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64_003_scaffold_144

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_144_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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224..904
DNA (681bp) protein (227aa)
Oligogalacturonate-specific porin n=6 Tax=Citrobacter RepID=K8QNY6_CITFR
Oligogalacturonate-specific porin family protein {ECO:0000313|EMBL:KEL77793.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_003_scaffold_144_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

983..2407
DNA (1425bp) protein (475aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QLP2_CITFR
Sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein {ECO:0000313|EMBL:KEL77794.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein; K03292 glycoside/pentoside/hexuronide:cation symporter, GPH family
64_003_scaffold_144_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2460..2777)
DNA (318bp) protein (106aa)
Met repressor n=7 Tax=Enterobacteriaceae RepID=I6HEX5_SHIFL
Met repressor {ECO:0000256|HAMAP-Rule:MF_00744, ECO:0000256|SAAS:SAAS00012444}; Met regulon regulatory protein MetJ {ECO:0000256|HAMAP-Rule:MF_00744}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator of met regulon
64_003_scaffold_144_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3042..4202
DNA (1161bp) protein (387aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:KJC04008.1}; EC=2.5.1.48 {ECO:0000313|EMBL:KJC04008.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
metB; cystathionine gamma-synthase, PLP-dependent (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48]
Cystathionine gamma-synthase, PLP-dependent n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3C872_CITFR
64_003_scaffold_144_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4205..6637
DNA (2433bp) protein (811aa)
metL; bifunctional aspartate kinase II/homoserine dehydrogenase II; K12525 bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
Bifunctional aspartokinase/homoserine dehydrogenase 2 n=5 Tax=Citrobacter RepID=J1FZS4_9ENTR
Bifunctional aspartokinase/homoserine dehydrogenase 2 {ECO:0000313|EMBL:ETX67112.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_003_scaffold_144_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6673..7848)
DNA (1176bp) protein (392aa)
Cytoplasmic protein n=3 Tax=Citrobacter RepID=K8ZKE3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67113.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Putative cytoplasmic protein
64_003_scaffold_144_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7982..9538
DNA (1557bp) protein (519aa)
5'-nucleotidase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CRX4_CITFR
5'-nucleotidase {ECO:0000313|EMBL:ETX67114.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_144_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9577..9954)
DNA (378bp) protein (126aa)
hypothetical protein; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
Carboxymuconolactone decarboxylase n=5 Tax=Citrobacter RepID=J0VNG2_9ENTR
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:KEL77800.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
64_003_scaffold_144_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10044..10952
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UMV4_9ENTR
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC04004.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_144_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11110..11997
DNA (888bp) protein (296aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
metF; 5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase n=6 Tax=Citrobacter RepID=J1FZS9_9ENTR
64_003_scaffold_144_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12166..14346
DNA (2181bp) protein (727aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein; K03782 catalase-peroxidase [EC:1.11.1.21]
Catalase-peroxidase n=4 Tax=Citrobacter RepID=J0LVU3_9ENTR
64_003_scaffold_144_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14433..15536)
DNA (1104bp) protein (368aa)
gldA; glycerol dehydrogenase (EC:1.1.1.6); K00005 glycerol dehydrogenase [EC:1.1.1.6]
Glycerol dehydrogenase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UI81_9ENTR
Glycerol dehydrogenase {ECO:0000313|EMBL:ETX67119.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_003_scaffold_144_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15549..16211)
DNA (663bp) protein (221aa)
Fructose-6-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00496}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_00496};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fructose-6-phosphate aldolase; K08314 fructose-6-phosphate aldolase 2 [EC:4.1.2.-]
Fructose-6-phosphate aldolase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3B947_CITFR
64_003_scaffold_144_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16459..17307)
DNA (849bp) protein (283aa)
AraC family transcriptional regulator n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3C859_CITFR
AraC family transcriptional regulator {ECO:0000313|EMBL:ETX67121.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_003_scaffold_144_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17459..19192)
DNA (1734bp) protein (578aa)
Phosphoethanolamine transferase CptA {ECO:0000313|EMBL:KEL77807.1}; EC=2.7.-.- {ECO:0000313|EMBL:KEL77807.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QV08_CITFR
UPF0141 membrane protein YijP possibly requiredfor phosphoethanolamine modification of lipopolysaccharide
64_003_scaffold_144_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19405..22056)
DNA (2652bp) protein (884aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31]
Phosphoenolpyruvate carboxylase n=3 Tax=Citrobacter RepID=K8QNZ8_CITFR
64_003_scaffold_144_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22326..23477)
DNA (1152bp) protein (384aa)
Acetylornithine deacetylase {ECO:0000256|HAMAP-Rule:MF_01108, ECO:0000256|SAAS:SAAS00063950}; Short=AO {ECO:0000256|HAMAP-Rule:MF_01108};; Short=Acetylornithinase {ECO:0000256|HAMAP-Rule:MF_01108};; EC=3.5.1.16 {ECO:0000256|HAMAP-Rule:MF_01108};; N-acetylornithinase {ECO:0000256|HAMAP-Rule:MF_01108}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
argE; acetylornithine deacetylase (EC:3.5.1.16); K01438 acetylornithine deacetylase [EC:3.5.1.16]
Acetylornithine deacetylase n=7 Tax=Citrobacter RepID=C1MG11_9ENTR
64_003_scaffold_144_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23633..24637
DNA (1005bp) protein (335aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=2 Tax=Citrobacter RepID=J0VNH2_9ENTR
64_003_scaffold_144_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24647..25420
DNA (774bp) protein (258aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase n=7 Tax=Citrobacter RepID=G9S8Y3_CITFR
64_003_scaffold_144_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25529..26902
DNA (1374bp) protein (458aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Argininosuccinate lyase; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase n=5 Tax=Citrobacter RepID=J1FZT6_9ENTR
64_003_scaffold_144_21
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27166..28083
DNA (918bp) protein (306aa)
Hydrogen peroxide-inducible genes activator n=10 Tax=Enterobacteriaceae RepID=G9S8Y1_CITFR
Hydrogen peroxide-inducible genes activator {ECO:0000313|EMBL:CEJ66486.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
oxyR; hydrogen peroxide-inducible regulon activator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
64_003_scaffold_144_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28066..29466)
DNA (1401bp) protein (467aa)
Soluble pyridine nucleotide transhydrogenase {ECO:0000256|HAMAP-Rule:MF_00247}; Short=STH {ECO:0000256|HAMAP-Rule:MF_00247};; EC=1.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00247};; NAD(P)(+) transhydrogenase [B-specific] {ECO:0000256|HAMAP-Rule:MF_00247}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
soluble pyridine nucleotide transhydrogenase (EC:1.6.1.1)
Soluble pyridine nucleotide transhydrogenase n=8 Tax=Citrobacter RepID=C1MG16_9ENTR
64_003_scaffold_144_23
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29658..30293
DNA (636bp) protein (212aa)
HTH-type transcriptional repressor FabR n=10 Tax=Citrobacter RepID=C1MG17_9ENTR
HTH-type transcriptional repressor FabR {ECO:0000256|HAMAP-Rule:MF_01190}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
yijC; TetR family transcriptional regulator
64_003_scaffold_144_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30309..30668
DNA (360bp) protein (120aa)
Inner membrane protein n=5 Tax=Citrobacter RepID=J0M267_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC03990.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Putative inner membrane protein
64_003_scaffold_144_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30751..31851)
DNA (1101bp) protein (367aa)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tRNA(m5U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tmRNA (uracil(341)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
trmA; tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35); K00557 tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
tRNA/tmRNA (uracil-C(5))-methyltransferase n=6 Tax=Citrobacter RepID=J1FZU1_9ENTR
64_003_scaffold_144_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32219..34075
DNA (1857bp) protein (619aa)
Vitamin B12 transporter BtuB n=3 Tax=Citrobacter RepID=J0LVV5_9ENTR
Vitamin B12 transporter BtuB {ECO:0000256|HAMAP-Rule:MF_01531}; Cobalamin receptor {ECO:0000256|HAMAP-Rule:MF_01531}; Outer membrane cobalamin translocator {ECO:0000256|HAMAP-Rule:MF_01531}; Flags: Precursor;; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
btuB; vitamin B12/cobalamin outer membrane transporter; K02014 iron complex outermembrane recepter protein
64_003_scaffold_144_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34020..34871
DNA (852bp) protein (284aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
murI; glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase n=3 Tax=Citrobacter RepID=C1MG21_9ENTR
Displaying 27 items

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