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64_006_scaffold_69

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_69_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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244..360
DNA (117bp) protein (39aa)
Uncharacterized protein n=31 Tax=Staphylococcus epidermidis RepID=Q8CS71_STAES
hypothetical protein
IS1272, transposase {ECO:0000313|EMBL:EES35865.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_006_scaffold_69_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

733..1758
DNA (1026bp) protein (342aa)
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.13)
Glyceraldehyde-3-phosphate dehydrogenase 2; Short=GAPDH 2;; EC=1.2.1.12;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Glyceraldehyde-3-phosphate dehydrogenase 2 n=20 Tax=Staphylococcus epidermidis RepID=G3P2_STAES rbh
64_006_scaffold_69_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2278..2748
DNA (471bp) protein (157aa)
Transcriptional repressor NrdR n=75 Tax=Staphylococcus epidermidis RepID=NRDR_STAEQ rbh
Ribonucleotide reductase transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_006_scaffold_69_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2749..4119
DNA (1371bp) protein (457aa)
Replication initiation and membrane attachment protein n=38 Tax=Staphylococcus epidermidis RepID=Q5HNL9_STAEQ
Helicase loader DnaB
Replication initiation and membrane attachment protein, DnaB/DnaD family {ECO:0000313|EMBL:EFE59859.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4119..5039
DNA (921bp) protein (307aa)
Primosomal protein DnaI n=46 Tax=Staphylococcus epidermidis RepID=Q5HNM0_STAEQ
Helicase loader DnaI
Primosomal protein DnaI {ECO:0000313|EMBL:AAW54612.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_006_scaffold_69_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5392..7329
DNA (1938bp) protein (646aa)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule:MF_00184};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=26 Tax=Staphylococcus epidermidis RepID=SYT_STAES rbh
64_006_scaffold_69_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7758..9260
DNA (1503bp) protein (501aa)
Amino acid permease family protein n=52 Tax=Staphylococcus epidermidis RepID=Q5HNM2_STAEQ
Lysine-specific permease
Amino acid permease {ECO:0000313|EMBL:EFE59862.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_8

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9468..9995
DNA (528bp) protein (176aa)
Translation initiation factor IF-3 n=81 Tax=Staphylococcus epidermidis RepID=IF3_STAEQ rbh
Translation initiation factor 3
Translation initiation factor IF-3 {ECO:0000313|EMBL:ETJ18397.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_69_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10023..10223
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=86 Tax=Staphylococcus RepID=RL35_STAEQ
LSU ribosomal protein L35p
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10275..10631
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=81 Tax=Staphylococcus epidermidis RepID=RL20_STAEQ
LSU ribosomal protein L20p
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11049..11660
DNA (612bp) protein (204aa)
MutT/nudix family protein n=50 Tax=Staphylococcus epidermidis RepID=Q5HNM6_STAEQ
hypothetical protein
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFE59866.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11677..12600
DNA (924bp) protein (308aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HNM7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59867.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12761..14062
DNA (1302bp) protein (434aa)
Cell division trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Trigger factor n=49 Tax=Staphylococcus epidermidis RepID=TIG_STAEQ rbh
64_006_scaffold_69_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14349..15611
DNA (1263bp) protein (421aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=54 Tax=Staphylococcus epidermidis RepID=CLPX_STAEQ rbh
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
64_006_scaffold_69_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15723..16310
DNA (588bp) protein (196aa)
Probable GTP-binding protein EngB n=48 Tax=Staphylococcus epidermidis RepID=ENGB_STAEQ rbh
GTP-binding protein EngB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16480..17826
DNA (1347bp) protein (449aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Glutamyl-tRNA reductase n=16 Tax=Staphylococcus epidermidis RepID=D4FIF2_STAEP
hemA; glutamyl-tRNA reductase rbh
64_006_scaffold_69_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17848..18660
DNA (813bp) protein (271aa)
HemA concentration negative effector n=41 Tax=Staphylococcus epidermidis RepID=Q8CNY7_STAES
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
Cytochrome c assembly protein {ECO:0000313|EMBL:EFE59872.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_18

Not on your lists

18714..19640
DNA (927bp) protein (309aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61) rbh
Porphobilinogen deaminase n=49 Tax=Staphylococcus epidermidis RepID=HEM3_STAEQ rbh
Porphobilinogen deaminase {ECO:0000313|EMBL:ETJ18387.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_69_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19674..20354
DNA (681bp) protein (227aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EFE59874.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EFE59874.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=16 Tax=Staphylococcus epidermidis RepID=D4FIF5_STAEP
64_006_scaffold_69_20

Not on your lists

20344..21318
DNA (975bp) protein (325aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=43 Tax=Staphylococcus epidermidis RepID=HEM2_STAEQ rbh
Delta-aminolevulinic acid dehydratase {ECO:0000313|EMBL:ETJ18385.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_69_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21339..22625
DNA (1287bp) protein (429aa)
Glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase 1 {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA 1 {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase 1 {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA-AT 1 {ECO:0000255|HAMAP-Rule:MF_00375};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Glutamate-1-semialdehyde 2,1-aminomutase 1 n=42 Tax=Staphylococcus epidermidis RepID=GSA1_STAEQ
64_006_scaffold_69_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23080..24099
DNA (1020bp) protein (340aa)
Membrane protein, putative n=40 Tax=Staphylococcus epidermidis RepID=Q5HNN7_STAEQ
hypothetical protein
Putative membrane protein AbrB {ECO:0000313|EMBL:EFE59877.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24266..24865)
DNA (600bp) protein (200aa)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EFE59878.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EFE59878.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
DNA-3-methyladenine glycosylase (EC:3.2.2.20)
Methyladenine glycosylase n=1 Tax=Staphylococcus epidermidis VCU123 RepID=H3VVV3_STAEP
64_006_scaffold_69_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


25169..27799
DNA (2631bp) protein (877aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=38 Tax=Staphylococcus epidermidis RepID=SYV_STAEQ rbh
64_006_scaffold_69_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27810..29075
DNA (1266bp) protein (422aa)
Bifunctional protein FolC {ECO:0000313|EMBL:EFE59880.1}; EC=6.3.2.17 {ECO:0000313|EMBL:EFE59880.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Folylpolyglutamate synthase/dihydrofolate synthase n=43 Tax=Staphylococcus epidermidis RepID=Q5HNP0_STAEQ
folC; bifunctional FolC family protein
64_006_scaffold_69_26

Not on your lists

29259..29969
DNA (711bp) protein (237aa)
Type IV prepilin peptidase n=35 Tax=Staphylococcus epidermidis RepID=Q8CNZ3_STAES
Late competence protein ComC, processing protease
A24 family peptidase {ECO:0000313|EMBL:ETJ18379.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_69_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29981..30646
DNA (666bp) protein (222aa)
UPF0758 protein SE_1336 n=44 Tax=Staphylococcus epidermidis RepID=Y1336_STAES rbh
DNA repair protein RadC
UPF0758 protein SE_1336; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
64_006_scaffold_69_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30710..30889)
DNA (180bp) protein (60aa)
Uncharacterized protein n=50 Tax=Staphylococcus epidermidis RepID=Q5HNP9_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54553.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_006_scaffold_69_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31054..31539
DNA (486bp) protein (162aa)
Uncharacterized protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HNQ0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59884.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_69_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31623..31763
DNA (141bp) protein (47aa)
Uncharacterized protein n=53 Tax=Staphylococcus epidermidis RepID=Q5HNQ1_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54551.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Displaying items 1-30 of 43 in total

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