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64_006_scaffold_20

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_20_1
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..310
DNA (309bp) protein (103aa)
Segregation and condensation protein B n=1 Tax=Staphylococcus epidermidis VCU071 RepID=H0DMN3_STAEP
Segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
64_006_scaffold_20_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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303..1040
DNA (738bp) protein (246aa)
Ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Pseudouridine synthase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E4C4_STAEP
64_006_scaffold_20_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1174..1899
DNA (726bp) protein (242aa)
DNA-binding response regulator SrrA n=51 Tax=Staphylococcus epidermidis RepID=Q5HP58_STAEQ
Staphylococcal respiratory response protein SrrA
Response regulator receiver domain protein {ECO:0000313|EMBL:EFE59685.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_20_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1883..3649
DNA (1767bp) protein (589aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Sensor histidine kinase SrrB n=48 Tax=Staphylococcus epidermidis RepID=Q5HP59_STAEQ
Staphylococcal respiratory response protein SrrB
64_006_scaffold_20_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4241..4780
DNA (540bp) protein (180aa)
Uncharacterized protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HP60_STAEQ
Substrate-specific component RibU of riboflavin ECF transporter
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_006_scaffold_20_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5185..5433)
DNA (249bp) protein (83aa)
Ferredoxin n=2 Tax=Staphylococcus epidermidis RepID=J0ZB54_STAEP
Ferredoxin
Ferredoxin {ECO:0000313|EMBL:EES36210.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_006_scaffold_20_7

Not on your lists

5566..6504
DNA (939bp) protein (313aa)
Uncharacterized protein n=30 Tax=Staphylococcus epidermidis RepID=Q8CSH3_STAES
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ18677.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_20_8

Not on your lists

6491..7870
DNA (1380bp) protein (460aa)
ATP-dependent DNA helicase RecQ n=40 Tax=Staphylococcus epidermidis RepID=Q5HP64_STAEQ
Probable ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ETJ18676.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_20_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7991..9385
DNA (1395bp) protein (465aa)
Elastin-binding protein EbpS n=7 Tax=Staphylococcus epidermidis RepID=H3VCF9_STAEP
Elastin-binding protein EbpS {ECO:0000313|EMBL:EFE59691.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Elastin binding protein EbpS
64_006_scaffold_20_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9518..10504
DNA (987bp) protein (329aa)
Thioredoxin reductase (EC:1.8.1.9)
Pyridine nucleotide-disulfide oxidoreductase family protein n=72 Tax=Staphylococcus epidermidis RepID=Q5HP66_STAEQ
Thioredoxin reductase {ECO:0000313|EMBL:ESV19503.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_006_scaffold_20_11

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comp(10716..11684)
DNA (969bp) protein (323aa)
L-asparaginase (EC:3.5.1.1)
L-asparaginase n=42 Tax=Staphylococcus epidermidis RepID=Q5HP67_STAEQ
Putative asparaginase {ECO:0000313|EMBL:ETJ18673.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_20_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11763..12410
DNA (648bp) protein (216aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Cytidylate kinase n=8 Tax=Staphylococcus epidermidis RepID=F3SYV7_STAEP
64_006_scaffold_20_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


12894..14072
DNA (1179bp) protein (393aa)
30S ribosomal protein S1 n=46 Tax=Staphylococcus epidermidis RepID=RS1_STAEQ rbh
rpsA; 30S ribosomal protein S1
Putative ribosomal protein S1 {ECO:0000313|EMBL:EFE59695.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_20_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14288..15598
DNA (1311bp) protein (437aa)
GTPase Der n=29 Tax=Staphylococcus epidermidis RepID=F3SYV5_STAEP
engA; ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_006_scaffold_20_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15619..16617
DNA (999bp) protein (333aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000255|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000255|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00394}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=46 Tax=Staphylococcus epidermidis RepID=GPDA_STAEQ rbh
64_006_scaffold_20_16
Staphylococcus caprae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16788..17060
DNA (273bp) protein (91aa)
DNA-binding protein HU n=502 Tax=Staphylococcus RepID=DBH_STAAC
histone family protein DNA-binding protein HU
DNA-binding protein HU {ECO:0000313|EMBL:EES40119.1}; TaxID=525378 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus caprae M23864:W1.;"
64_006_scaffold_20_17

Not on your lists

17530..18108
DNA (579bp) protein (193aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HP73_STAEQ
hypothetical protein, similar to component A of hexaprenyl diphosphate synthase
Uncharacterized protein {ECO:0000313|EMBL:ETJ18668.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_20_18

Not on your lists

18101..18826
DNA (726bp) protein (242aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=51 Tax=Staphylococcus epidermidis RepID=UBIE_STAEQ
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:ETJ18667.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_20_19

Not on your lists

18828..19787
DNA (960bp) protein (320aa)
Heptaprenyl diphosphate synthase component II (EC:2.5.1.30)
Polyprenyl synthetase n=44 Tax=Staphylococcus epidermidis RepID=Q5HP75_STAEQ
Heptaprenyl diphosphate syntase component II {ECO:0000313|EMBL:ETJ18666.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_20_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19906..20376
DNA (471bp) protein (157aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Nucleoside diphosphate kinase n=3 Tax=Staphylococcus epidermidis RepID=D4FIM2_STAEP
ndk; nucleoside diphosphate kinase rbh
64_006_scaffold_20_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20785..22023
DNA (1239bp) protein (413aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=49 Tax=Staphylococcus epidermidis RepID=AROC_STAEQ
64_006_scaffold_20_22

Not on your lists

22051..23115
DNA (1065bp) protein (355aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=44 Tax=Staphylococcus epidermidis RepID=AROB_STAEQ rbh
3-dehydroquinate synthase {ECO:0000313|EMBL:ETJ18663.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_20_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23125..24426
DNA (1302bp) protein (434aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=23 Tax=Staphylococcus epidermidis RepID=AROA_STAEQ
64_006_scaffold_20_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24430..25674
DNA (1245bp) protein (415aa)
Uncharacterized protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HP80_STAEQ
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFE59706.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_20_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25688..26251
DNA (564bp) protein (188aa)
UPF0302 protein SERP1032 n=46 Tax=Staphylococcus epidermidis RepID=Y1032_STAEQ rbh
hypothetical protein
UPF0302 protein HMPREF0794_0528 {ECO:0000256|HAMAP-Rule:MF_00760}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_20_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26263..26856
DNA (594bp) protein (198aa)
Uncharacterized protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HP82_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59708.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_20_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26901..27596
DNA (696bp) protein (232aa)
Uncharacterized protein n=56 Tax=Staphylococcus epidermidis RepID=Q5HP83_STAEQ
probable metal-dependent peptidase
Uncharacterized protein {ECO:0000313|EMBL:AAW54414.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_006_scaffold_20_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27777..28094
DNA (318bp) protein (106aa)
Uncharacterized protein n=60 Tax=Staphylococcus epidermidis RepID=Q5HP84_STAEQ
MazG nucleotide pyrophosphohydrolase
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EFE59710.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_20_29

Not on your lists

28116..29258
DNA (1143bp) protein (381aa)
Glycosyl transferase, group 1 family protein n=46 Tax=Staphylococcus epidermidis RepID=Q5HP85_STAEQ
glycosyl transferase, group 1 family protein
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ETJ18656.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_20_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29248..30450
DNA (1203bp) protein (401aa)
tRNA nucleotidyltransferase (EC:2.7.7.72)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01263}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01263};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA CCA-pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA adenylyl-/cytidylyl- transferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA-NT {ECO:0000256|HAMAP-Rule:MF_01263}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
CCA-adding enzyme n=47 Tax=Staphylococcus epidermidis RepID=CCA_STAEQ rbh
Displaying items 1-30 of 47 in total

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