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64_006_scaffold_195

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_195_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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215..919
DNA (705bp) protein (235aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1ME72_9ENTR
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:KEL79697.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
GntR family transcriptional regulator
64_006_scaffold_195_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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921..2348
DNA (1428bp) protein (476aa)
Drug:H+ antiporter-2 family drug resistance MFS transporter n=3 Tax=Citrobacter RepID=J0M072_9ENTR
Major facilitator superfamily transporter {ECO:0000313|EMBL:ETX67682.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
major facilitator transporter
64_006_scaffold_195_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2314..3297)
DNA (984bp) protein (328aa)
Ribose operon repressor n=7 Tax=Citrobacter RepID=C1ME70_9ENTR
Ribose operon repressor {ECO:0000313|EMBL:ETX61723.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transcriptional regulator
64_006_scaffold_195_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3310..4239)
DNA (930bp) protein (310aa)
Ribokinase {ECO:0000313|EMBL:KJC11936.1}; EC=2.7.1.15 {ECO:0000313|EMBL:KJC11936.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ribokinase (EC:2.7.1.15)
Ribokinase n=6 Tax=Citrobacter RepID=J0LU01_9ENTR
64_006_scaffold_195_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4381..5271)
DNA (891bp) protein (297aa)
D-ribose-binding periplasmic protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BJ84_9ENTR
D-ribose transporter subunit RbsB
D-ribose transporter subunit RbsB {ECO:0000313|EMBL:AHY11235.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
64_006_scaffold_195_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5296..6261)
DNA (966bp) protein (322aa)
Ribose ABC transporter permease protein n=10 Tax=Enterobacteriaceae RepID=D4BJ83_9ENTR
rbsC; ribose ABC transporter permease
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KEL79702.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
64_006_scaffold_195_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6267..7772)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Ribose import ATP-binding protein RbsA n=9 Tax=Citrobacter RepID=C1ME66_9ENTR
sugar ABC transporter ATP-binding protein
64_006_scaffold_195_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7780..8199)
DNA (420bp) protein (140aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
D-ribose pyranase n=7 Tax=Enterobacteriaceae RepID=I6HFN4_SHIFL
D-ribose pyranase
64_006_scaffold_195_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8392..10260)
DNA (1869bp) protein (623aa)
Low affinity potassium transport system protein kup n=7 Tax=Citrobacter RepID=J0LU23_9ENTR
Low affinity potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Kup system potassium uptake protein {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
trkD; potassium transport protein Kup
64_006_scaffold_195_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10590..12086
DNA (1497bp) protein (499aa)
ATPase RavA {ECO:0000256|HAMAP-Rule:MF_01625}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01625};; Regulatory ATPase variant A {ECO:0000256|HAMAP-Rule:MF_01625}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Regulatory ATPase RavA n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DS08_CITFR
ATPase
64_006_scaffold_195_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12080..13531
DNA (1452bp) protein (484aa)
Protein ViaA n=4 Tax=Citrobacter RepID=K8QL73_CITFR
Protein ViaA {ECO:0000256|HAMAP-Rule:MF_01626, ECO:0000256|SAAS:SAAS00012203}; VWA domain protein interacting with AAA ATPase {ECO:0000256|HAMAP-Rule:MF_01626}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_006_scaffold_195_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13535..14527)
DNA (993bp) protein (331aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=2 Tax=Citrobacter freundii RepID=G9SBH5_CITFR
64_006_scaffold_195_13
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14679..15137
DNA (459bp) protein (153aa)
Regulatory protein AsnC n=13 Tax=Enterobacteriaceae RepID=C1ME60_9ENTR
transcriptional regulator
Transcriptional regulator AsnC {ECO:0000313|EMBL:GAL45970.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
64_006_scaffold_195_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15226..15675
DNA (450bp) protein (150aa)
Protein mioC n=6 Tax=Citrobacter RepID=J0LU37_9ENTR
Protein mioC {ECO:0000313|EMBL:ETX67670.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
FMN-binding protein MioC
64_006_scaffold_195_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16048..17937
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=5 Tax=Citrobacter RepID=J1FY73_9ENTR
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_006_scaffold_195_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18039..18662
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Ribosomal RNA small subunit methyltransferase G n=5 Tax=Citrobacter RepID=J0VLN6_9ENTR
gidB; 16S rRNA methyltransferase
64_006_scaffold_195_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19277..19657
DNA (381bp) protein (127aa)
ATP F0F1 synthase subunit I (EC:3.6.3.14)
Atp synthase i n=8 Tax=Citrobacter RepID=J0M0B2_9ENTR
ATP synthase I {ECO:0000313|EMBL:ETX67667.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_006_scaffold_195_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19665..20480
DNA (816bp) protein (272aa)
ATP synthase F0F1 subunit A (EC:3.6.3.14)
ATP synthase subunit a n=10 Tax=Citrobacter RepID=C1ME55_9ENTR
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
64_006_scaffold_195_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20527..20772
DNA (246bp) protein (82aa)
ATP F0F1 synthase subunit C (EC:3.6.3.14)
ATP synthase subunit C n=11 Tax=Citrobacter RepID=C1ME54_9ENTR
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
64_006_scaffold_195_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20818..21288
DNA (471bp) protein (157aa)
ATP F0F1 synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=8 Tax=Citrobacter RepID=D2THA2_CITRI
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
64_006_scaffold_195_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21303..21761
DNA (459bp) protein (153aa)
ATP F0F1 synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=6 Tax=Citrobacter RepID=J0VLP2_9ENTR
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Displaying 21 items

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