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64_006_scaffold_41

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Displaying items 1-30 of 302 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_41_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(306..1556)
DNA (1251bp) protein (417aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=10 Tax=Citrobacter RepID=C1M3F5_9ENTR
64_006_scaffold_41_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1759..2382
DNA (624bp) protein (208aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Pseudouridine synthase n=3 Tax=Citrobacter RepID=J0MAH8_9ENTR
23S rRNA pseudouridylate synthase
64_006_scaffold_41_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2417..3355
DNA (939bp) protein (313aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J0VWD9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC03524.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_006_scaffold_41_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3365..3826
DNA (462bp) protein (154aa)
Phosphatase NudJ n=3 Tax=Citrobacter RepID=J1G7R4_9ENTR
Nudix-like NDP and NTP phosphohydrolase YmfB {ECO:0000313|EMBL:CDL38700.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
phosphatase
64_006_scaffold_41_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3880..4986
DNA (1107bp) protein (369aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
mnmA; tRNA 2-thiouridylase (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA n=5 Tax=Citrobacter RepID=C1M3F1_9ENTR
64_006_scaffold_41_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5021..5662
DNA (642bp) protein (214aa)
High frequency lysogenization protein HflD homolog n=3 Tax=Citrobacter RepID=K8QL90_CITFR
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lysogenization regulator
64_006_scaffold_41_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5666..7036
DNA (1371bp) protein (457aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:KJC09643.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KJC09643.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BC60_CITFR
64_006_scaffold_41_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7455..7994
DNA (540bp) protein (180aa)
Cytochrome b561 n=1 Tax=Citrobacter sp. KTE30 RepID=R8UWN4_9ENTR
Hydrogenase {ECO:0000313|EMBL:KJC09642.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putative cytochrome
64_006_scaffold_41_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8004..8249)
DNA (246bp) protein (82aa)
DNA-damage-inducible protein I n=1 Tax=Shigella flexneri 1235-66 RepID=I6HH41_SHIFL
XRE family transcriptional regulator {ECO:0000313|EMBL:KJC09641.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
XRE family transcriptional regulator
64_006_scaffold_41_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8493..9149
DNA (657bp) protein (219aa)
Thermostable hemolysin n=2 Tax=Citrobacter RepID=K8QVU7_CITFR
Thermostable hemolysin {ECO:0000313|EMBL:KJC09640.2}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
thermostable hemolysin
64_006_scaffold_41_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9130..10572
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UXR2_9ENTR
AMP-dependent synthetase {ECO:0000313|EMBL:KJC09639.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
AMP-dependent synthetase and ligase
64_006_scaffold_41_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10569..11234
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UW16_9ENTR
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KKC28305.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putative transcriptional activator, TenA family
64_006_scaffold_41_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11221..12027
DNA (807bp) protein (269aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS67_CITFR
Short-chain dehydrogenase {ECO:0000313|EMBL:KKC28304.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
short-chain dehydrogenase/reductase SDR
64_006_scaffold_41_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12024..12644
DNA (621bp) protein (207aa)
TPR repeat-containing protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QMQ4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC09732.2}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
TPR repeat-containing protein
64_006_scaffold_41_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12799..13713
DNA (915bp) protein (305aa)
Integrase n=1 Tax=Citrobacter sp. KTE30 RepID=R8V150_9ENTR
Integrase {ECO:0000313|EMBL:KJC09731.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_006_scaffold_41_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13777..13968
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QVU1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KKC28303.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_006_scaffold_41_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14042..14713
DNA (672bp) protein (224aa)
DNA-binding transcriptional regulator PhoP n=5 Tax=Citrobacter RepID=J0VWD5_9ENTR
Transcriptional regulatory protein PhoP {ECO:0000313|EMBL:CDL40186.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator
64_006_scaffold_41_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14713..16176
DNA (1464bp) protein (488aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Sensor protein PhoQ n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QL79_CITFR
sensor protein PhoQ
64_006_scaffold_41_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16269..17390
DNA (1122bp) protein (374aa)
Cupin family protein n=7 Tax=Citrobacter RepID=J0M3S1_9ENTR
Cupin 4 family protein {ECO:0000313|EMBL:ETX70538.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_006_scaffold_41_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17493..18719)
DNA (1227bp) protein (409aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Peptidase T n=1 Tax=Citrobacter sp. KTE30 RepID=R8UWX6_9ENTR
peptidase T
64_006_scaffold_41_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18970..20106
DNA (1137bp) protein (379aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Putrescine/spermidine ABC transporter ATPase n=6 Tax=Citrobacter RepID=J0MAG5_9ENTR
potA; putrescine/spermidine ABC transporter ATPase
64_006_scaffold_41_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20090..20947
DNA (858bp) protein (286aa)
Spermidine/putrescine transport system permease protein PotB n=5 Tax=Citrobacter RepID=J0VWD1_9ENTR
potB; spermidine/putrescine ABC transporter permease
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AHY12912.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
64_006_scaffold_41_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20944..21723
DNA (780bp) protein (260aa)
Spermidine/putrescine transport system permease potC n=10 Tax=Enterobacteriaceae RepID=G9SI61_CITFR
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KJC09835.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
potC; spermidine/putrescine ABC transporter permease
64_006_scaffold_41_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21748..22797
DNA (1050bp) protein (350aa)
Putrescine-binding periplasmic protein n=8 Tax=Citrobacter RepID=C1M3E1_9ENTR
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
potD; spermidine/putrescine ABC transporter substrate-binding protein
64_006_scaffold_41_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22897..23718)
DNA (822bp) protein (274aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
NAD-dependent protein deacylase n=6 Tax=Citrobacter RepID=J1G7I8_9ENTR
NAD-dependent deacetylase
64_006_scaffold_41_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23734..24645)
DNA (912bp) protein (304aa)
N-acetyl-D-glucosamine kinase {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012116}; EC=2.7.1.59 {ECO:0000256|HAMAP-Rule:MF_01271};; GlcNAc kinase {ECO:0000256|HAMAP-Rule:MF_01271}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
N-acetylglucosamine kinase (EC:2.7.1.59)
N-acetyl-D-glucosamine kinase n=6 Tax=Citrobacter RepID=J0MAF9_9ENTR
64_006_scaffold_41_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24735..25979)
DNA (1245bp) protein (415aa)
Lipoprotein-releasing system transmembrane protein lolE n=7 Tax=Citrobacter RepID=G9SI57_CITFR
Liporeleasing system, transmembrane protein LolE {ECO:0000313|EMBL:KEL82444.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
outer membrane-specific lipoprotein transporter subunit LolE
64_006_scaffold_41_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25979..26680)
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Lipoprotein transporter ATP-binding subunit n=6 Tax=Citrobacter RepID=J1G7Q3_9ENTR
lolD; lipoprotein ABC transporter ATP-binding protein
64_006_scaffold_41_29
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26673..27962)
DNA (1290bp) protein (430aa)
Outer membrane-specific lipoprotein transporter subunit LolC n=9 Tax=Enterobacteriaceae RepID=J0M3R0_9ENTR
Lipoprotein-releasing system transmembrane protein lolC {ECO:0000313|EMBL:EOQ50795.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
outer membrane-specific lipoprotein transporter subunit LolC
64_006_scaffold_41_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28134..29198
DNA (1065bp) protein (355aa)
Putative acyltransferase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CBG0_CITFR
Membrane protein {ECO:0000313|EMBL:KJC11647.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
Displaying items 1-30 of 302 in total

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