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64_006_scaffold_132

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_132_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(73..807)
DNA (735bp) protein (245aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
tRNA (guanine-N(1)-)-methyltransferase n=7 Tax=Citrobacter RepID=C1MA89_9ENTR
trmD; tRNA (guanine-N1)-methyltransferase
64_006_scaffold_132_2
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(866..1414)
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM n=10 Tax=Citrobacter RepID=C1MA90_9ENTR
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
64_006_scaffold_132_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1433..1681)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=12 Tax=Enterobacteriaceae RepID=D4BHQ5_9ENTR
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_006_scaffold_132_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1935..3296)
DNA (1362bp) protein (454aa)
Signal recognition particle protein n=8 Tax=Citrobacter RepID=C1MA92_9ENTR
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
signal recognition particle
64_006_scaffold_132_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3462..4253
DNA (792bp) protein (264aa)
Inner membrane protein ypjD n=10 Tax=Citrobacter RepID=C1MA93_9ENTR
Inner membrane protein ypjD {ECO:0000313|EMBL:ETX69938.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
64_006_scaffold_132_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4272..5561
DNA (1290bp) protein (430aa)
UPF0053 inner membrane protein yfjD n=4 Tax=Citrobacter RepID=J0LS47_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC12995.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_006_scaffold_132_7
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5611..6204)
DNA (594bp) protein (198aa)
Protein GrpE n=8 Tax=Citrobacter RepID=J1FVX8_9ENTR
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
heat shock protein GrpE
64_006_scaffold_132_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6327..7205
DNA (879bp) protein (293aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ppnK; NAD(+) kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=6 Tax=Citrobacter RepID=J0LYA5_9ENTR
64_006_scaffold_132_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7291..8952
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=1 Tax=Citrobacter freundii RepID=C1IG41_CITFR
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
recombination and repair protein
64_006_scaffold_132_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9102..9446
DNA (345bp) protein (115aa)
Outer membrane protein assembly factor BamE n=6 Tax=Enterobacteriaceae RepID=G9SAP5_CITFR
membrane biogenesis protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
64_006_scaffold_132_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9497..9793)
DNA (297bp) protein (99aa)
Protein RnfH 2 n=5 Tax=Enterobacteriaceae RepID=I6GYH4_SHIFL
UPF0125 protein P834_07805 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_006_scaffold_132_12
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9777..10220)
DNA (444bp) protein (148aa)
Polyketide cyclase dehydrase and lipid transport family protein n=7 Tax=Citrobacter RepID=J1FVX2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EOQ47366.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
hypothetical protein
64_006_scaffold_132_13
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10375..10857
DNA (483bp) protein (161aa)
SsrA-binding protein n=13 Tax=Enterobacteriaceae RepID=C1MAA1_9ENTR
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
smpB; SsrA-binding protein
64_006_scaffold_132_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11441..22645
DNA (11205bp) protein (3735aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UND5_9ENTR
Large repetitive protein {ECO:0000313|EMBL:KJC07278.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
large repetitive protein
64_006_scaffold_132_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22746..24155
DNA (1410bp) protein (470aa)
Type I secretion outer membrane protein TolC family n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R092_CITFR
Type I secretion outer membrane , TolC family protein {ECO:0000313|EMBL:KEL78391.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
type I secretion protein TolC
64_006_scaffold_132_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24152..26338
DNA (2187bp) protein (729aa)
Protein secretion abc efflux permease and atp-binding protein n=3 Tax=Citrobacter RepID=J0VIY9_9ENTR
ATP-binding protein {ECO:0000313|EMBL:KJC07280.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ATP-binding protein
64_006_scaffold_132_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26319..27509
DNA (1191bp) protein (397aa)
HlyD family type I secretion membrane fusion protein n=6 Tax=Citrobacter RepID=C1MAA5_9ENTR
HlyD family type I secretion membrane fusion protein {ECO:0000313|EMBL:ETX61859.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
secretion protein HlyD
64_006_scaffold_132_18
Yersinia ruckeri, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27981..28271
DNA (291bp) protein (97aa)
Integrase n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8W9Q0_KLEOK
integrase
Integrase {ECO:0000313|EMBL:KFE40083.1}; TaxID=29486 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia ruckeri.;"
64_006_scaffold_132_19
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28169..28789)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 RepID=V1NMT2_SALRU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJP52568.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
64_006_scaffold_132_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29473..29829
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V765_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13470.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein
64_006_scaffold_132_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29888..31321)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V761_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13471.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
diguanylate phosphodiesterase
64_006_scaffold_132_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31439..38377)
DNA (6939bp) protein (2313aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V6F6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13472.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein
64_006_scaffold_132_23
unknown

Not on your lists

38795..38929
DNA (135bp) protein (45aa)

This feature has no annotations

64_006_scaffold_132_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39344..40114
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8V802_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13473.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
yqeI; transcriptional Regulator CadC
64_006_scaffold_132_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40104..40616
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8VBQ5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF13474.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
64_006_scaffold_132_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40723..41541)
DNA (819bp) protein (273aa)
5-deoxy-glucuronate isomerase n=3 Tax=Citrobacter RepID=J0M041_9ENTR
KduI/IolB family protein {ECO:0000313|EMBL:KEL78442.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
5-deoxy-glucuronate isomerase
64_006_scaffold_132_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41551..42441)
DNA (891bp) protein (297aa)
Inosose dehydratase {ECO:0000313|EMBL:CDL41993.1}; EC=4.2.1.44 {ECO:0000313|EMBL:CDL41993.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Xylose isomerase domain-containing protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CEL1_CITFR
xylose isomerase domain-containing protein
64_006_scaffold_132_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42456..44360)
DNA (1905bp) protein (635aa)
Ribokinase pfkb n=2 Tax=Citrobacter RepID=J0M6N2_9ENTR
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:KJC07289.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
5-dehydro-2-deoxygluconokinase
64_006_scaffold_132_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44373..45506)
DNA (1134bp) protein (378aa)
Oxidoreductase domain-containing protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CY47_CITFR
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:KJC13023.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
oxidoreductase domain-containing protein
64_006_scaffold_132_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45515..46543)
DNA (1029bp) protein (343aa)
Sugar transport system permease n=5 Tax=Citrobacter RepID=J1G496_9ENTR
Sugar ABC transporter permease {ECO:0000313|EMBL:KJC13024.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
inner-membrane translocator
Displaying items 1-30 of 37 in total

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