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64_003_scaffold_84

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Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_84_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(527..1330)
DNA (804bp) protein (268aa)
pheA; prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase {ECO:0000313|EMBL:EFE58508.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EFE58508.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Prephenate dehydratase n=68 Tax=Staphylococcus epidermidis RepID=Q5HN20_STAEQ
64_003_scaffold_84_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1349..1927)
DNA (579bp) protein (193aa)
nitric-oxide synthase, oxygenase subunit; K00491 nitric-oxide synthase, bacterial [EC:1.14.13.39]
Nitric oxide synthase oxygenase {ECO:0000256|PIRNR:PIRNR037219}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR037219};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Nitric oxide synthase oxygenase n=2 Tax=Staphylococcus epidermidis RepID=F9LID0_STAEP
64_003_scaffold_84_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1990..2415)
DNA (426bp) protein (142aa)
nitric-oxide synthase, oxygenase subunit; K00491 nitric-oxide synthase, bacterial [EC:1.14.13.39]
Nitric oxide synthase oxygenase {ECO:0000256|PIRNR:PIRNR037219}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR037219};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Nitric oxide synthase oxygenase n=37 Tax=Staphylococcus epidermidis RepID=Q5HN21_STAEQ
64_003_scaffold_84_4

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2607..4076
DNA (1470bp) protein (490aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11); K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase n=47 Tax=Staphylococcus epidermidis RepID=Q8CRT3_STAES
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:ETJ21452.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_84_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4069..4896
DNA (828bp) protein (276aa)
nadE; NAD synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5]
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NH(3)-dependent NAD(+) synthetase n=37 Tax=Staphylococcus epidermidis RepID=NADE_STAEQ
64_003_scaffold_84_6

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4970..5596
DNA (627bp) protein (209aa)
UPF0316 protein SERP1448 n=57 Tax=Staphylococcus epidermidis RepID=Y1448_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21450.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_84_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5580..5759
DNA (180bp) protein (60aa)
Uncharacterized protein n=51 Tax=Staphylococcus epidermidis RepID=Q8CRT5_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58513.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_84_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6171..7466
DNA (1296bp) protein (432aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Adenylosuccinate lyase n=50 Tax=Staphylococcus epidermidis RepID=PUR8_STAEQ
64_003_scaffold_84_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7591..7893
DNA (303bp) protein (101aa)
Uncharacterized protein n=57 Tax=Staphylococcus epidermidis RepID=Q5HN27_STAEQ
hypothetical protein
TrpR family protein YerC/YecD {ECO:0000313|EMBL:EFE58515.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_84_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8217..8909
DNA (693bp) protein (231aa)
geranylgeranylglyceryl phosphate synthase-like protein; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-]
Heptaprenylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=HepGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.n9 {ECO:0000256|HAMAP-Rule:MF_00112};; Glycerol-1-phosphate heptaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_00112}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Heptaprenylglyceryl phosphate synthase n=52 Tax=Staphylococcus epidermidis RepID=PCRB_STAEQ
64_003_scaffold_84_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8906..11095
DNA (2190bp) protein (730aa)
ATP-dependent DNA helicase PcrA; EC=3.6.4.12;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
ATP-depentend DNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
ATP-dependent DNA helicase PcrA n=27 Tax=Staphylococcus epidermidis RepID=PCRA_STAES
64_003_scaffold_84_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11099..13096
DNA (1998bp) protein (666aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=31 Tax=Staphylococcus epidermidis RepID=C5Q6E9_STAEP
64_003_scaffold_84_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13116..14324
DNA (1209bp) protein (403aa)
CamS sex pheromone family protein n=14 Tax=Staphylococcus epidermidis RepID=D4FMC6_STAEP
CamS sex pheromone family protein {ECO:0000313|EMBL:EFE58519.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
camS; hypothetical protein
64_003_scaffold_84_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14651..16186)
DNA (1536bp) protein (512aa)
Sodium/proline symporter n=13 Tax=Staphylococcus epidermidis RepID=D4FMC7_STAEP
Sodium/proline symporter {ECO:0000313|EMBL:EFE58520.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
putP; proline permease; K11928 sodium/proline symporter
64_003_scaffold_84_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16564..16866
DNA (303bp) protein (101aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000255|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000255|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00122};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=45 Tax=Staphylococcus epidermidis RepID=GATC_STAEQ
64_003_scaffold_84_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16868..18325
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A n=32 Tax=Staphylococcus epidermidis RepID=C5Q6F3_STAEP
64_003_scaffold_84_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18338..19765
DNA (1428bp) protein (476aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00121};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=51 Tax=Staphylococcus epidermidis RepID=GATB_STAEQ
64_003_scaffold_84_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19990..20940
DNA (951bp) protein (317aa)
Lipid kinase, YegS/Rv2252/BmrU family n=31 Tax=Staphylococcus epidermidis RepID=J0EDZ2_STAEP
Putative lipid kinase {ECO:0000313|EMBL:EFE58524.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
lipid kinase; K07029
64_003_scaffold_84_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20972..22390
DNA (1419bp) protein (473aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFE58525.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFE58525.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
RNA methyltransferase-like protein; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA (Uracil-5-)-methyltransferase RumA n=3 Tax=Staphylococcus epidermidis RepID=D4FMD2_STAEP
64_003_scaffold_84_20

Not on your lists

22534..23076
DNA (543bp) protein (181aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HN38_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21436.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_84_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23386..24456
DNA (1071bp) protein (357aa)
DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV {ECO:0000255|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000255|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_01113};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
DNA polymerase IV n=41 Tax=Staphylococcus epidermidis RepID=DPO4_STAES
64_003_scaffold_84_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24487..25041)
DNA (555bp) protein (185aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Exonuclease n=46 Tax=Staphylococcus epidermidis RepID=Q5HN40_STAEQ
Exonuclease {ECO:0000313|EMBL:EFE58528.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_84_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25230..25730)
DNA (501bp) protein (167aa)
ferritin; K02217 ferritin [EC:1.16.3.1]
Bacterial non-heme ferritin; EC=1.16.3.2;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Ferritin n=70 Tax=Staphylococcus epidermidis RepID=FTN_STAES
64_003_scaffold_84_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25952..27265
DNA (1314bp) protein (438aa)
Mur ligase middle domain protein n=15 Tax=Staphylococcus epidermidis RepID=D4FMD7_STAEP
Mur ligase middle domain protein {ECO:0000313|EMBL:EFE58530.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
UDP-N-acetylmuramyl tripeptide synthetase-like protein
64_003_scaffold_84_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27267..27992
DNA (726bp) protein (242aa)
Cobyric acid synthase, putative n=63 Tax=Staphylococcus epidermidis RepID=Q5HN43_STAEQ
cobyric acid synthase; K07009
Glutamine amidotransferase {ECO:0000313|EMBL:ESV19991.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_003_scaffold_84_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28433..28969
DNA (537bp) protein (179aa)
Immunodominant antigen B, putative n=38 Tax=Staphylococcus epidermidis RepID=Q5HN44_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58532.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_84_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29120..30106)
DNA (987bp) protein (329aa)
UPF0421 protein SERP1427 n=28 Tax=Staphylococcus epidermidis RepID=Y1427_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58533.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_84_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30280..31035
DNA (756bp) protein (252aa)
Methionine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000255|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000255|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000255|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000255|HAMAP-Rule:MF_01974}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=33 Tax=Staphylococcus epidermidis RepID=MAP1_STAES
64_003_scaffold_84_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31193..31579
DNA (387bp) protein (129aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=C5Q6G4_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE58535.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
64_003_scaffold_84_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31594..32295
DNA (702bp) protein (234aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=Q5HN48_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58536.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 55 in total

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