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64_003_scaffold_12

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Displaying items 1-30 of 117 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_12_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(904..2586)
DNA (1683bp) protein (561aa)
hypothetical protein; K12574 ribonuclease J [EC:3.1.-.-]
Ribonuclease J 1 {ECO:0000255|HAMAP-Rule:MF_01491}; Short=RNase J1 {ECO:0000255|HAMAP-Rule:MF_01491};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01491};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Ribonuclease J 1 n=78 Tax=Staphylococcus RepID=RNJ1_STAEQ
64_003_scaffold_12_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2586..2804)
DNA (219bp) protein (73aa)
UPF0356 protein SERP0677 n=79 Tax=Staphylococcus epidermidis RepID=Y677_STAEQ
hypothetical protein
UPF0356 protein M464_0209775 {ECO:0000256|HAMAP-Rule:MF_01553}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_003_scaffold_12_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3237..3788)
DNA (552bp) protein (184aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=24 Tax=Staphylococcus epidermidis RepID=E6JLA6_STAEP
64_003_scaffold_12_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3971..4597
DNA (627bp) protein (209aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=C5QW80_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36465.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
64_003_scaffold_12_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4768..5880
DNA (1113bp) protein (371aa)
pyrubate dehydrogenase E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component subunit alpha; EC=1.2.4.1;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Pyruvate dehydrogenase E1 component subunit alpha n=63 Tax=Staphylococcus epidermidis RepID=ODPA_STAEQ
64_003_scaffold_12_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5884..6861
DNA (978bp) protein (326aa)
Transketolase, C-terminal domain protein {ECO:0000313|EMBL:EES36418.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EES36418.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
pyruvate dehydrogenase E1 component subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase, C-terminal domain protein n=7 Tax=Staphylococcus epidermidis RepID=C5QW82_STAEP
64_003_scaffold_12_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6992..8293
DNA (1302bp) protein (434aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EES36419.1}; EC=2.3.1.12 {ECO:0000313|EMBL:EES36419.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
pdhC; branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=5 Tax=Staphylococcus epidermidis RepID=J0FGU8_STAEP
64_003_scaffold_12_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8298..9704
DNA (1407bp) protein (469aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Dihydrolipoyl dehydrogenase n=3 Tax=Staphylococcus epidermidis RepID=H3WH45_STAEP
64_003_scaffold_12_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10016..10294
DNA (279bp) protein (93aa)
UPF0223 protein HMPREF0791_0928 n=9 Tax=Staphylococcus epidermidis RepID=C5QW85_STAEP
UPF0223 protein HMPREF0791_0928 {ECO:0000256|HAMAP-Rule:MF_01041}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
64_003_scaffold_12_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10433..10972
DNA (540bp) protein (180aa)
DNA-binding helix-turn-helix protein n=26 Tax=Staphylococcus epidermidis RepID=C5QW86_STAEP
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EES36422.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Cro/CI family transcriptional regulator
64_003_scaffold_12_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10984..12078
DNA (1095bp) protein (365aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
ABC transporter, ATP-binding protein n=22 Tax=Staphylococcus epidermidis RepID=C5QW87_STAEP
64_003_scaffold_12_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12071..12874
DNA (804bp) protein (268aa)
Spermidine/putrescine ABC transporter, permease protein PotB n=2 Tax=Staphylococcus epidermidis RepID=J0FGU3_STAEP
ABC transporter, permease protein {ECO:0000313|EMBL:EES36424.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
potB protein; K11071 spermidine/putrescine transport system permease protein
64_003_scaffold_12_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12880..13692
DNA (813bp) protein (271aa)
Binding--dependent transport system inner membrane component family protein n=6 Tax=Staphylococcus epidermidis RepID=E6JL97_STAEP
potC; spermidine/putrescine ABC transporter permease PotC; K11070 spermidine/putrescine transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:EES36425.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_003_scaffold_12_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13689..14762
DNA (1074bp) protein (358aa)
Bacterial extracellular solute-binding family protein n=6 Tax=Staphylococcus epidermidis RepID=E6JL96_STAEP
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESV20144.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein
64_003_scaffold_12_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14831..15982
DNA (1152bp) protein (384aa)
Uncharacterized protein n=20 Tax=Staphylococcus epidermidis RepID=C5QW91_STAEP
Chitinase {ECO:0000313|EMBL:ESV20145.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
64_003_scaffold_12_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16288..16824
DNA (537bp) protein (179aa)
Tetraspanin domain protein n=6 Tax=Staphylococcus epidermidis RepID=H3WH37_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36428.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
64_003_scaffold_12_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17108..18469)
DNA (1362bp) protein (454aa)
Divalent metal cation transporter MntH n=13 Tax=Staphylococcus epidermidis RepID=V4Q2R8_STAEP
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
manganese transport protein MntH; K03322 manganese transport protein
64_003_scaffold_12_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18584..19195)
DNA (612bp) protein (204aa)
UPF0637 protein HMPREF0791_0937 n=24 Tax=Staphylococcus epidermidis RepID=C5QW94_STAEP
UPF0637 protein M464_0209855 {ECO:0000256|HAMAP-Rule:MF_01851}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
64_003_scaffold_12_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19372..20193
DNA (822bp) protein (274aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase family protein n=20 Tax=Staphylococcus epidermidis RepID=E6JL91_STAEP
Inositol monophosphatase {ECO:0000313|EMBL:ESV20149.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_003_scaffold_12_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20768..20959)
DNA (192bp) protein (64aa)
Uncharacterized protein n=10 Tax=Staphylococcus epidermidis RepID=C5QW96_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES36432.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_003_scaffold_12_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21058..22905
DNA (1848bp) protein (616aa)
GTP-binding protein TypA n=10 Tax=Staphylococcus epidermidis RepID=C5QW97_STAEP
GTP-binding protein TypA {ECO:0000313|EMBL:EES36433.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
GTP-binding protein TypA; K06207 GTP-binding protein
64_003_scaffold_12_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23008..23163)
DNA (156bp) protein (52aa)
Uncharacterized protein n=26 Tax=Staphylococcus epidermidis RepID=C5QW98_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36434.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
64_003_scaffold_12_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23165..23647)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0FR18_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV20153.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
64_003_scaffold_12_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23792..24067
DNA (276bp) protein (92aa)
UPF0358 protein SERP0701 n=82 Tax=Staphylococcus epidermidis RepID=Y701_STAEQ
hypothetical protein
UPF0358 protein SE_0811 {ECO:0000255|HAMAP-Rule:MF_01560}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
64_003_scaffold_12_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24471..25694
DNA (1224bp) protein (408aa)
Cell division protein, FtsW/RodA/SpoVE family n=2 Tax=Staphylococcus epidermidis RepID=J0F6A1_STAEP
Cell division protein FtsW {ECO:0000313|EMBL:ESV20155.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
cell cycle protein FtsW; K03588 cell division protein FtsW
64_003_scaffold_12_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26085..29546
DNA (3462bp) protein (1154aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
pyruvate carboxylase (EC:6.4.1.1); K01958 pyruvate carboxylase [EC:6.4.1.1]
Pyruvate carboxylase n=11 Tax=Staphylococcus epidermidis RepID=V4SDH2_STAEP
64_003_scaffold_12_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29688..30614)
DNA (927bp) protein (309aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01664, ECO:0000256|SAAS:SAAS00010542}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01664};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01664, ECO:0000256|SAAS:SAAS00010558};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Rule:MF_01664}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Heme A synthase n=2 Tax=Staphylococcus epidermidis W23144 RepID=C5QWA4_STAEP
heme synthase; K02259 cytochrome c oxidase assembly protein subunit 15
64_003_scaffold_12_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30900..31811
DNA (912bp) protein (304aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
ctaB; protoheme IX farnesyltransferase (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=22 Tax=Staphylococcus epidermidis RepID=C5QWA5_STAEP
64_003_scaffold_12_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31837..32298
DNA (462bp) protein (154aa)
Uncharacterized protein n=25 Tax=Staphylococcus epidermidis RepID=C5QWA6_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36442.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K08976 putative membrane protein
64_003_scaffold_12_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32738..33790
DNA (1053bp) protein (351aa)
Cysteine-rich secretory family protein n=1 Tax=Staphylococcus epidermidis VCU128 RepID=H3WH23_STAEP
SCP-like protein {ECO:0000313|EMBL:EES36443.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
Displaying items 1-30 of 117 in total

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