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64_003_scaffold_19

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Displaying items 1-30 of 119 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_19_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(322..534)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=8 Tax=Enterobacteriaceae RepID=G9S904_CITFR
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
64_003_scaffold_19_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

739..2937
DNA (2199bp) protein (733aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
primosome assembly protein PriA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Primosome assembly protein PriA n=2 Tax=Citrobacter RepID=K8QQF2_CITFR
64_003_scaffold_19_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3265..4119
DNA (855bp) protein (285aa)
Transcriptional repressor CytR n=6 Tax=Citrobacter RepID=J0VNF2_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC07442.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Transcriptional (co)regulator CytR
64_003_scaffold_19_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4318..5187
DNA (870bp) protein (290aa)
Cell division protein ftsN n=2 Tax=Citrobacter RepID=R8UXE7_9ENTR
Cell division protein FtsN {ECO:0000313|EMBL:KJC04015.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cell division protein FtsN; K03591 cell division protein FtsN
64_003_scaffold_19_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5279..5809
DNA (531bp) protein (177aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV n=11 Tax=Enterobacteriaceae RepID=C1MFY6_9ENTR
64_003_scaffold_19_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5819..7150
DNA (1332bp) protein (444aa)
ATP-dependent protease ATPase subunit HslU n=11 Tax=Enterobacteriaceae RepID=C1MFY5_9ENTR
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
64_003_scaffold_19_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7218..8147
DNA (930bp) protein (310aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=6 Tax=Citrobacter RepID=J0M239_9ENTR
64_003_scaffold_19_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8240..8725
DNA (486bp) protein (162aa)
Regulator of ribonuclease activity A n=7 Tax=Enterobacteriaceae RepID=I6HEY6_SHIFL
Regulator of ribonuclease activity A {ECO:0000256|HAMAP-Rule:MF_00471, ECO:0000256|SAAS:SAAS00043861}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
rraA; regulator of ribonuclease activity A; K02553 regulator of ribonuclease activity A
64_003_scaffold_19_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8885..9628
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=Citrobacter RepID=K8QLN4_CITFR
Oxidoreductase {ECO:0000313|EMBL:KJC07436.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
short-chain dehydrogenase/reductase SDR
64_003_scaffold_19_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9831..10070)
DNA (240bp) protein (80aa)
Cell division protein ZapB n=6 Tax=Citrobacter RepID=J1FZQ9_9ENTR
Cell division protein ZapB {ECO:0000256|HAMAP-Rule:MF_01196, ECO:0000256|SAAS:SAAS00064905}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
yiiU; hypothetical protein; K09892 hypothetical protein
64_003_scaffold_19_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10505..11350
DNA (846bp) protein (282aa)
GlpF n=6 Tax=Citrobacter RepID=J0M235_9ENTR
Glycerol uptake facilitator protein {ECO:0000313|EMBL:CDL38467.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
glycerol uptake facilitator protein; K02440 glycerol uptake facilitator protein
64_003_scaffold_19_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11372..12880
DNA (1509bp) protein (503aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glpK; glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=7 Tax=Citrobacter RepID=C1MFY0_9ENTR
64_003_scaffold_19_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13016..14026
DNA (1011bp) protein (337aa)
glpX; fructose 1,6-bisphosphatase II; K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11]
Fructose-1,6-bisphosphatase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3B994_CITFR
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_19_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14122..14868
DNA (747bp) protein (249aa)
Ferredoxin--NADP reductase {ECO:0000313|EMBL:KEL77778.1}; EC=1.18.1.2 {ECO:0000313|EMBL:KEL77778.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
fpr; ferredoxin-NADP reductase (EC:1.18.1.2); K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Ferredoxin-NADP reductase n=3 Tax=Citrobacter RepID=K8QLM9_CITFR
64_003_scaffold_19_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14932..15360)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QNX3_CITFR
Membrane protein {ECO:0000313|EMBL:KJC07431.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_19_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15461..16057
DNA (597bp) protein (199aa)
Periplasmic protein n=5 Tax=Citrobacter RepID=J0M230_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDL38462.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
64_003_scaffold_19_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16057..16167
DNA (111bp) protein (37aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J0VND9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67091.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_19_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16169..16936
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Triosephosphate isomerase; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase n=13 Tax=Enterobacteriaceae RepID=C1MFX5_9ENTR
64_003_scaffold_19_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16976..18448)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UI51_9ENTR
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJC04028.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K03319 divalent anion:Na+ symporter, DASS family
64_003_scaffold_19_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18558..19862)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QLM5_CITFR
Citrate transporter {ECO:0000313|EMBL:KJC04029.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_19_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19936..20685)
DNA (750bp) protein (250aa)
CDP-diacylglycerol pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00319}; EC=3.6.1.26 {ECO:0000256|HAMAP-Rule:MF_00319};; CDP-diacylglycerol phosphatidylhydrolase {ECO:0000256|HAMAP-Rule:MF_00319}; CDP-diglyceride hydrolase {ECO:0000256|HAMAP-Rule:MF_00319}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
CDP-diacylglycerol pyrophosphatase; K01521 CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
CDP-diacylglycerol pyrophosphatase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UJ05_9ENTR
64_003_scaffold_19_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20790..21779)
DNA (990bp) protein (330aa)
Sulfate transporter subunit n=3 Tax=Citrobacter RepID=K8QUX3_CITFR
Sulfate transporter subunit {ECO:0000313|EMBL:KJC04031.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sbp; sulfate-binding protein (sulfate starvation-induced protein 2); K02048 sulfate transport system substrate-binding protein
64_003_scaffold_19_23
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21983..22945)
DNA (963bp) protein (321aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=9 Tax=Citrobacter RepID=J1FZX2_9ENTR
64_003_scaffold_19_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23129..24031)
DNA (903bp) protein (301aa)
Cation-efflux pump FieF n=6 Tax=Citrobacter RepID=J0LVR6_9ENTR
Cation-efflux pump FieF {ECO:0000256|HAMAP-Rule:MF_01425}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fieF; ferrous iron efflux protein F; K13283 ferrous-iron efflux pump FieF
64_003_scaffold_19_25
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24269..24901)
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=U9UXB8_ECOLX
Type VI secretion-associated protein {ECO:0000313|EMBL:EOQ44877.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
hypothetical protein
64_003_scaffold_19_26
Serratia odorifera, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24913..25245)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=U9UXF5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFE97094.1}; TaxID=667129 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia odorifera DSM 4582.;"
hypothetical protein
64_003_scaffold_19_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25347..25589)
DNA (243bp) protein (81aa)
Phage transcriptional activator, Ogr/Delta n=6 Tax=Escherichia coli RepID=E9UEV2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK19173.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Ogr/Delta-like zinc finger
64_003_scaffold_19_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25638..26756)
DNA (1119bp) protein (373aa)
Phage late control protein D protein n=1 Tax=Escherichia coli 2.4168 RepID=I2YCG1_ECOLX
Phage late regulator {ECO:0000313|EMBL:EOW27333.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE108.;"
phage protein D; K06905
64_003_scaffold_19_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26914..28107
DNA (1194bp) protein (398aa)
Putative phage tail sheath protein n=1 Tax=Escherichia coli 2.4168 RepID=I2YCG2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK19175.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
phage tail sheath protein FI; K06907
64_003_scaffold_19_30
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28120..28635
DNA (516bp) protein (172aa)
Phage major tail tube protein n=3 Tax=Enterobacteriaceae RepID=I2YCF4_ECOLX
Phage major tail tube protein {ECO:0000313|EMBL:ESM34627.1}; TaxID=1329845 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae BWH 31.;"
phage contractile tail tube protein, P2 family; K06908
Displaying items 1-30 of 119 in total

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