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64_006_scaffold_238

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_006_scaffold_238_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120..281)
DNA (162bp) protein (54aa)
Phage protein n=3 Tax=Citrobacter RepID=K8QT39_CITFR
Phage protein {ECO:0000313|EMBL:KJC06259.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
phage protein
64_006_scaffold_238_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320..418
DNA (99bp) protein (33aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX66137.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
64_006_scaffold_238_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

423..788
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QNJ4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:EIQ64095.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
64_006_scaffold_238_4
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

918..1178
DNA (261bp) protein (87aa)
CcdB antidote CcdA n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BJS2_CITFR
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFE05546.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
CcdA protein (antitoxin to CcdB)
64_006_scaffold_238_5
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1178..1495
DNA (318bp) protein (106aa)
Toxin-antitoxin system, toxin component, MazF family n=4 Tax=Enterobacteriaceae RepID=I6G6F1_SHIFL
Toxin-antitoxin system, toxin component, MazF family {ECO:0000313|EMBL:EIQ64093.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
CcdB toxin protein
64_006_scaffold_238_6
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1529..2341)
DNA (813bp) protein (271aa)
Shikimate 5-dehydrogenase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DS47_CITFR
Putative shikimate dehydrogenase {ECO:0000313|EMBL:GAL46980.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
shikimate 5-dehydrogenase
64_006_scaffold_238_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2343..3566)
DNA (1224bp) protein (408aa)
sorE; putative L-sorbose 1-phosphate reductase (EC:1.1.1.-)
Putative L-sorbose 1-phosphate dehydrogenase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QT35_CITFR
L-sorbose 1-phosphate reductase {ECO:0000313|EMBL:KJC02502.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_006_scaffold_238_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3635..4459)
DNA (825bp) protein (275aa)
PTS system, mannose/fructose/sorbose family, IID component n=7 Tax=Citrobacter RepID=C1MFE0_9ENTR
PTS system, mannose/fructose/sorbose , IID component family protein {ECO:0000313|EMBL:KEL78320.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
PTS system, mannose/fructose/sorbose family, IID component
64_006_scaffold_238_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4471..5268)
DNA (798bp) protein (266aa)
PTS system mannose-specific transporter subunit IIC n=3 Tax=Citrobacter RepID=K8QWM8_CITFR
PTS mannose transporter subunit IIC {ECO:0000313|EMBL:KJC06264.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
PTS system L-sorbose-specific IIC component, Man family
64_006_scaffold_238_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5334..5828)
DNA (495bp) protein (165aa)
PTS system protein n=5 Tax=Citrobacter RepID=J0VKG7_9ENTR
Sorbose-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:ETX71687.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
PTS system L-sorbose-specific IIB component, Man family
64_006_scaffold_238_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5828..6235)
DNA (408bp) protein (136aa)
PTS system, mannose/fructose/sorbose family, IIA component n=5 Tax=Citrobacter RepID=J1FX12_9ENTR
PTS system sorbose-specific IIA component {ECO:0000313|EMBL:ETX66144.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
PTS system L-sorbose-specific IIA component, Man family
64_006_scaffold_238_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6245..7051)
DNA (807bp) protein (269aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=J0LT00_9ENTR
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KEL78316.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
64_006_scaffold_238_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7122..8075)
DNA (954bp) protein (318aa)
Transcriptional regulator protein n=2 Tax=Citrobacter RepID=M3CJ04_CITFR
Sorbitol operon regulator {ECO:0000313|EMBL:ETX71690.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator with sigma factor-related N-terminal domain
64_006_scaffold_238_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8545..9420
DNA (876bp) protein (292aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
Pseudouridine synthase n=2 Tax=Citrobacter RepID=C1MFE6_9ENTR
23S rRNA pseudouridylate synthase
64_006_scaffold_238_15
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9417..9689)
DNA (273bp) protein (91aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=C1MFE7_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAL46971.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
64_006_scaffold_238_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9882..10238
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V7E5_9ENTR
Phage-related protein {ECO:0000313|EMBL:CDL36654.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
64_006_scaffold_238_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10235..10573
DNA (339bp) protein (113aa)
XRE family transcriptional regulator n=3 Tax=Citrobacter RepID=K8QT29_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX71694.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
putative conserved small protein
64_006_scaffold_238_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10594..12180)
DNA (1587bp) protein (529aa)
Sigma-54 dependent transcriptional regulator RtcR n=3 Tax=Citrobacter RepID=J0LSZ6_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC02491.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulatory protein RtcR
64_006_scaffold_238_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12630..13757
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8V6J8_9ENTR
SPFH domain / Band 7 family protein {ECO:0000313|EMBL:KEL78310.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
stomatin/prohibitin-family membrane protease subunit
64_006_scaffold_238_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13763..14548
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V5V0_9ENTR
Putative nucleotidyltransferase family protein {ECO:0000313|EMBL:KEL78309.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
nucleotidyltransferase
64_006_scaffold_238_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14591..15940)
DNA (1350bp) protein (450aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=4 Tax=Citrobacter RepID=J0VKF9_9ENTR
64_006_scaffold_238_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16255..17355
DNA (1101bp) protein (367aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Glucose-6-phosphate isomerase n=7 Tax=Citrobacter RepID=J1FX02_9ENTR
64_006_scaffold_238_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17373..17831
DNA (459bp) protein (153aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=7 Tax=Citrobacter RepID=J1FX02_9ENTR
64_006_scaffold_238_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18251..18493
DNA (243bp) protein (81aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=J0LSZ2_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY11411.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
64_006_scaffold_238_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18613..19251
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J1FWT0_9ENTR
Lipoprotein {ECO:0000313|EMBL:ETX71701.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_006_scaffold_238_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19248..19985
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D2T7_CITFR
Capsule biosynthesis GfcC family protein {ECO:0000313|EMBL:KEL78304.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_006_scaffold_238_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19985..22081
DNA (2097bp) protein (699aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QM11_CITFR
Membrane protein {ECO:0000313|EMBL:KJC06284.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
64_006_scaffold_238_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22179..22634)
DNA (456bp) protein (152aa)
Acetyltransferase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DR25_CITFR
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase {ECO:0000313|EMBL:KJC02482.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
64_006_scaffold_238_29
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22645..23154)
DNA (510bp) protein (170aa)
GCN5-like N-acetyltransferase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CJ18_CITFR
Putative acetyltransferase {ECO:0000313|EMBL:GAL46962.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
alanine acetyltransferase
64_006_scaffold_238_30
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23295..23705
DNA (411bp) protein (137aa)
Protein PsiE homolog n=12 Tax=Enterobacteriaceae RepID=C1MFG0_9ENTR
phosphate-starvation-inducible protein PsiE
Protein PsiE homolog {ECO:0000256|HAMAP-Rule:MF_01048}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
Displaying items 1-30 of 37 in total

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