ggKbase home page

64_006_scaffold_250

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_250_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..416)
DNA (414bp) protein (138aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Staphylococcus epidermidis VCU144 RepID=F3SWE4_STAEP
Putative polyribitolphosphotransferase
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:EFE58371.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
64_006_scaffold_250_2

Not on your lists

comp(433..1464)
DNA (1032bp) protein (344aa)
GroES-like protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0TWK6_STAEP
xylitol dehydrogenase rbh
Ribitol-5-phosphate 2-dehydrogenase {ECO:0000313|EMBL:ETJ20168.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_006_scaffold_250_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1457..2173)
DNA (717bp) protein (239aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=9 Tax=Staphylococcus epidermidis RepID=ISPD_STAEQ rbh
64_006_scaffold_250_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2444..3520)
DNA (1077bp) protein (359aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase n=3 Tax=Staphylococcus epidermidis RepID=C5QUS1_STAEP
64_006_scaffold_250_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3940..4935)
DNA (996bp) protein (332aa)
NAD dependent epimerase/dehydratase family protein n=15 Tax=Staphylococcus epidermidis RepID=C5QUS0_STAEP
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ESV18645.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
UDP-glucose 4-epimerase
64_006_scaffold_250_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5493..6443)
DNA (951bp) protein (317aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ESV18683.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ESV18683.1};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=22 Tax=Staphylococcus epidermidis RepID=H0DW42_STAEP
64_006_scaffold_250_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6697..7206)
DNA (510bp) protein (170aa)
Acetyltransferase, GNAT family n=19 Tax=Staphylococcus epidermidis RepID=C5QUR6_STAEP
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EES36973.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Acetyltransferase, GNAT family
64_006_scaffold_250_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7720..8907
DNA (1188bp) protein (396aa)
N-acetyl-L,L-diaminopimelate deacetylase homolog (EC:3.5.1.18)
Amidohydrolase n=29 Tax=Staphylococcus RepID=C5Q6M4_STAEP
Amidohydrolase {ECO:0000313|EMBL:EES36972.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
64_006_scaffold_250_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9032..10216)
DNA (1185bp) protein (395aa)
Elongation factor Tu n=124 Tax=Staphylococcus RepID=EFTU_STAEQ
Translation elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
64_006_scaffold_250_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10435..12516)
DNA (2082bp) protein (694aa)
Elongation factor G n=78 Tax=Staphylococcus RepID=EFG_STAEQ rbh
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Translation elongation factor G
64_006_scaffold_250_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(12636..13106)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=513 Tax=Staphylococcus RepID=RS7_STAA1 rbh
rpsG; ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
64_006_scaffold_250_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(13177..13590)
DNA (414bp) protein (138aa)
30S ribosomal protein S12 n=71 Tax=Staphylococcus epidermidis RepID=RS12_STAEQ
SSU ribosomal protein S12p (S23e)
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
64_006_scaffold_250_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13681..13941)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E7B6_STAEP
50S ribosomal protein L7 {ECO:0000313|EMBL:ESV19933.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Firmicutes ribosomal L7Ae family protein
64_006_scaffold_250_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14269..16629)
DNA (2361bp) protein (787aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Staphylococcus epidermidis RepID=J0FCM3_STAEP
Displaying 14 items

View Taxonomy