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64_003_scaffold_32

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Displaying items 1-30 of 175 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_32_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1281)
DNA (1281bp) protein (427aa)
Pyruvate formate-lyase {ECO:0000313|EMBL:CDL37227.1}; EC=2.3.1.54 {ECO:0000313|EMBL:CDL37227.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein; K00656 formate C-acetyltransferase [EC:2.3.1.54]
Formate acetyltransferase 1 n=9 Tax=Citrobacter RepID=C1M9I8_9ENTR
64_003_scaffold_32_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1341..2198)
DNA (858bp) protein (286aa)
Formate transporter n=6 Tax=Citrobacter RepID=J0VVQ7_9ENTR
Formate transporter {ECO:0000313|EMBL:KJC08545.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
focA; formate transporter 1; K06212 formate transporter
64_003_scaffold_32_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2604..4364)
DNA (1761bp) protein (587aa)
30S ribosomal protein S12 methylthiotransferase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UVR5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL82674.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
ycaO; hypothetical protein; K09136 ribosomal protein S12 methylthiotransferase
64_003_scaffold_32_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4501..5193
DNA (693bp) protein (231aa)
Membrane protein YcaP n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DIT4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL82673.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein YcaP
64_003_scaffold_32_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5133..5303
DNA (171bp) protein (57aa)
UPF0702 transmembrane protein ycaP n=4 Tax=Citrobacter RepID=J0M319_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70294.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_32_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5406..6494
DNA (1089bp) protein (363aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
phosphoserine aminotransferase; K00831 phosphoserine aminotransferase [EC:2.6.1.52]
Phosphoserine aminotransferase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CVN5_CITFR
64_003_scaffold_32_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6564..7847
DNA (1284bp) protein (428aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UVY8_9ENTR
64_003_scaffold_32_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7986..8747
DNA (762bp) protein (254aa)
Peptidase M48, Ste24p n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QVN8_CITFR
Metalloprotease {ECO:0000313|EMBL:KJC08541.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
metalloprotease
64_003_scaffold_32_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8919..9602
DNA (684bp) protein (228aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cmk; cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase n=6 Tax=Citrobacter RepID=J0M9U0_9ENTR
64_003_scaffold_32_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9968..11287
DNA (1320bp) protein (440aa)
30S ribosomal protein S1 n=11 Tax=Citrobacter RepID=C1M9J5_9ENTR
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
64_003_scaffold_32_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11447..11731
DNA (285bp) protein (95aa)
Integration host factor subunit beta n=12 Tax=Enterobacteriaceae RepID=C1M9J6_9ENTR
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
ihfB; integration host factor subunit beta
64_003_scaffold_32_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11938..14202
DNA (2265bp) protein (755aa)
Competence protein ComEC n=1 Tax=Citrobacter sp. KTE30 RepID=R8V081_9ENTR
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:KEL82666.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein; K02238 competence protein ComEC
64_003_scaffold_32_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14239..15987
DNA (1749bp) protein (583aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
msbA; lipid transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
Lipid A export permease/ATP-binding protein MsbA n=6 Tax=Citrobacter RepID=J0VVR7_9ENTR
64_003_scaffold_32_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15984..16961
DNA (978bp) protein (326aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; Tetraacyldisaccharide 4'-kinase; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lpxK; tetraacyldisaccharide 4'-kinase; K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
Tetraacyldisaccharide 4'-kinase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1Y0_CITFR
64_003_scaffold_32_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17003..18235
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DIS4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC08695.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K09927 hypothetical protein
64_003_scaffold_32_16
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18287..18469
DNA (183bp) protein (61aa)
UPF0434 protein CSAG_00691 n=12 Tax=Enterobacteriaceae RepID=C1M9K1_9ENTR
UPF0434 protein ycaR {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
hypothetical protein; K09791 hypothetical protein
64_003_scaffold_32_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18466..19212
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase n=5 Tax=Citrobacter RepID=J1G747_9ENTR
64_003_scaffold_32_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19377..20270
DNA (894bp) protein (298aa)
MukF protein n=5 Tax=Citrobacter RepID=J0VVS2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC08531.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_32_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20388..21152)
DNA (765bp) protein (255aa)
Inner membrane protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UVT3_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX70307.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_32_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21288..22091
DNA (804bp) protein (268aa)
Protein smtA n=6 Tax=Citrobacter RepID=C1M9K5_9ENTR
Protein smtA {ECO:0000313|EMBL:KEL82658.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
type 11 methyltransferase; K06219 S-adenosylmethionine-dependent methyltransferase
64_003_scaffold_32_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22084..23406
DNA (1323bp) protein (441aa)
Chromosome partition protein MukF n=3 Tax=Citrobacter RepID=K8R5V4_CITFR
Chromosome partition protein MukF {ECO:0000256|HAMAP-Rule:MF_01803, ECO:0000256|SAAS:SAAS00085357}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
mukF; condesin subunit F; K03633 chromosome partition protein MukF
64_003_scaffold_32_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23387..24091
DNA (705bp) protein (235aa)
Chromosome partition protein MukE n=7 Tax=Citrobacter RepID=C1M9K7_9ENTR
Chromosome partition protein MukE {ECO:0000256|HAMAP-Rule:MF_01802}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
mukE; condesin subunit E; K03804 chromosome partition protein MukE
64_003_scaffold_32_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24091..28551
DNA (4461bp) protein (1487aa)
Chromosome partition protein MukB n=2 Tax=Citrobacter RepID=M3BCQ9_CITFR
Chromosome partition protein MukB {ECO:0000256|HAMAP-Rule:MF_01800, ECO:0000256|SAAS:SAAS00054219}; Structural maintenance of chromosome-related protein {ECO:0000256|HAMAP-Rule:MF_01800}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
mukB; cell division protein MukB; K03632 chromosome partition protein MukB
64_003_scaffold_32_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28797..30548
DNA (1752bp) protein (584aa)
Murein L,D-transpeptidase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1X4_CITFR
Murein L,D-transpeptidase {ECO:0000313|EMBL:KJC08686.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
murein L,D-transpeptidase
64_003_scaffold_32_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30726..31274
DNA (549bp) protein (183aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein n=5 Tax=Citrobacter RepID=J1G702_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70313.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_32_26
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31303..31950
DNA (648bp) protein (216aa)
Hydroxyacylglutathione hydrolase n=7 Tax=Citrobacter RepID=J0M340_9ENTR
Metal-binding protein {ECO:0000313|EMBL:EOQ50550.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
putative metal-binding enzyme YcbL -like protein
64_003_scaffold_32_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32004..33194)
DNA (1191bp) protein (397aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KEL82651.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KEL82651.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
aromatic amino acid aminotransferase; K00813 aspartate aminotransferase [EC:2.6.1.1]
Aspartate aminotransferase n=4 Tax=Citrobacter RepID=J1G756_9ENTR
64_003_scaffold_32_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33378..34454)
DNA (1077bp) protein (359aa)
Outer membrane protein F n=3 Tax=Citrobacter RepID=R8UW15_9ENTR
Porin {ECO:0000313|EMBL:KJC08521.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ompF; outer membrane protein F; K09476 outer membrane pore protein F
64_003_scaffold_32_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35055..36455)
DNA (1401bp) protein (467aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
asnC; asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
Asparagine--tRNA ligase n=5 Tax=Citrobacter RepID=J0M9W0_9ENTR
64_003_scaffold_32_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36623..37825)
DNA (1203bp) protein (401aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase n=3 Tax=Citrobacter RepID=K8QX86_CITFR
Displaying items 1-30 of 175 in total

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