ggKbase home page

64_006_scaffold_103

Search features with annotation key words

Displaying items 1-30 of 32 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_103_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98..613
DNA (516bp) protein (172aa)
Mg(2+) transport ATPase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D0Z6_CITFR
Magnesium transporter ATPase {ECO:0000313|EMBL:KJC05083.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Mg(2+) transport ATPase
64_006_scaffold_103_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(804..1334)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BI40_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05084.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
dctR; transcriptional regulator DctR
64_006_scaffold_103_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1447..2337
DNA (891bp) protein (297aa)
Helix-turn-helix domain-containing protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CH79_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05085.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putative AraC family transcriptional regulator
64_006_scaffold_103_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2450..2989
DNA (540bp) protein (180aa)
Nucleoprotein/polynucleotide-associated enzyme n=2 Tax=Citrobacter RepID=K8QSI6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05086.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_006_scaffold_103_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3095..4342)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0X1_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC05087.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
64_006_scaffold_103_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4332..6341)
DNA (2010bp) protein (670aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D0Z0_CITFR
histidine kinase
64_006_scaffold_103_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6338..7600)
DNA (1263bp) protein (421aa)
Phosphoglycerate transport regulatory protein pgtC n=2 Tax=Citrobacter RepID=R8UT99_9ENTR
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC07984.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ABC transporter substrate-binding protein
64_006_scaffold_103_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7953..9344
DNA (1392bp) protein (464aa)
Phosphoglycerate transporter protein PgtP n=2 Tax=Citrobacter RepID=K8QX60_CITFR
Phosphoglycerate transporter family protein {ECO:0000313|EMBL:KEL80834.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
phosphoglycerate transporter
64_006_scaffold_103_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9451..9693)
DNA (243bp) protein (81aa)
Inner membrane protein n=6 Tax=Citrobacter RepID=J0LVX5_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC05090.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
64_006_scaffold_103_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10134..11054
DNA (921bp) protein (307aa)
Lipid A biosynthesis palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; EC=2.3.1.242 {ECO:0000256|HAMAP-Rule:MF_01943};; Kdo(2)-lipid IV(A) palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Lipid A biosynthesis palmitoleoyl acyltransferase n=2 Tax=Citrobacter RepID=M3DQD5_CITFR
lipid A biosynthesis palmitoleoyl acyltransferase
64_006_scaffold_103_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11096..11698)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QNW6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX69726.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_006_scaffold_103_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12194..13432)
DNA (1239bp) protein (413aa)
Aminotransferase n=6 Tax=Citrobacter RepID=J0M294_9ENTR
Aminotransferase {ECO:0000313|EMBL:ETX69727.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
glutamate-pyruvate aminotransferase
64_006_scaffold_103_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13820..15517
DNA (1698bp) protein (566aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=M3CH69_CITFR
Inner membrane protein ypdA {ECO:0000313|EMBL:ETX69728.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
64_006_scaffold_103_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15532..16266
DNA (735bp) protein (245aa)
Protein mrkE n=1 Tax=Citrobacter sp. KTE30 RepID=R8USH5_9ENTR
LytTR family transcriptional regulator {ECO:0000313|EMBL:KJC05095.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LytTR family transcriptional regulator
64_006_scaffold_103_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16282..17145
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0W2_CITFR
AraC family transcriptional regulator {ECO:0000313|EMBL:KJC05096.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
AraC family transcriptional regulator
64_006_scaffold_103_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17183..17566)
DNA (384bp) protein (128aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=J0VNK8_9ENTR
Cupin {ECO:0000313|EMBL:KJC05097.2}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_006_scaffold_103_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17944..20439)
DNA (2496bp) protein (832aa)
Mulitfunctional phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system fructose-like transporter subunit IIA n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQY8_CITFR
PTS fructose transporter subunit IIA {ECO:0000313|EMBL:KJC05098.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
PTS fructose transporter subunit IIA
64_006_scaffold_103_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20463..21503)
DNA (1041bp) protein (347aa)
Aminopeptidase ypdE n=1 Tax=Citrobacter sp. KTE30 RepID=R8UT80_9ENTR
Aminopeptidase {ECO:0000313|EMBL:KKC28338.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
aminopeptidase
64_006_scaffold_103_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21503..22588)
DNA (1086bp) protein (362aa)
Aminopeptidase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DPA5_CITFR
Aminopeptidase {ECO:0000313|EMBL:KJC04955.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
aminopeptidase
64_006_scaffold_103_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22606..23853)
DNA (1248bp) protein (416aa)
Fructose-like permease IIC component n=6 Tax=Citrobacter RepID=J1G043_9ENTR
Fructose-like permease IIC component {ECO:0000313|EMBL:ETX69735.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
PTS fructose transporter subunit IIC
64_006_scaffold_103_21
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23874..24200)
DNA (327bp) protein (109aa)
Fructose-like phosphotransferase enzyme IIB component 1 {ECO:0000313|EMBL:EIQ79003.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EIQ79003.1};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
PTS system, Fru family, IIB component n=11 Tax=Enterobacteriaceae RepID=D4B728_9ENTR
PTS fructose transporter subunit IIB
64_006_scaffold_103_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24391..25356)
DNA (966bp) protein (322aa)
Glucokinase {ECO:0000256|HAMAP-Rule:MF_00524}; EC=2.7.1.2 {ECO:0000256|HAMAP-Rule:MF_00524};; Glucose kinase {ECO:0000256|HAMAP-Rule:MF_00524}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
glk; glucokinase (EC:2.7.1.2)
Glucokinase n=8 Tax=Citrobacter RepID=C1M795_9ENTR
64_006_scaffold_103_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25561..26796
DNA (1236bp) protein (412aa)
Putative ion-transport protein WYG_3107 n=3 Tax=Citrobacter RepID=J1FZX8_9ENTR
Putative ion-transport protein TN42_17710 {ECO:0000256|HAMAP-Rule:MF_01115}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ion channel protein
64_006_scaffold_103_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26797..28449)
DNA (1653bp) protein (551aa)
Indole-3-pyruvate decarboxylase {ECO:0000313|EMBL:KEL80816.1}; EC=4.1.1.74 {ECO:0000313|EMBL:KEL80816.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Indolepyruvate decarboxylase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSG8_CITFR
indolepyruvate decarboxylase
64_006_scaffold_103_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28631..29620
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3DQC4_CITFR
Putative oxidoreductase {ECO:0000313|EMBL:KEL80815.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L-glyceraldehyde 3-phosphate reductase
64_006_scaffold_103_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29758..30090
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QNV4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC07896.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_006_scaffold_103_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30123..31361)
DNA (1239bp) protein (413aa)
Divalent metal cation transporter MntH n=6 Tax=Citrobacter RepID=J0M2A9_9ENTR
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
manganese transport protein MntH
64_006_scaffold_103_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31705..32907
DNA (1203bp) protein (401aa)
Nucleoside permease n=6 Tax=Citrobacter RepID=J1FZY3_9ENTR
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Nucleoside permease NupC
64_006_scaffold_103_trna_2
unknown

Not on your lists

comp(33055..33127)
DNA (73bp)
transferRNA Ala
64_006_scaffold_103_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33320..33682
DNA (363bp) protein (121aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=C1MGD5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04964.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy