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64_003_scaffold_35

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Displaying items 1-30 of 77 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_35_1
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
Staphylococcal secretory antigen SsaA n=1 Tax=Staphylococcus epidermidis NIHLM001 RepID=J0HR57_STAEP
secretory antigen precursor SsaA
Secretory antigen ssaA {ECO:0000313|EMBL:ETJ13249.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_003_scaffold_35_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(788..2596)
DNA (1809bp) protein (603aa)
Membrane protein, putative n=38 Tax=Staphylococcus epidermidis RepID=Q5HL50_STAEQ
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AAW53037.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_35_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3087..3794)
DNA (708bp) protein (236aa)
Probable transglycosylase IsaA n=47 Tax=Staphylococcus epidermidis RepID=ISAA_STAEQ
hypothetical protein
Putative transglycosylase isaA {ECO:0000313|EMBL:ETJ13247.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_003_scaffold_35_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4316..4420)
DNA (105bp) protein (35aa)
Uncharacterized protein n=30 Tax=Staphylococcus epidermidis RepID=Q5HL48_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53039.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_35_5
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4450..5874)
DNA (1425bp) protein (475aa)
Polyphosphate kinase 2 n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E230_STAEP
hypothetical protein
Polyphosphate:AMP phosphotransferase {ECO:0000313|EMBL:ETJ13245.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_003_scaffold_35_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5975..7033)
DNA (1059bp) protein (353aa)
PTS system, IIC component family protein n=13 Tax=Staphylococcus epidermidis RepID=J0JWE0_STAEP
Membrane protein {ECO:0000313|EMBL:ESV19643.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
regulatory protein
64_003_scaffold_35_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7334..8713)
DNA (1380bp) protein (460aa)
D-serine/D-alanine/glycine transporter n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E1T1_STAEP
Alanine glycine permease {ECO:0000313|EMBL:ESV19644.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
amino acid permease; K03293 amino acid transporter, AAT family
64_003_scaffold_35_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8920..9777)
DNA (858bp) protein (286aa)
Phosphotransferase enzyme family n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0TQX8_STAEP
Phosphotransferase enzyme family {ECO:0000313|EMBL:EES35201.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
fructosamine kinase
64_003_scaffold_35_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10001..11065
DNA (1065bp) protein (355aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00054567}; EC=1.3.-.- {ECO:0000256|SAAS:SAAS00276934};; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
pyrD; dihydroorotate dehydrogenase 2 (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate oxidase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0K5V1_STAEP
64_003_scaffold_35_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11158..11427
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=J0FUM4_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35219.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
64_003_scaffold_35_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11470..12186)
DNA (717bp) protein (239aa)
Uncharacterized protein n=60 Tax=Staphylococcus epidermidis RepID=Q5HL40_STAEQ
hypothetical protein; K09765 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58927.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_35_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12463..13797)
DNA (1335bp) protein (445aa)
Membrane-associated protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E1T7_STAEP
TcaA protein {ECO:0000313|EMBL:ESV19649.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
64_003_scaffold_35_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13801..14811)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=14 Tax=Staphylococcus epidermidis RepID=J0TQY3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19650.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
64_003_scaffold_35_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15233..15628)
DNA (396bp) protein (132aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
aspartate alpha-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
Aspartate 1-decarboxylase n=12 Tax=Staphylococcus epidermidis RepID=C5QZT5_STAEP
64_003_scaffold_35_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15612..16472)
DNA (861bp) protein (287aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
Pantothenate synthetase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0JW72_STAEP
64_003_scaffold_35_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16465..17256)
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase n=15 Tax=Staphylococcus epidermidis RepID=E6JPK3_STAEP
64_003_scaffold_35_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17359..18228
DNA (870bp) protein (290aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
2-dehydropantoate 2-reductase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0TQR5_STAEP
64_003_scaffold_35_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18628..19332)
DNA (705bp) protein (235aa)
Alpha-acetolactate decarboxylase {ECO:0000313|EMBL:EES35211.1}; EC=4.1.1.5 {ECO:0000313|EMBL:EES35211.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
budA; alpha-acetolactate decarboxylase (EC:4.1.1.5); K01575 acetolactate decarboxylase [EC:4.1.1.5]
Alpha-acetolactate decarboxylase n=29 Tax=Staphylococcus epidermidis RepID=C5QZT1_STAEP
64_003_scaffold_35_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19444..21108)
DNA (1665bp) protein (555aa)
Acetolactate synthase, catabolic {ECO:0000313|EMBL:EFE58935.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFE58935.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
budB; acetolactate synthase (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase, catabolic n=49 Tax=Staphylococcus epidermidis RepID=Q5HL32_STAEQ
64_003_scaffold_35_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21171..22121)
DNA (951bp) protein (317aa)
ldh; L-lactate dehydrogenase (EC:1.1.1.27); K00016 L-lactate dehydrogenase [EC:1.1.1.27]
L-lactate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000255|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000255|HAMAP-Rule:MF_00488};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L-lactate dehydrogenase n=53 Tax=Staphylococcus epidermidis RepID=LDH_STAEQ
64_003_scaffold_35_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22955..23836)
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR family n=73 Tax=Staphylococcus epidermidis RepID=Q5HL30_STAEQ
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:ESV19658.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_003_scaffold_35_22

Not on your lists

24380..25831
DNA (1452bp) protein (484aa)
Amino acid permease n=11 Tax=Staphylococcus epidermidis RepID=H3V356_STAEP
amino acid transporter; K03294 basic amino acid/polyamine antiporter, APA family
APC family amino acid-polyamine-organocation transporter {ECO:0000313|EMBL:ETJ21306.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_35_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25959..27296)
DNA (1338bp) protein (446aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19]
Aminotransferase, class III n=40 Tax=Staphylococcus epidermidis RepID=C5QBP0_STAEP
Aminotransferase, class III {ECO:0000313|EMBL:EFE58939.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_35_24

Not on your lists

27562..27993
DNA (432bp) protein (144aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=C5QBN8_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ21304.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
64_003_scaffold_35_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28097..29026)
DNA (930bp) protein (310aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=Q8CR16_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58942.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_35_26

Not on your lists

29298..29888
DNA (591bp) protein (197aa)
Uncharacterized protein n=43 Tax=Staphylococcus epidermidis RepID=Q8CR15_STAES
hypothetical protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:ETJ21302.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_35_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29883..30071)
DNA (189bp) protein (63aa)
transposase n=1 Tax=Staphylococcus epidermidis RepID=UPI000357CFA7
IS1272, transposase {ECO:0000313|EMBL:EFE58944.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
truncated IS1272 transposase
64_003_scaffold_35_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30681..32042
DNA (1362bp) protein (454aa)
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFE58945.1}; EC=1.11.1.1 {ECO:0000313|EMBL:EFE58945.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
coenzyme A disulfide reductase; K00359 NADH oxidase [EC:1.6.-.-]
NADH peroxidase n=10 Tax=Staphylococcus epidermidis RepID=H3V361_STAEP
64_003_scaffold_35_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32347..33237
DNA (891bp) protein (297aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Fructose-bisphosphate aldolase class 1 {ECO:0000256|HAMAP-Rule:MF_00729}; EC=4.1.2.13 {ECO:0000256|HAMAP-Rule:MF_00729};; Fructose-bisphosphate aldolase class I {ECO:0000256|HAMAP-Rule:MF_00729}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Fructose-bisphosphate aldolase class 1 n=48 Tax=Staphylococcus epidermidis RepID=ALF1_STAES
64_003_scaffold_35_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33370..34293)
DNA (924bp) protein (308aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q8CR13_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58947.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 77 in total

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