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64_003_scaffold_104

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_104_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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118..633
DNA (516bp) protein (172aa)
Mg(2+) transport ATPase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D0Z6_CITFR
Magnesium transporter ATPase {ECO:0000313|EMBL:KJC05083.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
64_003_scaffold_104_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(824..1354)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BI40_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05084.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
yhiF; hypothetical protein
64_003_scaffold_104_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1467..2357
DNA (891bp) protein (297aa)
Helix-turn-helix domain-containing protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CH79_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05085.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putative AraC family transcriptional regulator
64_003_scaffold_104_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2470..3009
DNA (540bp) protein (180aa)
Nucleoprotein/polynucleotide-associated enzyme n=2 Tax=Citrobacter RepID=K8QSI6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05086.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_104_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3115..4362)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0X1_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC05087.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K08476 two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
64_003_scaffold_104_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4352..6361)
DNA (2010bp) protein (670aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K08475 two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D0Z0_CITFR
64_003_scaffold_104_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6358..7620)
DNA (1263bp) protein (421aa)
Phosphoglycerate transport regulatory protein pgtC n=2 Tax=Citrobacter RepID=R8UT99_9ENTR
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC07984.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K08478 phosphoglycerate transport regulatory protein PgtC
64_003_scaffold_104_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7973..9364
DNA (1392bp) protein (464aa)
Phosphoglycerate transporter protein PgtP n=2 Tax=Citrobacter RepID=K8QX60_CITFR
Phosphoglycerate transporter {ECO:0000313|EMBL:KJC07879.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
phosphoglycerate transporter protein PgtP
64_003_scaffold_104_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9471..9713)
DNA (243bp) protein (81aa)
Inner membrane protein n=6 Tax=Citrobacter RepID=J0LVX5_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC05090.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_104_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10154..11074
DNA (921bp) protein (307aa)
Lipid A biosynthesis palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; EC=2.3.1.242 {ECO:0000256|HAMAP-Rule:MF_01943};; Kdo(2)-lipid IV(A) palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lpxP; palmitoleoyl acyltransferase (EC:2.3.1.-); K12974 palmitoleoyl transferase [EC:2.3.1.-]
Lipid A biosynthesis palmitoleoyl acyltransferase n=2 Tax=Citrobacter RepID=M3DQD5_CITFR
64_003_scaffold_104_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11116..11718)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QNW6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX69726.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_104_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12214..13452)
DNA (1239bp) protein (413aa)
aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-]
Aminotransferase n=6 Tax=Citrobacter RepID=J0M294_9ENTR
Aminotransferase {ECO:0000313|EMBL:ETX69727.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_003_scaffold_104_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13840..15537
DNA (1698bp) protein (566aa)
hypothetical protein; K02478 two-component system, LytT family, sensor kinase [EC:2.7.13.3]
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=M3CH69_CITFR
Inner membrane protein ypdA {ECO:0000313|EMBL:ETX69728.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_003_scaffold_104_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15552..16286
DNA (735bp) protein (245aa)
Protein mrkE n=1 Tax=Citrobacter sp. KTE30 RepID=R8USH5_9ENTR
LytTR family transcriptional regulator {ECO:0000313|EMBL:KJC05095.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K02477 two-component system, LytT family, response regulator
64_003_scaffold_104_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16302..17165
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0W2_CITFR
AraC family transcriptional regulator {ECO:0000313|EMBL:KJC05096.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_104_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17203..17586)
DNA (384bp) protein (128aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=J0VNK8_9ENTR
Cupin {ECO:0000313|EMBL:KJC05097.2}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_104_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17964..20459)
DNA (2496bp) protein (832aa)
hypothetical protein; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]; K11189 phosphocarrier protein; K11201 PTS system, fructose-specific IIA-like component [EC:2.7.1.69]
Mulitfunctional phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system fructose-like transporter subunit IIA n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQY8_CITFR
PTS fructose transporter subunit IIA {ECO:0000313|EMBL:KJC05098.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_104_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20483..21523)
DNA (1041bp) protein (347aa)
Aminopeptidase ypdE n=1 Tax=Citrobacter sp. KTE30 RepID=R8UT80_9ENTR
Aminopeptidase {ECO:0000313|EMBL:KKC28338.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
exoaminopeptidase
64_003_scaffold_104_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21523..22608)
DNA (1086bp) protein (362aa)
aminopeptidase; K08326 aminopeptidase [EC:3.4.11.-]
Aminopeptidase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DPA5_CITFR
Aminopeptidase {ECO:0000313|EMBL:KJC04955.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_104_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22626..23873)
DNA (1248bp) protein (416aa)
Fructose-like permease IIC component n=6 Tax=Citrobacter RepID=J1G043_9ENTR
PTS fructose transporter subunit IIC {ECO:0000313|EMBL:KJC07890.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K11203 PTS system, fructose-specific IIC-like component
64_003_scaffold_104_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23894..24220)
DNA (327bp) protein (109aa)
Fructose-like phosphotransferase enzyme IIB component 1 {ECO:0000313|EMBL:KEL80819.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KEL80819.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
enzyme IIB component of PTS; K11202 PTS system, fructose-specific IIB-like component [EC:2.7.1.69]
PTS system, Fru family, IIB component n=11 Tax=Enterobacteriaceae RepID=D4B728_9ENTR
64_003_scaffold_104_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24411..25376)
DNA (966bp) protein (322aa)
Glucokinase {ECO:0000313|EMBL:BAO18591.1}; EC=2.7.1.2 {ECO:0000313|EMBL:KJC07892.1};; Flags: Fragment;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glk; glucokinase; K00845 glucokinase [EC:2.7.1.2]
Glucokinase n=8 Tax=Citrobacter RepID=C1M795_9ENTR
64_003_scaffold_104_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25581..26816
DNA (1236bp) protein (412aa)
Putative ion-transport protein WYG_3107 n=3 Tax=Citrobacter RepID=J1FZX8_9ENTR
Putative ion-transport protein TN42_17710 {ECO:0000256|HAMAP-Rule:MF_01115}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_104_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26817..28469)
DNA (1653bp) protein (551aa)
Indole-3-pyruvate decarboxylase {ECO:0000313|EMBL:KEL80816.1}; EC=4.1.1.74 {ECO:0000313|EMBL:KEL80816.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein; K04103 indolepyruvate decarboxylase [EC:4.1.1.74]
Indolepyruvate decarboxylase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSG8_CITFR
64_003_scaffold_104_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28651..29640
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3DQC4_CITFR
Putative oxidoreductase {ECO:0000313|EMBL:KEL80815.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_003_scaffold_104_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29778..30110
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QNV4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC07896.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
protein ypeC
64_003_scaffold_104_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30143..31381)
DNA (1239bp) protein (413aa)
Divalent metal cation transporter MntH n=6 Tax=Citrobacter RepID=J0M2A9_9ENTR
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
manganese transport protein MntH; K03322 manganese transport protein
64_003_scaffold_104_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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31725..32927
DNA (1203bp) protein (401aa)
Nucleoside permease n=6 Tax=Citrobacter RepID=J1FZY3_9ENTR
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Nucleoside permease NupC
64_003_scaffold_104_trna_5
unknown

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comp(33075..33147)
DNA (73bp)
transferRNA Ala
64_003_scaffold_104_trna_4
unknown

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comp(33193..33265)
DNA (73bp)
transferRNA Ala
Displaying items 1-30 of 43 in total

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