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64_003_scaffold_150

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_003_scaffold_150_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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19..168
DNA (150bp) protein (50aa)
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=F3TPS0_STAEP
truncated IS1272 transposase
IS1272, transposase {ECO:0000313|EMBL:EFE60047.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

383..1513
DNA (1131bp) protein (377aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Epoxyqueuosine reductase n=48 Tax=Staphylococcus epidermidis RepID=Q8CRX0_STAES
(Fe-S)-binding protein
64_003_scaffold_150_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1510..1980
DNA (471bp) protein (157aa)
RNA methyltransferase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
RNA methyltransferase n=51 Tax=Staphylococcus epidermidis RepID=V6QAY7_STAEP
64_003_scaffold_150_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2138..2737
DNA (600bp) protein (200aa)
Glucosamine-6-phosphate isomerase family protein n=9 Tax=Staphylococcus epidermidis RepID=H3V258_STAEP
glucosamine-6-phosphate isomerase
Glucosamine-6-phosphate isomerase family protein {ECO:0000313|EMBL:EFE60050.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2758..2940
DNA (183bp) protein (61aa)
Uncharacterized protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HN83_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:EFE60051.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
64_003_scaffold_150_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3096..3500
DNA (405bp) protein (135aa)
Uncharacterized protein n=10 Tax=Staphylococcus epidermidis RepID=H3UR05_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ14709.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_003_scaffold_150_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3685..5070
DNA (1386bp) protein (462aa)
fumC; fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Fumarate hydratase class II n=49 Tax=Staphylococcus epidermidis RepID=FUMC_STAEQ
64_003_scaffold_150_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5431..6255)
DNA (825bp) protein (275aa)
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Ribosomal large subunit pseudouridine synthase, RluD subfamily n=45 Tax=Staphylococcus epidermidis RepID=Q5HN86_STAEQ
Ribosomal large subunit pseudouridine synthase, RluD subfamily {ECO:0000313|EMBL:AAW54714.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_150_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6414..7547
DNA (1134bp) protein (378aa)
Two-component sensor histidine kinase-like protein n=48 Tax=Staphylococcus epidermidis RepID=Q8CRX7_STAES
two-component sensor histidine kinase-like protein
Histidine kinase {ECO:0000313|EMBL:EFE60055.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7540..8163
DNA (624bp) protein (208aa)
DNA-binding response regulator, LuxR family n=77 Tax=Staphylococcus epidermidis RepID=Q5HN88_STAEQ
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:ESV18735.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_003_scaffold_150_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8434..8898
DNA (465bp) protein (155aa)
Transcriptional regulator, Cro/CI family n=79 Tax=Staphylococcus epidermidis RepID=Q5HN89_STAEQ
Cro/CI family transcriptional regulator
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EES35839.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_003_scaffold_150_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9077..10210
DNA (1134bp) protein (378aa)
Uncharacterized protein n=39 Tax=Staphylococcus epidermidis RepID=C5QA45_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE60058.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
64_003_scaffold_150_13

Not on your lists

10283..10627
DNA (345bp) protein (115aa)
UPF0342 protein SERP1381 n=78 Tax=Staphylococcus epidermidis RepID=Y1381_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ20097.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_150_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10898..12094
DNA (1197bp) protein (399aa)
DNA repair exonuclease family protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HN92_STAEQ
DNA repair exonuclease
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFE60060.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12084..15023
DNA (2940bp) protein (980aa)
Uncharacterized protein n=8 Tax=Staphylococcus epidermidis RepID=H3V269_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE60061.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15020..15961
DNA (942bp) protein (314aa)
Cmp-binding-factor 1 n=41 Tax=Staphylococcus epidermidis RepID=Q5HN94_STAEQ
3'-5' exoribonuclease; K03698 CMP-binding protein
HD domain protein {ECO:0000313|EMBL:EFE60062.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16387..17364)
DNA (978bp) protein (326aa)
protein export protein PrsA; K07533 foldase protein PrsA [EC:5.2.1.8]
Foldase protein PrsA {ECO:0000256|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Foldase protein PrsA n=38 Tax=Staphylococcus epidermidis RepID=PRSA_STAEQ
64_003_scaffold_150_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17567..18127)
DNA (561bp) protein (187aa)
Uncharacterized protein n=54 Tax=Staphylococcus epidermidis RepID=Q5HN97_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54760.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_150_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18293..18664)
DNA (372bp) protein (124aa)
Uncharacterized protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HN98_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE60065.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18741..19166)
DNA (426bp) protein (142aa)
HIT family protein n=52 Tax=Staphylococcus epidermidis RepID=Q5HN99_STAEQ
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation
HIT family protein {ECO:0000313|EMBL:AAW54750.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_150_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19296..20036
DNA (741bp) protein (247aa)
ABC transporter ecsA-like protein n=51 Tax=Staphylococcus epidermidis RepID=Q8CNR6_STAES
ABC transporter ecsA-like protein; K01990 ABC-2 type transport system ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE60067.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_22

Not on your lists

20005..21252
DNA (1248bp) protein (416aa)
Bacterial ABC transporter protein EcsB n=16 Tax=Staphylococcus epidermidis RepID=F9LJK3_STAEP
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ20088.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC transporter permease; K01992 ABC-2 type transport system permease protein
64_003_scaffold_150_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21311..21934
DNA (624bp) protein (208aa)
Cadmium resistance transporter family protein n=2 Tax=Staphylococcus epidermidis RepID=F3SZL5_STAEP
cadmium resistance family protein
Cadmium resistance transporter family protein {ECO:0000313|EMBL:EFE60069.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_003_scaffold_150_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22491..22994)
DNA (504bp) protein (168aa)
Antibiotic biosynthesis monooxygenase n=14 Tax=Staphylococcus epidermidis RepID=F3TPP7_STAEP
RNAIII-activating protein TRAP
Signal transduction protein TRAP; Target of RNAIII-activating protein; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_003_scaffold_150_25

Not on your lists

23269..24348
DNA (1080bp) protein (360aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase n=3 Tax=Staphylococcus epidermidis RepID=V6QAM8_STAEP
Uroporphyrinogen decarboxylase {ECO:0000313|EMBL:ETJ20085.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_150_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24425..25348
DNA (924bp) protein (308aa)
hemH; ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ferrochelatase n=44 Tax=Staphylococcus epidermidis RepID=HEMH_STAEQ
64_003_scaffold_150_27

Not on your lists

25441..26889
DNA (1449bp) protein (483aa)
hemG; protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4]
Protoporphyrinogen oxidase n=12 Tax=Staphylococcus epidermidis RepID=Q5HNA6_STAEQ
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ETJ20083.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_150_28

Not on your lists

27025..27579
DNA (555bp) protein (185aa)
Uncharacterized protein n=37 Tax=Staphylococcus epidermidis RepID=Q5HNA7_STAEQ
hypothetical protein; K07002
Putative esterase {ECO:0000313|EMBL:ETJ20082.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_003_scaffold_150_trna_1
unknown

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27894..27967
DNA (74bp)
transferRNA Met
64_003_scaffold_150_trna_2
unknown

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27982..28054
DNA (73bp)
transferRNA Asp
Displaying items 1-30 of 37 in total

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