF_00990}; EC=1.1.3.15 {ECO:0000256|HAMAP-Rule:MF_00990};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
FAD dependent oxidoreductase; K15736 L-2-hydroxyglutarate oxidase [EC:1.1.3.-]
Hydroxyglutarate oxidase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QRP6_CITFR
64_003_scaffold_7_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26480..27928
DNA (1449bp) protein (483aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJC07340.1}; EC=1.2.1.16 {ECO:0000313|EMBL:KJC07340.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
gabD; succinate-semialdehyde dehydrogenase I; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate-semialdehyde dehydrogenase I n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CEQ6_CITFR
64_003_scaffold_7_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27954..29237
DNA (1284bp) protein (428aa)
4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22]
4-aminobutyrate aminotransferase n=2 Tax=Citrobacter RepID=K8QN06_CITFR
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KDF13530.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
64_003_scaffold_7_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29380..30780
DNA (1401bp) protein (467aa)
GABA permease n=3 Tax=Citrobacter RepID=C1MAI6_9ENTR
GABA permease {ECO:0000313|EMBL:ETX70045.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
gamma-aminobutyrate transporter
64_003_scaffold_7_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30826..31512
DNA (687bp) protein (229aa)
DNA-binding transcriptional regulator CsiR n=4 Tax=Citrobacter RepID=J1G3T0_9ENTR
HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEL78502.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcriptional regulator
64_003_scaffold_7_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31525..31974)
DNA (450bp) protein (150aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=J0M6H4_9ENTR
LysM domain/BON superfamily protein {ECO:0000313|EMBL:ETX61926.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
LysM domain/BON superfamily protein
64_003_scaffold_7_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32069..32227)
DNA (159bp) protein (53aa)
UPF0057 membrane protein yqaE n=10 Tax=Enterobacteriaceae RepID=C1MAI9_9ENTR
UPF0057 membrane protein yqaE {ECO:0000313|EMBL:KDF13534.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein
64_003_scaffold_7_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32412..32711
DNA (300bp) protein (100aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1MAJ0_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:ETX61928.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
ArsR family transcriptional regulator
64_003_scaffold_7_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32721..33248
DNA (528bp) protein (176aa)
Rhodanese-like sulfurtransferase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CYA6_CITFR
Membrane protein {ECO:0000313|EMBL:KJC07347.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Rhodanese-like sulfurtransferase
Displaying items 1-30 of 339 in total

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