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64_006_scaffold_175

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_175_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(165..1550)
DNA (1386bp) protein (462aa)
Proline-specific permease n=4 Tax=Citrobacter RepID=J1FZI6_9ENTR
D-alanine/D-serine/glycine permease {ECO:0000313|EMBL:KJC06349.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
D-alanine/D-serine/glycine permease
64_006_scaffold_175_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1828..2568)
DNA (741bp) protein (247aa)
UDP-N-acetyl-D-mannosaminuronic acid transferase {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014171}; Short=UDP-ManNAcA transferase {ECO:0000256|HAMAP-Rule:MF_01001};; EC=2.4.1.180 {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014176};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
UDP-N-acetyl-D-mannosaminuronic acid transferase n=7 Tax=Bacteria RepID=C1MG49_9ENTR
UDP-N-acetyl-D-mannosaminuronic acid transferase
64_006_scaffold_175_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2568..3923)
DNA (1356bp) protein (452aa)
Putative ECA polymerase n=6 Tax=Citrobacter RepID=J1FZB5_9ENTR
Probable ECA polymerase {ECO:0000256|HAMAP-Rule:MF_01003, ECO:0000256|SAAS:SAAS00275810}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
common antigen polymerase
64_006_scaffold_175_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3920..4999)
DNA (1080bp) protein (360aa)
TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151893}; EC=2.4.1.325 {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151892};; 4-alpha-L-fucosyltransferase {ECO:0000256|HAMAP-Rule:MF_01002}; TDP-Fuc4NAc:lipid II Fuc4NAc transferase {ECO:0000256|HAMAP-Rule:MF_01002}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
4-alpha-L-fucosyltransferase n=3 Tax=Citrobacter RepID=K8QJU8_CITFR
4-alpha-L-fucosyltransferase
64_006_scaffold_175_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4996..6246)
DNA (1251bp) protein (417aa)
Protein wzxE n=5 Tax=Citrobacter RepID=C1MG46_9ENTR
O-antigen translocase {ECO:0000313|EMBL:KJC03934.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
O-antigen translocase
64_006_scaffold_175_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6248..7378)
DNA (1131bp) protein (377aa)
TDP-4-oxo-6-deoxy-D-glucose transaminase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DSQ8_CITFR
TDP-4-oxo-6-deoxy-D-glucose aminotransferase {ECO:0000313|EMBL:KJC03935.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
TDP-4-oxo-6-deoxy-D-glucose aminotransferase
64_006_scaffold_175_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7383..8060)
DNA (678bp) protein (226aa)
TDP-D-fucosamine acetyltransferase n=3 Tax=Citrobacter RepID=J0LVC6_9ENTR
TDP-D-fucosamine acetyltransferase {ECO:0000313|EMBL:ETX67705.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
TDP-fucosamine acetyltransferase
64_006_scaffold_175_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8038..8919)
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Citrobacter RepID=J1FZB1_9ENTR
glucose-1-phosphate thymidylyltransferase
64_006_scaffold_175_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8953..10020)
DNA (1068bp) protein (356aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
dTDP-glucose 4,6-dehydratase n=3 Tax=Citrobacter RepID=J0M1L6_9ENTR
dTDP-glucose 4,6-dehydratase
64_006_scaffold_175_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10020..11282)
DNA (1263bp) protein (421aa)
UDP-N-acetyl-D-mannosamine dehydrogenase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWX8_CITFR
UDP-N-acetyl-D-mannosamine dehydrogenase {ECO:0000313|EMBL:KJC03937.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
wecC; UDP-N-acetyl-D-mannosamine dehydrogenase
64_006_scaffold_175_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11279..12364)
DNA (1086bp) protein (362aa)
UDP-N-acetylglucosamine 2-epimerase n=3 Tax=Citrobacter RepID=R1FU23_CITFR
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KJC03938.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
UDP-N-acetylglucosamine 2-epimerase
64_006_scaffold_175_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12465..13511)
DNA (1047bp) protein (349aa)
Lipopolysaccharide biosynthesis protein wzzE n=2 Tax=Citrobacter freundii RepID=G9SDK5_CITFR
Lipopolysaccharide biosynthesis protein wzzE {ECO:0000313|EMBL:ETX60964.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
lipopolysaccharide biosynthesis protein WzzE
64_006_scaffold_175_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13524..14627)
DNA (1104bp) protein (368aa)
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase n=4 Tax=Citrobacter RepID=J1FZA4_9ENTR
UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:KJC03940.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase
64_006_scaffold_175_14
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14866..16125)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Transcription termination factor Rho n=16 Tax=Enterobacteriaceae RepID=A8ACT5_CITK8
rho; transcription termination factor Rho
64_006_scaffold_175_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16463..16792)
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Escherichia coli MS 21-1 RepID=D8ADY2_ECOLX
Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
64_006_scaffold_175_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16936..18204
DNA (1269bp) protein (423aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ATP-dependent RNA helicase RhlB n=6 Tax=Citrobacter RepID=J1FZG9_9ENTR
ATP-dependent RNA helicase RhlB
64_006_scaffold_175_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18341..19822
DNA (1482bp) protein (494aa)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181013}; EC=3.6.1.40 {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181014};; Guanosine pentaphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; pppGpp-5'-phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
guanosine polyphosphate pyrophosphohydrolase (EC:3.6.1.40)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase n=2 Tax=Citrobacter RepID=M3DRL0_CITFR
64_006_scaffold_175_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19870..21891)
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
ATP-dependent DNA helicase rep n=7 Tax=Citrobacter RepID=C1MG35_9ENTR
ATP-dependent DNA helicase Rep
64_006_scaffold_175_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21976..22257
DNA (282bp) protein (94aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Peptidyl-prolyl cis-trans isomerase C n=10 Tax=Enterobacteriaceae RepID=C1MG34_9ENTR
peptidylprolyl isomerase
64_006_scaffold_175_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22377..22577)
DNA (201bp) protein (67aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1444039 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S1_C1.;"
Ketol-acid reductoisomerase n=1 Tax=Klebsiella oxytoca 10-5245 RepID=H3MDG0_KLEOX
Displaying 20 items

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