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64_003_scaffold_162

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_162_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(95..280)
DNA (186bp) protein (62aa)
Outer membrane lipoprotein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CEM0_CITFR
Membrane protein {ECO:0000313|EMBL:KJC07298.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
outer membrane lipoprotein; K07285 outer membrane lipoprotein
64_003_scaffold_162_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(525..1379)
DNA (855bp) protein (285aa)
Transcriptional family n=5 Tax=Citrobacter RepID=J0M033_9ENTR
Fe-S cluster assembly protein HesB {ECO:0000313|EMBL:KJC12882.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
RpiR family transcriptional regulator
64_003_scaffold_162_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1673..3178
DNA (1506bp) protein (502aa)
iolA1; methylmalonate semialdehyde dehydrogenase [acylating] 1; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWF2_CITFR
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJC07296.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_162_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3190..5115
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UP77_9ENTR
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:KJC07295.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
64_003_scaffold_162_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5459..6445
DNA (987bp) protein (329aa)
oxidoreductase domain-containing protein; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
Inositol 2-dehydrogenase n=4 Tax=Citrobacter RepID=J0M6M9_9ENTR
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:KEL78449.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
64_003_scaffold_162_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6484..7413
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1MAD7_9ENTR
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC07293.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
rbsB; ribose transport system substrate-binding protein; K10439 ribose transport system substrate-binding protein
64_003_scaffold_162_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7467..9014
DNA (1548bp) protein (516aa)
Ribose abc transporter n=4 Tax=Citrobacter RepID=J0M037_9ENTR
ABC transporter family protein {ECO:0000313|EMBL:KEL78447.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
ribose transport system ATP-binding protein
64_003_scaffold_162_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9026..10054
DNA (1029bp) protein (343aa)
Sugar transport system permease n=5 Tax=Citrobacter RepID=J1G496_9ENTR
Sugar ABC transporter permease {ECO:0000313|EMBL:KJC13024.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
inner-membrane translocator; K10440 ribose transport system permease protein
64_003_scaffold_162_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10063..11196
DNA (1134bp) protein (378aa)
Oxidoreductase domain-containing protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CY47_CITFR
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:KJC13023.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
oxidoreductase domain-containing protein
64_003_scaffold_162_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11209..13113
DNA (1905bp) protein (635aa)
Ribokinase pfkb n=2 Tax=Citrobacter RepID=J0M6N2_9ENTR
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:KJC07289.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
5-dehydro-2-deoxygluconokinase
64_003_scaffold_162_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13128..14018
DNA (891bp) protein (297aa)
xylose isomerase domain-containing protein; K03335 inosose dehydratase [EC:4.2.1.44]
Xylose isomerase domain-containing protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CEL1_CITFR
MocC {ECO:0000313|EMBL:KJC13021.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_162_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14028..14846
DNA (819bp) protein (273aa)
5-deoxy-glucuronate isomerase; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-]
5-deoxy-glucuronate isomerase n=3 Tax=Citrobacter RepID=J0M041_9ENTR
KduI/IolB family protein {ECO:0000313|EMBL:KEL78442.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
64_003_scaffold_162_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14953..15465)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8VBQ5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13474.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
64_003_scaffold_162_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15455..16225)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8V802_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13473.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
yqeI; transcriptional Regulator CadC
64_003_scaffold_162_15
unknown

Not on your lists

comp(16640..16774)
DNA (135bp) protein (45aa)

This feature has no annotations

64_003_scaffold_162_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17207..24130
DNA (6924bp) protein (2308aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V6F6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13472.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein; K07279 hypothetical protein
64_003_scaffold_162_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24248..25681
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V761_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13471.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
64_003_scaffold_162_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25740..26096)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V765_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13470.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein
64_003_scaffold_162_19
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26780..27400
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 RepID=V1NMT2_SALRU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJP52568.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
64_003_scaffold_162_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27298..27588)
DNA (291bp) protein (97aa)
Integrase CP4-57 prophage n=83 Tax=Escherichia coli RepID=B7LDK9_ECO55
integrase
Putative CP4-57-type integrase {ECO:0000313|EMBL:CDL41634.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Displaying 20 items

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