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64_003_scaffold_37

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Displaying items 1-30 of 87 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_37_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(279..674)
DNA (396bp) protein (132aa)
spxA; Spx family transcriptional regulator; K00537 arsenate reductase [EC:1.20.4.1]
Regulatory protein Spx n=83 Tax=Staphylococcus RepID=SPX_STAEQ
Regulatory protein Spx {ECO:0000256|HAMAP-Rule:MF_01132}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_37_2
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

965..1954
DNA (990bp) protein (330aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Tryptophan--tRNA ligase n=41 Tax=Staphylococcus epidermidis RepID=SYW_STAES
64_003_scaffold_37_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2012..3655)
DNA (1644bp) protein (548aa)
ABC transporter, substrate-binding protein, family 5 n=12 Tax=Staphylococcus epidermidis RepID=H3UE42_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ13778.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
peptide binding protein OppA; K15580 oligopeptide transport system substrate-binding protein
64_003_scaffold_37_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3682..4620)
DNA (939bp) protein (313aa)
Oligopeptide ABC transporter, ATP-binding protein OppF n=46 Tax=Staphylococcus epidermidis RepID=Q5HQH6_STAEQ
oppF protein; K10823 oligopeptide transport system ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE59218.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_37_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4613..5692)
DNA (1080bp) protein (360aa)
Oligopeptide ABC transporter, ATP-binding protein OppD n=39 Tax=Staphylococcus epidermidis RepID=Q5HQH7_STAEQ
oligopeptide transport ATP-binding protein subunit; K15583 oligopeptide transport system ATP-binding protein
Oligopeptide ABC transporter, ATP-binding protein OppD {ECO:0000313|EMBL:AAW53966.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_37_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5707..6777)
DNA (1071bp) protein (357aa)
Oligopeptide transport system permease protein OppC n=14 Tax=Staphylococcus epidermidis RepID=Q8CPT1_STAES
ABC transporter, permease protein {ECO:0000313|EMBL:EFE59220.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
oligopeptide transport system permease OppC; K15582 oligopeptide transport system permease protein
64_003_scaffold_37_7
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6777..7703)
DNA (927bp) protein (309aa)
Oligopeptide ABC transporter, permease protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HQH9_STAEQ
oppB; oligopeptide ABC transporter permease; K15581 oligopeptide transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:ETJ11997.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_003_scaffold_37_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7945..8316
DNA (372bp) protein (124aa)
Uncharacterized protein n=30 Tax=Staphylococcus epidermidis RepID=D4FK97_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59222.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_37_9
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8387..9631)
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=17 Tax=Staphylococcus epidermidis RepID=D4FK98_STAEP
64_003_scaffold_37_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9643..10584)
DNA (942bp) protein (314aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000255|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000255|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000255|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000255|HAMAP-Rule:MF_01815}; Short=KAS III {ECO:0000255|HAMAP-Rule:MF_01815};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 n=45 Tax=Staphylococcus epidermidis RepID=FABH1_STAES
64_003_scaffold_37_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10866..11060
DNA (195bp) protein (65aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HQI3_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59225.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_37_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11239..13833)
DNA (2595bp) protein (865aa)
ATP-dependent chaperone protein ClpB n=19 Tax=Staphylococcus epidermidis RepID=F3SV32_STAEP
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
clpB protein; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
64_003_scaffold_37_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14057..15880)
DNA (1824bp) protein (608aa)
Membrane protein, putative n=31 Tax=Staphylococcus epidermidis RepID=Q5HQI6_STAEQ
Membrane protein, putative {ECO:0000313|EMBL:AAW53950.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
hypothetical protein
64_003_scaffold_37_14
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16275..16583)
DNA (309bp) protein (103aa)
Uncharacterized protein n=80 Tax=Staphylococcus epidermidis RepID=Q5HQI7_STAEQ
hypothetical protein
Metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:ETJ12297.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_003_scaffold_37_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16696..17517
DNA (822bp) protein (274aa)
Cof-like hydrolase n=13 Tax=Staphylococcus epidermidis RepID=D4FNX1_STAEP
Cof-like hydrolase {ECO:0000313|EMBL:EFE58014.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
HAD superfamily hydrolase; K07024
64_003_scaffold_37_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17595..18911
DNA (1317bp) protein (439aa)
Coenzyme A disulfide reductase {ECO:0000256|HAMAP-Rule:MF_01608}; Short=CoA-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_01608};; Short=CoADR {ECO:0000256|HAMAP-Rule:MF_01608};; EC=1.8.1.14 {ECO:0000256|HAMAP-Rule:MF_01608};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
coenzyme A disulfide reductase; K08255 CoA-disulfide reductase [EC:1.8.1.14]
Coenzyme A disulfide reductase n=10 Tax=Staphylococcus epidermidis RepID=D4FNX0_STAEP
64_003_scaffold_37_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19107..19508)
DNA (402bp) protein (134aa)
UPF0344 protein HMPREF0794_2257 n=13 Tax=Staphylococcus epidermidis RepID=D4FNW9_STAEP
UPF0344 protein HMPREF0794_2257 {ECO:0000256|HAMAP-Rule:MF_01536}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
64_003_scaffold_37_18

Not on your lists

comp(19864..20769)
DNA (906bp) protein (302aa)
Uncharacterized protein SERP0556 n=50 Tax=Staphylococcus epidermidis RepID=Y556_STAEQ
fumarylacetoacetate hydrolase
Uncharacterized protein {ECO:0000313|EMBL:ETJ21256.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_37_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20968..24642)
DNA (3675bp) protein (1225aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
ATP-dependent helicase/nuclease subunit A n=9 Tax=Staphylococcus epidermidis RepID=D4FNW7_STAEP
ATP-dependent nuclease subunit A
64_003_scaffold_37_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24611..28090)
DNA (3480bp) protein (1160aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044578};; ATP-dependent helicase/nuclease AddB {ECO:0000256|HAMAP-Rule:MF_01452}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
ATP-dependent helicase/deoxyribonuclease subunit B n=11 Tax=Staphylococcus epidermidis RepID=D4FNW6_STAEP
rexB; exonuclease RexB
64_003_scaffold_37_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28210..28785)
DNA (576bp) protein (192aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
spsB; signal peptidase IB (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I n=18 Tax=Staphylococcus epidermidis RepID=D4FNW5_STAEP
64_003_scaffold_37_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28804..29325)
DNA (522bp) protein (174aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
spsA; signal peptidase IA, inactive; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E651_STAEP
64_003_scaffold_37_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29329..29904)
DNA (576bp) protein (192aa)
SNARE-like domain protein n=14 Tax=Staphylococcus epidermidis RepID=F3TZW1_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53922.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_37_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30236..31567)
DNA (1332bp) protein (444aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Glucose-6-phosphate isomerase n=61 Tax=Staphylococcus epidermidis RepID=G6PI_STAEQ
64_003_scaffold_37_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31913..33118
DNA (1206bp) protein (402aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase n=15 Tax=Staphylococcus epidermidis RepID=D4FNW1_STAEP
64_003_scaffold_37_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33108..34499
DNA (1392bp) protein (464aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
argH; argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase n=25 Tax=Staphylococcus epidermidis RepID=C5Q7P0_STAEP
64_003_scaffold_37_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34650..35699
DNA (1050bp) protein (350aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphodiester phosphodiesterase family protein n=23 Tax=Staphylococcus epidermidis RepID=C5Q7N9_STAEP
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EFE58002.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_37_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35891..37135)
DNA (1245bp) protein (415aa)
gluD; glutamate dehydrogenase, NAD-specific (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2]
Glutamate dehydrogenase n=74 Tax=Staphylococcus epidermidis RepID=Q5HQK3_STAEQ
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_003_scaffold_37_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37244..38434)
DNA (1191bp) protein (397aa)
Ornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01689}; Short=OAT {ECO:0000256|HAMAP-Rule:MF_01689};; EC=2.6.1.13 {ECO:0000256|HAMAP-Rule:MF_01689};; Ornithine--oxo-acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_01689}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
rocD; ornithine--oxo-acid transaminase (EC:2.6.1.13); K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13]
Ornithine aminotransferase n=21 Tax=Staphylococcus epidermidis RepID=C5Q7N7_STAEP
64_003_scaffold_37_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38733..39017)
DNA (285bp) protein (95aa)
Uncharacterized protein n=23 Tax=Staphylococcus epidermidis RepID=C5QCT7_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE57999.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
transposase
Displaying items 1-30 of 87 in total

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