ggKbase home page

64_006_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 105 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_10_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(302..514)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=8 Tax=Enterobacteriaceae RepID=G9S904_CITFR
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
rpmE; 50S ribosomal protein L31
64_006_scaffold_10_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

719..2917
DNA (2199bp) protein (733aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Primosome assembly protein PriA n=2 Tax=Citrobacter RepID=K8QQF2_CITFR
primosome assembly protein PriA
64_006_scaffold_10_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3245..4099
DNA (855bp) protein (285aa)
Transcriptional repressor CytR n=6 Tax=Citrobacter RepID=J0VNF2_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KJC07442.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_006_scaffold_10_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4298..5167
DNA (870bp) protein (290aa)
Cell division protein ftsN n=2 Tax=Citrobacter RepID=R8UXE7_9ENTR
Cell division protein FtsN {ECO:0000313|EMBL:KJC04015.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cell division protein FtsN
64_006_scaffold_10_5
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5259..5789
DNA (531bp) protein (177aa)
ATP-dependent protease subunit HslV (EC:3.4.25.1)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
ATP-dependent protease subunit HslV n=11 Tax=Enterobacteriaceae RepID=C1MFY6_9ENTR
64_006_scaffold_10_6
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5799..7130
DNA (1332bp) protein (444aa)
ATP-dependent protease ATPase subunit HslU n=11 Tax=Enterobacteriaceae RepID=C1MFY5_9ENTR
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hslU; ATP-dependent protease ATP-binding subunit HslU
64_006_scaffold_10_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7198..8127
DNA (930bp) protein (310aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=6 Tax=Citrobacter RepID=J0M239_9ENTR
1,4-dihydroxy-2-naphthoate octaprenyltransferase
64_006_scaffold_10_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8220..8705
DNA (486bp) protein (162aa)
Regulator of ribonuclease activity A n=7 Tax=Enterobacteriaceae RepID=I6HEY6_SHIFL
Regulator of ribonuclease activity A {ECO:0000256|HAMAP-Rule:MF_00471, ECO:0000256|SAAS:SAAS00043861}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ribonuclease activity regulator protein RraA
64_006_scaffold_10_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8865..9608
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=Citrobacter RepID=K8QLN4_CITFR
Oxidoreductase {ECO:0000313|EMBL:KJC07436.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
short-chain dehydrogenase/reductase SDR
64_006_scaffold_10_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9811..10050)
DNA (240bp) protein (80aa)
Cell division protein ZapB n=6 Tax=Citrobacter RepID=J1FZQ9_9ENTR
Cell division protein ZapB {ECO:0000256|HAMAP-Rule:MF_01196, ECO:0000256|SAAS:SAAS00064905}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
septal ring assembly protein ZapB
64_006_scaffold_10_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10485..11330
DNA (846bp) protein (282aa)
GlpF n=6 Tax=Citrobacter RepID=J0M235_9ENTR
Glycerol uptake facilitator protein {ECO:0000313|EMBL:CDL38467.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
glycerol uptake facilitator GlpF
64_006_scaffold_10_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11352..12860
DNA (1509bp) protein (503aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=7 Tax=Citrobacter RepID=C1MFY0_9ENTR
64_006_scaffold_10_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12996..14006
DNA (1011bp) protein (337aa)
Fructose-1,6-bisphosphatase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3B994_CITFR
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fructose 1,6-bisphosphatase
64_006_scaffold_10_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14102..14848
DNA (747bp) protein (249aa)
Ferredoxin--NADP reductase {ECO:0000313|EMBL:KEL77778.1}; EC=1.18.1.2 {ECO:0000313|EMBL:KEL77778.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Ferredoxin-NADP reductase n=3 Tax=Citrobacter RepID=K8QLM9_CITFR
ferredoxin-NADP reductase
64_006_scaffold_10_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14912..15340)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QNX3_CITFR
Membrane protein {ECO:0000313|EMBL:KJC07431.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
64_006_scaffold_10_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15441..16037
DNA (597bp) protein (199aa)
Periplasmic protein n=5 Tax=Citrobacter RepID=J0M230_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67092.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_006_scaffold_10_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16037..16147
DNA (111bp) protein (37aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J0VND9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67091.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_006_scaffold_10_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16149..16916
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Triosephosphate isomerase; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=13 Tax=Enterobacteriaceae RepID=C1MFX5_9ENTR
64_006_scaffold_10_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16956..18428)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UI51_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67089.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
C4-dicarboxylate ABC transporter
64_006_scaffold_10_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18538..19842)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QLM5_CITFR
Citrate transporter {ECO:0000313|EMBL:KJC04029.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
citrate transporter
64_006_scaffold_10_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19916..20665)
DNA (750bp) protein (250aa)
CDP-diacylglycerol pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00319}; EC=3.6.1.26 {ECO:0000256|HAMAP-Rule:MF_00319};; CDP-diacylglycerol phosphatidylhydrolase {ECO:0000256|HAMAP-Rule:MF_00319}; CDP-diglyceride hydrolase {ECO:0000256|HAMAP-Rule:MF_00319}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
CDP-diacylglycerol pyrophosphatase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UJ05_9ENTR
CDP-diacylglycerol pyrophosphatase
64_006_scaffold_10_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20770..21759)
DNA (990bp) protein (330aa)
Sulfate transporter subunit n=3 Tax=Citrobacter RepID=K8QUX3_CITFR
Sulfate transporter subunit {ECO:0000313|EMBL:KJC04031.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sulfate transporter subunit
64_006_scaffold_10_23
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21963..22925)
DNA (963bp) protein (321aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=9 Tax=Citrobacter RepID=J1FZX2_9ENTR
64_006_scaffold_10_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23109..24011)
DNA (903bp) protein (301aa)
Cation-efflux pump FieF n=6 Tax=Citrobacter RepID=J0LVR6_9ENTR
Cation-efflux pump FieF {ECO:0000256|HAMAP-Rule:MF_01425}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
fieF; ferrous iron transporter
64_006_scaffold_10_25
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24249..24881)
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=U9UXB8_ECOLX
Type VI secretion-associated protein {ECO:0000313|EMBL:EOQ44877.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
hypothetical protein
64_006_scaffold_10_26
Serratia odorifera, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24893..25225)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=U9UXF5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFE97094.1}; TaxID=667129 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia odorifera DSM 4582.;"
hypothetical protein
64_006_scaffold_10_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25327..25569)
DNA (243bp) protein (81aa)
Phage transcriptional activator, Ogr/Delta n=6 Tax=Escherichia coli RepID=E9UEV2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK19173.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Ogr/Delta-like zinc finger
64_006_scaffold_10_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25618..26736)
DNA (1119bp) protein (373aa)
Phage late control protein D protein n=1 Tax=Escherichia coli 2.4168 RepID=I2YCG1_ECOLX
Phage late regulator {ECO:0000313|EMBL:EOW27333.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE108.;"
phage protein D
64_006_scaffold_10_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26894..28087
DNA (1194bp) protein (398aa)
Putative phage tail sheath protein n=1 Tax=Escherichia coli 2.4168 RepID=I2YCG2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK19175.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
phage tail sheath protein FI
64_006_scaffold_10_30
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28100..28615
DNA (516bp) protein (172aa)
Phage major tail tube protein n=3 Tax=Enterobacteriaceae RepID=I2YCF4_ECOLX
Phage major tail tube protein {ECO:0000313|EMBL:ESM34627.1}; TaxID=1329845 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae BWH 31.;"
phage contractile tail tube protein, P2 family
Displaying items 1-30 of 105 in total

View Taxonomy