ggKbase home page

64_003_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 42 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_120_1
Staphylococcus simiae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

131..226
DNA (96bp) protein (32aa)
Uncharacterized protein n=6 Tax=Staphylococcus epidermidis RepID=C5Q832_STAEP
Integrase {ECO:0000313|EMBL:EHJ07436.1}; Flags: Fragment;; TaxID=911238 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus simiae CCM 7213.;"
hypothetical protein
64_003_scaffold_120_trna_2
unknown

Not on your lists

comp(384..472)
DNA (89bp)
transferRNA Ser
64_003_scaffold_120_trna_1
unknown

Not on your lists

comp(479..550)
DNA (72bp)
transferRNA Asn
64_003_scaffold_120_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(733..1308)
DNA (576bp) protein (192aa)
ComK family protein n=75 Tax=Staphylococcus epidermidis RepID=Q5HQD5_STAEQ
competence transcription factor; K02250 competence protein ComK
ComK family protein {ECO:0000313|EMBL:AAW54056.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_120_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1523..1741
DNA (219bp) protein (73aa)
Uncharacterized protein n=81 Tax=Staphylococcus epidermidis RepID=Q5HQD6_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54050.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_120_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1819..2805)
DNA (987bp) protein (329aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lipoate-protein ligase A; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Lipoyltransferase and lipoate-protein ligase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E5R9_STAEP
64_003_scaffold_120_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3010..3195
DNA (186bp) protein (62aa)
Uncharacterized protein n=81 Tax=Staphylococcus epidermidis RepID=Q5HQD8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54048.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_120_6

Not on your lists

3201..3803
DNA (603bp) protein (201aa)
Abortive infection family protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HQD9_STAEQ
hypothetical protein; K07052
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ETJ20196.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_120_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3906..5456)
DNA (1551bp) protein (517aa)
5'-nucleotidase, C-terminal domain protein n=19 Tax=Staphylococcus epidermidis RepID=C5QW16_STAEP
5'-nucleotidase, C-terminal domain protein {ECO:0000313|EMBL:EES36515.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
nucleotidase
64_003_scaffold_120_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5549..6907)
DNA (1359bp) protein (453aa)
Cation transport protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0TUZ7_STAEP
ATP synthase {ECO:0000313|EMBL:ESV20074.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
sodium transport family protein
64_003_scaffold_120_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6925..8745)
DNA (1821bp) protein (607aa)
Trypsin n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E5R4_STAEP
Trypsin {ECO:0000313|EMBL:EES36513.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
serine protease
64_003_scaffold_120_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8953..9759)
DNA (807bp) protein (269aa)
Integral membrane protein, YkoY family n=12 Tax=Staphylococcus epidermidis RepID=C5QW13_STAEP
Integral membrane protein, YkoY family {ECO:0000313|EMBL:EES36512.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
TerC family integral membrane protein
64_003_scaffold_120_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10068..11630)
DNA (1563bp) protein (521aa)
Peptide chain release factor 3 n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E608_STAEP
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3
64_003_scaffold_120_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11634..11843)
DNA (210bp) protein (70aa)
Uncharacterized protein n=18 Tax=Staphylococcus epidermidis RepID=J0GDJ0_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV20070.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
64_003_scaffold_120_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11869..13353)
DNA (1485bp) protein (495aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.7 {ECO:0000256|HAMAP-Rule:MF_00208};; L-lysine-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:L-Lys ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staph
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase (EC:6.3.2.13); K05362 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase n=19 Tax=Staphylococcus epidermidis RepID=H3WT94_STAEP
64_003_scaffold_120_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13873..15048
DNA (1176bp) protein (392aa)
diacylglycerol glucosyltransferase; K03429 1,2-diacylglycerol 3-glucosyltransferase [EC:2.4.1.157]
Processive diacylglycerol beta-glucosyltransferase {ECO:0000255|HAMAP-Rule:MF_01280}; EC=2.4.1.315;; Beta-diglucosyldiacylglycerol synthase {ECO:0000255|HAMAP-Rule:MF_01280}; Short=Beta-DGS {ECO:0000255|HAMAP-Rule:MF_01280};; Short=DGlcDAG synthase {ECO:0000255|HAMAP-Rule:MF_01280};; Short=Glc2-DAG synthase {ECO:0000255|HAMAP-Rule:MF_01280};; Beta-gentiobiosyldiacylglycerol synthase {ECO:0000255|HAMAP-Rule:MF_01280}; Beta-monoglucosyldiacylglycerol synthase {ECO:0000255|HAMAP-Rule:MF_01280}; Short=Beta-MGS
Processive diacylglycerol beta-glucosyltransferase n=14 Tax=Staphylococcus epidermidis RepID=UGTP_STAES
64_003_scaffold_120_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15026..16219
DNA (1194bp) protein (398aa)
Putative glycolipid permease LtaA n=10 Tax=Staphylococcus epidermidis RepID=C5QW08_STAEP
Putative glycolipid permease LtaA {ECO:0000313|EMBL:EES36507.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
64_003_scaffold_120_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16483..16992)
DNA (510bp) protein (170aa)
Putative phosphoesterase M464_0209430 {ECO:0000256|HAMAP-Rule:MF_01444}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01444};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
UPF0477 protein SEVCU129_1335 n=4 Tax=Staphylococcus epidermidis RepID=H3WT97_STAEP
hypothetical protein
64_003_scaffold_120_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17146..17901)
DNA (756bp) protein (252aa)
Uncharacterized protein n=4 Tax=Staphylococcus epidermidis RepID=J0GDJ4_STAEP
Putative esterase {ECO:0000313|EMBL:EES36537.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
64_003_scaffold_120_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18093..19211
DNA (1119bp) protein (373aa)
Membrane protein n=28 Tax=Staphylococcus epidermidis RepID=V6QPB3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36536.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
64_003_scaffold_120_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19609..20379)
DNA (771bp) protein (257aa)
fabI; enoyl-ACP reductase (EC:1.3.1.10); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADPH] {ECO:0000256|PIRNR:PIRNR000094}; Short=ENR {ECO:0000256|PIRNR:PIRNR000094};; EC=1.3.1.39 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Enoyl-[acyl-carrier-protein] reductase [NADPH] n=36 Tax=Staphylococcus epidermidis RepID=Q5HQF2_STAEQ
64_003_scaffold_120_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20601..20972)
DNA (372bp) protein (124aa)
Transposase-like domain protein n=7 Tax=Staphylococcus epidermidis RepID=H3VDI6_STAEP
IS200 family transposase
Transposase, IS200 family, truncation {ECO:0000313|EMBL:AAW54017.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_120_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22591..24849)
DNA (2259bp) protein (753aa)
Daunorubicin resistance protein DrrC, putative n=23 Tax=Staphylococcus epidermidis RepID=Q5HQF5_STAEQ
daunorubicin resistance protein DrrC
Putative excinuclease ABC, A subunit {ECO:0000313|EMBL:EFE59230.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_120_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24968..25345)
DNA (378bp) protein (126aa)
Glucose-6-phosphate dehydrogenase, C-terminal-like domain protein n=3 Tax=Staphylococcus epidermidis RepID=H3VDJ1_STAEP
glucose-6-phosphate 1-dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:EFE59231.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_120_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25354..25599)
DNA (246bp) protein (82aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Uncharacterized protein n=32 Tax=Staphylococcus epidermidis RepID=C5Q7T5_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59232.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_120_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25831..25989)
DNA (159bp) protein (53aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|RuleBase:RU000497}; EC=1.1.1.49 {ECO:0000256|RuleBase:RU000497};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=10 Tax=Staphylococcus epidermidis RepID=C5Q7T4_STAEP
64_003_scaffold_120_25

Not on your lists

comp(26022..26327)
DNA (306bp) protein (102aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate dehydrogenase, NAD-binding domain protein n=11 Tax=Staphylococcus epidermidis RepID=F3TUD8_STAEP
Glucose-6-phosphate 1-dehydrogenase {ECO:0000313|EMBL:ETJ19177.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_120_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26428..26631
DNA (204bp) protein (68aa)
Transposase, putative, truncation n=32 Tax=Staphylococcus epidermidis RepID=Q5HQF6_STAEQ
transposase, truncation
Uncharacterized protein {ECO:0000313|EMBL:EFE59234.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_120_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26904..27167)
DNA (264bp) protein (88aa)
Uncharacterized protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HQF7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54007.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_120_28

Not on your lists

comp(27228..27851)
DNA (624bp) protein (208aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=Q5HQF8_STAEQ
hypothetical protein
TIGR01218 family protein {ECO:0000313|EMBL:ETJ19179.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 1-30 of 42 in total

View Taxonomy