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64_003_scaffold_53_13

Organism: 64_003_Citrobacter_freundii-related_52_820

near complete RP 51 / 55 MC: 5 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 11732..12451

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=8 Tax=Citrobacter RepID=C1M5V5_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 467
  • Evalue 1.10e-128
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 467
  • Evalue 1.60e-128
fliA; flagellar-specific Sigma F (Sigma 28) factor; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 239.0
  • Bit_score: 458
  • Evalue 1.30e-126

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGAATTCACTGTATACCGCTGAAGGTGTAATGGATAAACACTCGCTGTGGCAGCGTTATGTACCGTTGGTGCGTCACGAAGCATTGCGCCTTCAGGTGCGTTTGCCGGCGAGCGTAGAACTGGATGACCTGCTACAAGCGGGCGGCATCGGGTTATTGAATGCCGTTGACCGATATGACGCTTTGCAAGGAACGGCATTTACCACTTACGCAGTGCAGCGTATTCGTGGAGCAATGCTGGACGAACTACGTAGCCGGGATTGGGTGCCGCGTAGCGTTCGGCGCAATGCTCGCGAAGTGGCACAGGCGATGGGACAACTGGAGCAGGAATTAGGGCGCAACGCGACGGAAACCGAAGTGGCGGCGCGTCTGGCTATTCCTGTGCAAGAGTATCGTCAGATGTTGCTCGATACCAATAACAGCCAACTCTTCTCCTACGACGAGTGGCGGGAAGAGCATGGCGATAGTATTGAGCTGGTGACGGAAGAACATCAGCAGGAAAACCCGTTACAACAGCTTCTTGAGGGTAACCTCCGCCAGCGCGTGATGGACGCGATCGAGGCGTTGCCGGAGCGCGAAAAGCTGGTGTTAACGCTGTACTACCAGGAAGAGCTGAATCTGAAAGAGATCGGCGCGGTACTGGAAGTCGGGGAATCACGGGTCAGCCAGTTGCACAGTCAGGCCATCAAACGTCTACGCACCAAGCTGGGTAAGCTATAG
PROTEIN sequence
Length: 240
VNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVDRYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAMGQLEQELGRNATETEVAARLAIPVQEYRQMLLDTNNSQLFSYDEWREEHGDSIELVTEEHQQENPLQQLLEGNLRQRVMDAIEALPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL*