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64_003_scaffold_115

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_115_1
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(71..1390)
DNA (1320bp) protein (440aa)
Putrescine/proton symporter, putrescine/ornithine antiporter PotE n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T110_9FIRM
Putrescine-ornithine antiporter {ECO:0000313|EMBL:ETI99163.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
potE; putrescine transporter; K03756 putrescine:ornithine antiporter
64_003_scaffold_115_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1453..3627)
DNA (2175bp) protein (725aa)
ornithine decarboxylase (EC:4.1.1.17); K01581 ornithine decarboxylase [EC:4.1.1.17]
Ornithine decarboxylase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UB73_9FIRM
Orn/Lys/Arg decarboxylase, major protein {ECO:0000313|EMBL:ETI99162.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
64_003_scaffold_115_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4184..5698)
DNA (1515bp) protein (505aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UJ11_9FIRM
64_003_scaffold_115_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5728..6201)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=6 Tax=Veillonella RepID=D1BLD5_VEIPT
transcription elongation factor GreA; K03624 transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
64_003_scaffold_115_5
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6325..7311)
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
tRNA-dihydrouridine synthase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KS24_9FIRM
hypothetical protein
64_003_scaffold_115_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7406..8173)
DNA (768bp) protein (256aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Baf family transcriptional regulator; K03525 type III pantothenate kinase [EC:2.7.1.33]
Type III pantothenate kinase n=5 Tax=Veillonella RepID=T0T106_9FIRM
64_003_scaffold_115_7
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8183..9157)
DNA (975bp) protein (325aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KS26_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
64_003_scaffold_115_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9329..10672
DNA (1344bp) protein (448aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1YQK9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EGL76651.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
64_003_scaffold_115_9
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10726..12654)
DNA (1929bp) protein (643aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=3 Tax=Veillonella RepID=D1YQK8_9FIRM
64_003_scaffold_115_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12743..13288)
DNA (546bp) protein (182aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EFB85604.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EFB85604.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQK7_9FIRM
64_003_scaffold_115_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13312..14310)
DNA (999bp) protein (333aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
tRNA(Ile)-lysidine synthase n=2 Tax=Veillonella parvula RepID=D1YQK6_9FIRM
64_003_scaffold_115_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14279..15175)
DNA (897bp) protein (299aa)
Ppx/GppA phosphatase family protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2B7_9FIRM
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EGL76695.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ppx/GppA phosphatase
64_003_scaffold_115_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15273..15674)
DNA (402bp) protein (134aa)
RNA binding protein (S1 domain) n=5 Tax=Veillonella RepID=T0UJ07_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EGL76676.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
RNA binding S1 domain-containing protein; K07571 S1 RNA binding domain protein
64_003_scaffold_115_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15744..16061)
DNA (318bp) protein (106aa)
Uncharacterized protein n=5 Tax=Veillonella RepID=T0T877_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC67107.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
septum formation initiator
64_003_scaffold_115_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16254..17201)
DNA (948bp) protein (316aa)
lactate/malate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27]
Putative L-lactate dehydrogenase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQK2_9FIRM
Putative L-lactate dehydrogenase {ECO:0000313|EMBL:EFB85599.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
64_003_scaffold_115_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17296..18111)
DNA (816bp) protein (272aa)
UPI0003D5FC3D related cluster n=1 Tax=unknown RepID=UPI0003D5FC3D
Uncharacterized protein {ECO:0000313|EMBL:ETI99147.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
64_003_scaffold_115_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18213..18683)
DNA (471bp) protein (157aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2C2_9FIRM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EGL76741.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
64_003_scaffold_115_18
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18683..19045)
DNA (363bp) protein (121aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25]
Dihydroneopterin aldolase n=2 Tax=Veillonella RepID=D6KM08_9FIRM
Dihydroneopterin aldolase {ECO:0000313|EMBL:EFG22383.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
64_003_scaffold_115_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19045..19878)
DNA (834bp) protein (278aa)
dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Dihydropteroate synthase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLC0_VEIPT
64_003_scaffold_115_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19871..20440)
DNA (570bp) protein (190aa)
GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
GTP cyclohydrolase 1 n=2 Tax=Veillonella parvula RepID=D1BLB9_VEIPT
64_003_scaffold_115_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20449..22005)
DNA (1557bp) protein (519aa)
ABC transporter, ATP-binding protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2C6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGL76730.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ABC transporter
64_003_scaffold_115_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22096..23256)
DNA (1161bp) protein (387aa)
Amidohydrolase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2C7_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EGL76639.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
amidohydrolase
64_003_scaffold_115_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23407..24345)
DNA (939bp) protein (313aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
Peptidase U61 LD-carboxypeptidase A n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLB6_VEIPT
Peptidase U61 LD-carboxypeptidase A {ECO:0000313|EMBL:ACZ24173.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
64_003_scaffold_115_24
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24467..26068)
DNA (1602bp) protein (534aa)
UPI0003D60113 related cluster n=1 Tax=unknown RepID=UPI0003D60113
Bacterial extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ETI99139.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
family 5 extracellular solute-binding protein; K15580 oligopeptide transport system substrate-binding protein
64_003_scaffold_115_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26065..26883)
DNA (819bp) protein (273aa)
beta-lactamase class A-like protein; K01467 beta-lactamase [EC:3.5.2.6]
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB85589.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
64_003_scaffold_115_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26896..27843)
DNA (948bp) protein (316aa)
Oligopeptide transport ATP-binding protein OppF n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T158_9FIRM
Oligopeptide ABC transporter, ATP-binding protein AppF {ECO:0000313|EMBL:EFB85588.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
peptide ABC transporter ATPase; K10823 oligopeptide transport system ATP-binding protein
64_003_scaffold_115_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27843..28823)
DNA (981bp) protein (327aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLB2_VEIPT
peptide ABC transporter ATPase; K15583 oligopeptide transport system ATP-binding protein
Oligopeptide ABC transporter, ATP-binding protein OppD {ECO:0000313|EMBL:EGL76697.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
64_003_scaffold_115_28
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28823..29722)
DNA (900bp) protein (300aa)
Oligopeptide transport system permease protein OppC n=3 Tax=Veillonella RepID=T0UJ66_9FIRM
binding-protein-dependent transporters inner membrane component; K15582 oligopeptide transport system permease protein
Oligopeptide ABC transporter, permease protein OppC {ECO:0000313|EMBL:EFG22393.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
64_003_scaffold_115_29
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29715..30647)
DNA (933bp) protein (311aa)
Binding-protein-dependent transport systems inner membrane component n=5 Tax=Veillonella RepID=D1BLB0_VEIPT
binding-protein-dependent transporters inner membrane component; K02033 peptide/nickel transport system permease protein
Oligopeptide ABC transporter, permease protein OppB {ECO:0000313|EMBL:EFG22394.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
64_003_scaffold_115_30
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30783..31616
DNA (834bp) protein (278aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
phosphomethylpyrimidine kinase type-1; K00868 pyridoxine kinase [EC:2.7.1.35]
Pyridoxal kinase n=3 Tax=Veillonella RepID=T0T834_9FIRM
Displaying items 1-30 of 39 in total

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