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64_003_scaffold_53

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Displaying items 1-30 of 82 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_53_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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153..434
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:AJB52033.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
64_003_scaffold_53_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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427..675
DNA (249bp) protein (83aa)
Caudovirales tail fibre assembly protein n=2 Tax=Escherichia coli RepID=F4T1G5_ECOLX
Phage tail fiber assembly protein {ECO:0000313|EMBL:ESK19181.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
tail assembly chaperone gp38
64_003_scaffold_53_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1102..2544)
DNA (1443bp) protein (481aa)
Uncharacterized 55.3 kDa protein in gtrB 5'region n=11 Tax=Erwinia amylovora RepID=D4I2B9_ERWAC
Uncharacterized protein {ECO:0000313|EMBL:KJC10372.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_53_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2534..3469)
DNA (936bp) protein (312aa)
Bactoprenol glucosyl transferase n=12 Tax=Erwinia amylovora RepID=D4I2B8_ERWAC
Bactoprenol glucosyl transferase {ECO:0000313|EMBL:ETX69304.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
gtrB; phage-encoded bactoprenol glucosyl transferase
64_003_scaffold_53_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4004..4237)
DNA (234bp) protein (78aa)
UPF0033 protein YedF n=1782 Tax=Enterobacteriaceae RepID=YEDF_ECO57
yedF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG34916.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
64_003_scaffold_53_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4234..5439)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QXQ6_CITFR
Inner membrane protein {ECO:0000313|EMBL:ETX69302.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
inner membrane protein; K07112
64_003_scaffold_53_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5625..6038
DNA (414bp) protein (138aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=J1FVK7_9ENTR
Lipoprotein {ECO:0000313|EMBL:KJC08803.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_53_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6079..7566)
DNA (1488bp) protein (496aa)
Cytoplasmic alpha-amylase {ECO:0000313|EMBL:KJC10366.1}; EC=3.2.1.1 {ECO:0000313|EMBL:KJC10366.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
alpha amylase; K01176 alpha-amylase [EC:3.2.1.1]
Cytoplasmic alpha-amylase n=2 Tax=Citrobacter freundii RepID=G9SL09_CITFR
64_003_scaffold_53_9
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7635..8006)
DNA (372bp) protein (124aa)
Flagellar protein FliT n=9 Tax=Citrobacter RepID=D4B855_9ENTR
Flagellar protein FliT {ECO:0000256|HAMAP-Rule:MF_01180, ECO:0000256|SAAS:SAAS00068921}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
flagellar biosynthesis protein FliT
64_003_scaffold_53_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8006..8413)
DNA (408bp) protein (136aa)
Flagellar protein fliS n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SL07_CITFR
Flagellar protein FliS {ECO:0000313|EMBL:KJC10364.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Flagellar biosynthesis protein FliS
64_003_scaffold_53_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8429..9832)
DNA (1404bp) protein (468aa)
Flagellar hook-associated protein 2 n=1 Tax=Citrobacter sp. KTE32 RepID=R8VAV1_9ENTR
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:ETX69297.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
fliD; flagellar capping protein; K02407 flagellar hook-associated protein 2
64_003_scaffold_53_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10088..11569
DNA (1482bp) protein (494aa)
Flagellin n=1 Tax=Shigella flexneri 1235-66 RepID=I6H2T2_SHIFL
Flagellar biosynthesis protein FliC {ECO:0000313|EMBL:CDL38886.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
flagellin; K02406 flagellin
64_003_scaffold_53_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11732..12451
DNA (720bp) protein (240aa)
RNA polymerase sigma factor FliA n=8 Tax=Citrobacter RepID=C1M5V5_9ENTR
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
fliA; flagellar-specific Sigma F (Sigma 28) factor; K02405 RNA polymerase sigma factor for flagellar operon FliA
64_003_scaffold_53_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12509..13060
DNA (552bp) protein (184aa)
Flagellar regulatory protein FliZ n=1 Tax=Citrobacter sp. KTE30 RepID=R8UW73_9ENTR
Flagellar regulatory protein FliZ {ECO:0000313|EMBL:ETX69294.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flagella biosynthesis protein FliZ; K02425 FliZ protein
64_003_scaffold_53_15
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13161..13961
DNA (801bp) protein (267aa)
Bacterial extracellular solute-binding s, 3 family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H2S9_SHIFL
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:EIQ75071.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
cystine transporter subunit; K02424 cystine transport system substrate-binding protein
64_003_scaffold_53_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14070..15056
DNA (987bp) protein (329aa)
D-cysteine desulfhydrase {ECO:0000256|HAMAP-Rule:MF_01045}; EC=4.4.1.15 {ECO:0000256|HAMAP-Rule:MF_01045};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
D-cysteine desulfhydrase; K05396 D-cysteine desulfhydrase [EC:4.4.1.15]
D-cysteine desulfhydrase n=5 Tax=Citrobacter RepID=J0LRM3_9ENTR
64_003_scaffold_53_17
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15078..15746
DNA (669bp) protein (223aa)
Inner membrane amino-acid ABC transporter permease yecS n=10 Tax=Citrobacter RepID=C1M5V1_9ENTR
Inner membrane amino-acid ABC transporter permease yecS {ECO:0000313|EMBL:EOQ48327.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
cystine ABC transporter permease; K10009 cystine transport system permease protein
64_003_scaffold_53_18
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15743..16495
DNA (753bp) protein (251aa)
putative amino-acid ABC transporter ATP-binding protein YecC; K10010 cystine transport system ATP-binding protein [EC:3.6.3.-]
Uncharacterized protein n=9 Tax=Citrobacter RepID=C1M5V0_9ENTR
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOQ48326.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
64_003_scaffold_53_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16726..17448
DNA (723bp) protein (241aa)
DNA-binding transcriptional activator SdiA n=7 Tax=Citrobacter RepID=J0LXW8_9ENTR
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJC10355.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA-binding transcriptional activator SdiA; K07782 LuxR family transcriptional regulator
64_003_scaffold_53_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17515..17739)
DNA (225bp) protein (75aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M5U8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL81330.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_003_scaffold_53_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18199..18855
DNA (657bp) protein (219aa)
Response regulator uvrY n=6 Tax=Citrobacter RepID=J0LRM8_9ENTR
Response regulator uvrY {ECO:0000313|EMBL:ETX69287.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
uvrY; response regulator; K07689 two-component system, NarL family, invasion response regulator UvrY
64_003_scaffold_53_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18852..20684
DNA (1833bp) protein (611aa)
UvrABC system protein C n=6 Tax=Citrobacter RepID=J1FVM0_9ENTR
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
64_003_scaffold_53_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20740..21288
DNA (549bp) protein (183aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000256|HAMAP-Rule:MF_01437}; EC=2.7.8.5 {ECO:0000256|HAMAP-Rule:MF_01437};; Phosphatidylglycerophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01437}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
phosphatidylglycerophosphate synthetase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=7 Tax=Enterobacteriaceae RepID=C1M5U5_9ENTR
64_003_scaffold_53_trna_1
unknown

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21440..21512
DNA (73bp)
transferRNA Gly
64_003_scaffold_53_trna_2
unknown

Not on your lists

21567..21637
DNA (71bp)
transferRNA Cys
64_003_scaffold_53_trna_3
unknown

Not on your lists

21653..21736
DNA (84bp)
transferRNA Leu
64_003_scaffold_53_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21849..22193)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=J0M0Q0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC08786.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_003_scaffold_53_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22398..23087
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J0VM31_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC08785.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_53_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23101..23571
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QT55_CITFR
Polyketide cyclase {ECO:0000313|EMBL:KJC10342.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_003_scaffold_53_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23591..24616)
DNA (1026bp) protein (342aa)
Patatin n=2 Tax=Citrobacter RepID=K8QXS5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX69281.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
patatin
Displaying items 1-30 of 82 in total

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