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64_003_scaffold_75

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Displaying items 1-30 of 169 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_75_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..273)
DNA (273bp) protein (91aa)
Elongation factor Tu 1 n=1 Tax=Escherichia coli EPECa12 RepID=I6FWC9_ECOLX
translation elongation factor Tu; K02358 elongation factor Tu
Elongation factor Tu GTP binding domain protein {ECO:0000313|EMBL:EMX35417.1}; Flags: Fragment;; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
64_003_scaffold_75_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(343..1038)
DNA (696bp) protein (232aa)
Elongation factor G n=2 Tax=Citrobacter RepID=R8V0A9_9ENTR
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
translation elongation factor G
64_003_scaffold_75_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1031..1894)
DNA (864bp) protein (288aa)
Elongation factor G n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFM9_SHIFL
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
elongation factor G
64_003_scaffold_75_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1891..2436)
DNA (546bp) protein (182aa)
Elongation factor G n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFM9_SHIFL
translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
64_003_scaffold_75_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2533..3003)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=10 Tax=Enterobacteriaceae RepID=L0LZG5_ENTBF
ribosomal protein S7, bacterial/organelle
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
64_003_scaffold_75_6
Cronobacter universalis, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3166..3468)
DNA (303bp) protein (101aa)
30S ribosomal protein S12 n=7 Tax=Escherichia coli RepID=M8QF24_ECOLX
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1074000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter universalis NCTC 9529.;"
64_003_scaffold_75_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3594..3881)
DNA (288bp) protein (96aa)
Protein TusB n=6 Tax=Citrobacter RepID=G9SBF9_CITFR
Protein TusB {ECO:0000256|HAMAP-Rule:MF_01564, ECO:0000256|SAAS:SAAS00012082}; tRNA 2-thiouridine synthesizing protein B {ECO:0000256|HAMAP-Rule:MF_01564}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
sulfur relay protein TusB/DsrH; K07237 tRNA 2-thiouridine synthesizing protein B
64_003_scaffold_75_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3889..4248)
DNA (360bp) protein (120aa)
Protein TusC n=3 Tax=Citrobacter RepID=K8QVT2_CITFR
Protein TusC {ECO:0000256|HAMAP-Rule:MF_00389}; tRNA 2-thiouridine synthesizing protein C {ECO:0000256|HAMAP-Rule:MF_00389}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sulfur relay protein TusC; K07236 tRNA 2-thiouridine synthesizing protein C
64_003_scaffold_75_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4248..4634)
DNA (387bp) protein (129aa)
Sulfurtransferase TusD {ECO:0000256|HAMAP-Rule:MF_00390}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00390};; tRNA 2-thiouridine synthesizing protein D {ECO:0000256|HAMAP-Rule:MF_00390}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Sulfurtransferase TusD n=6 Tax=Citrobacter RepID=J0M5I5_9ENTR
SBOV35211; sulfurtransferase TusD
64_003_scaffold_75_10
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4634..5356)
DNA (723bp) protein (241aa)
Uncharacterized protein n=13 Tax=Enterobacteriaceae RepID=C1MD22_9ENTR
DNA binding protein
Putative DNA binding protein {ECO:0000313|EMBL:CBG91168.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
64_003_scaffold_75_11
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5524..6342)
DNA (819bp) protein (273aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
FKBP-type peptidyl-prolyl cis-trans isomerase; K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=7 Tax=Enterobacteriaceae RepID=I6HFM2_SHIFL
64_003_scaffold_75_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6575..6793
DNA (219bp) protein (73aa)
Protein SlyX n=11 Tax=Enterobacteriaceae RepID=C1MD24_9ENTR
Protein SlyX {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
slyX; protein SlyX; K03745 SlyX protein
64_003_scaffold_75_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6992..7597)
DNA (606bp) protein (202aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=9 Tax=Enterobacteriaceae RepID=I6HFM0_SHIFL
64_003_scaffold_75_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7638..7838)
DNA (201bp) protein (67aa)
Uncharacterized protein n=9 Tax=Bacteria RepID=C1MD26_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC09024.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
protein YheV
64_003_scaffold_75_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7848..9653)
DNA (1806bp) protein (602aa)
Glutathione-regulated potassium-efflux system protein KefB n=6 Tax=Citrobacter RepID=J1G300_9ENTR
Glutathione-regulated potassium-efflux system protein KefB {ECO:0000256|HAMAP-Rule:MF_01412}; K(+)/H(+) antiporter {ECO:0000256|HAMAP-Rule:MF_01412}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
glutathione-regulated potassium-efflux system protein KefB; K11747 glutathione-regulated potassium-efflux system protein KefB
64_003_scaffold_75_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9653..10204)
DNA (552bp) protein (184aa)
Glutathione-regulated potassium-efflux system ancillary protein KefG n=9 Tax=Citrobacter RepID=C1MD28_9ENTR
Glutathione-regulated potassium-efflux system ancillary protein KefG {ECO:0000256|HAMAP-Rule:MF_01415, ECO:0000256|SAAS:SAAS00009823}; Putative quinone oxidoreductase KefG {ECO:0000256|HAMAP-Rule:MF_01415}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
kefG; glutathione-regulated potassium-efflux system ancillary protein; K11748 glutathione-regulated potassium-efflux system ancillary protein KefG
64_003_scaffold_75_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10337..12238
DNA (1902bp) protein (634aa)
ABC transporter ATP-binding protein n=2 Tax=Citrobacter RepID=R8UP00_9ENTR
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETX67307.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
putative ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3
64_003_scaffold_75_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12348..13838)
DNA (1491bp) protein (497aa)
Nicotinate phosphoribosyltransferase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CRC3_CITFR
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:KJC05359.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nicotinate phosphoribosyltransferase
64_003_scaffold_75_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13853..14713)
DNA (861bp) protein (287aa)
hypothetical protein; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=5 Tax=Citrobacter RepID=J0M5J9_9ENTR
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KJC09020.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_75_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14905..15624
DNA (720bp) protein (240aa)
Nudix-related transcriptional regulator NrtR n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSC5_CITFR
NUDIX hydrolase {ECO:0000313|EMBL:KJC05361.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Nudix-related transcriptional regulator NrtR
64_003_scaffold_75_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15706..16728
DNA (1023bp) protein (341aa)
Hydrolase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3C7I6_CITFR
Hydrolase {ECO:0000313|EMBL:KJC05362.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hydrolase
64_003_scaffold_75_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16725..16943
DNA (219bp) protein (73aa)
UPF0270 protein CSAG_03572 n=10 Tax=Citrobacter RepID=C1MD34_9ENTR
UPF0270 protein TO64_17885 {ECO:0000256|HAMAP-Rule:MF_00690}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K09898 hypothetical protein
64_003_scaffold_75_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16997..17866
DNA (870bp) protein (290aa)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
prkB; phosphoribulokinase (EC:2.7.1.19); K00855 phosphoribulokinase [EC:2.7.1.19]
Phosphoribulokinase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UK55_9ENTR
64_003_scaffold_75_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17965..18369)
DNA (405bp) protein (135aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=K8R4C3_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC09015.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K07397 putative redox protein
64_003_scaffold_75_25
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18676..19308
DNA (633bp) protein (211aa)
cAMP-activated global transcriptional regulator CRP n=796 Tax=cellular organisms RepID=CRP_SALTY
crp; cAMP-regulatory protein; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
cAMP receptor protein {ECO:0000313|EMBL:GAL59309.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
64_003_scaffold_75_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19360..21447
DNA (2088bp) protein (696aa)
Camp-regulatory protein n=3 Tax=Citrobacter RepID=K8ZRS5_9ENTR
YccS/YhfK family integral membrane protein {ECO:0000313|EMBL:ETX67316.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_75_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21543..22760)
DNA (1218bp) protein (406aa)
Acetylornithine/succinyldiaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; Short=DapATase {ECO:0000256|HAMAP-Rule:MF_01107};; Short=Succinyldiaminopimelate transferase {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.17 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
Acetylornithine/succinyldiaminopimelate aminotransferase n=3 Tax=Citrobacter RepID=J1G372_9ENTR
64_003_scaffold_75_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22846..23409)
DNA (564bp) protein (188aa)
Anthranilate synthase component II {ECO:0000313|EMBL:KJC09011.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KJC09011.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
para-aminobenzoate synthase component II; K01664 para-aminobenzoate synthetase component II [EC:2.6.1.85]
Para-aminobenzoate synthase component II n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CRD5_CITFR
64_003_scaffold_75_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23441..24043)
DNA (603bp) protein (201aa)
Cell filamentation protein Fic n=6 Tax=Citrobacter RepID=J0M5L1_9ENTR
Cell filamentation protein Fic {ECO:0000313|EMBL:KJC05370.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fic; cell filamentation protein Fic; K04095 cell filamentation protein
64_003_scaffold_75_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24307..24879)
DNA (573bp) protein (191aa)
peptidyl-prolyl cis-trans isomerase A (rotamase A); K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=11 Tax=Enterobacteriaceae RepID=C1MD43_9ENTR
Peptidylprolyl isomerase {ECO:0000313|EMBL:KJC09009.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Displaying items 1-30 of 169 in total

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