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64_008_scaffold_3

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Displaying items 1-30 of 401 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_3_1
unknown

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comp(1..87)
DNA (87bp) protein (29aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 188 (4-2356988) RepID=T7QXN2_ECOLX
64_008_scaffold_3_2
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(152..745)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XCI9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFF75500.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
64_008_scaffold_3_3
unknown

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comp(768..1727)
DNA (960bp) protein (320aa)

This feature has no annotations

64_008_scaffold_3_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2141..2656
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3834-1 RepID=T9VPY3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV98755.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
64_008_scaffold_3_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2746..3147
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KDF18364.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
64_008_scaffold_3_6
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3909..4556)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5Z0U0_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KKB03523.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
hypothetical protein
64_008_scaffold_3_7
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4553..5614)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5Z392_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KKB03522.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
hypothetical protein
64_008_scaffold_3_8
unknown

Not on your lists

6592..6921
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DW98_CITFR
64_008_scaffold_3_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7028..8071
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DUY7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX64699.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
64_008_scaffold_3_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8180..9184)
DNA (1005bp) protein (335aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:KEL82140.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KEL82140.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Tryptophan-tRNA ligase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UTE5_9ENTR
tryptophanyl-tRNA synthetase
64_008_scaffold_3_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9386..11170)
DNA (1785bp) protein (595aa)
Diguanylate cyclase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWW1_CITFR
Diguanylate cyclase domain protein {ECO:0000313|EMBL:KEL82139.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
DeoR faimly transcriptional regulator
64_008_scaffold_3_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11291..12400)
DNA (1110bp) protein (370aa)
Protein YdiK n=2 Tax=Citrobacter RepID=K8R336_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL82138.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein
64_008_scaffold_3_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12566..13048)
DNA (483bp) protein (161aa)
Glutathione peroxidase n=2 Tax=Citrobacter RepID=M3DWA2_CITFR
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
peroxiredoxin
64_008_scaffold_3_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13133..15097)
DNA (1965bp) protein (655aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R749_CITFR
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDL41566.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase
64_008_scaffold_3_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15115..15609)
DNA (495bp) protein (165aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J1FXL4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDL41565.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
oxidoreductase
64_008_scaffold_3_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16019..16660)
DNA (642bp) protein (214aa)
Dna-binding protein n=6 Tax=Citrobacter RepID=J0LTR8_9ENTR
DNA-binding protein {ECO:0000313|EMBL:KJC12450.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA-binding protein
64_008_scaffold_3_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16788..17756)
DNA (969bp) protein (323aa)
serine dehydratase (EC:4.3.1.19)
Serine racemase n=4 Tax=Citrobacter RepID=J1FXT2_9ENTR
Serine racemase {ECO:0000313|EMBL:ETX70772.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_008_scaffold_3_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17784..18179)
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP n=6 Tax=Citrobacter RepID=J0VLA7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70773.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
endoribonuclease L-PSP
64_008_scaffold_3_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18402..18710)
DNA (309bp) protein (103aa)
Monooxygenase n=3 Tax=Citrobacter RepID=K8R745_CITFR
Putative monooxygenase ydhR {ECO:0000313|EMBL:KEL82131.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
monooxygenase
64_008_scaffold_3_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18747..19538)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CN38_CITFR
Isomerase {ECO:0000313|EMBL:KJC09332.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
isomerase
64_008_scaffold_3_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19668..20366
DNA (699bp) protein (233aa)
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:CDL41557.1}; EC=4.2.1.70 {ECO:0000313|EMBL:CDL41557.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Pseudouridine synthase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWV3_CITFR
pseudouridylate synthase
64_008_scaffold_3_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20406..21779)
DNA (1374bp) protein (458aa)
Multidrug resistance protein MdtK n=2 Tax=Citrobacter freundii RepID=K8R330_CITFR
Multidrug resistance protein MdtK {ECO:0000256|HAMAP-Rule:MF_00400, ECO:0000256|SAAS:SAAS00182200}; Multidrug-efflux transporter {ECO:0000256|HAMAP-Rule:MF_00400}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
multidrug transporter
64_008_scaffold_3_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21997..22644
DNA (648bp) protein (216aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain n=4 Tax=Citrobacter RepID=C1M461_9ENTR
Riboflavin synthase alpha chain {ECO:0000313|EMBL:ETX64715.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
64_008_scaffold_3_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22686..23834)
DNA (1149bp) protein (383aa)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CDL41553.1}; EC=2.1.1.79 {ECO:0000313|EMBL:CDL41553.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
cyclopropane fatty acyl phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase n=4 Tax=Citrobacter RepID=J0LZX8_9ENTR
64_008_scaffold_3_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24125..25330)
DNA (1206bp) protein (402aa)
Transporter n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BNR0_CITFR
Transporter {ECO:0000313|EMBL:KJC12441.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transporter
64_008_scaffold_3_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25444..26376
DNA (933bp) protein (311aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=C1M464_9ENTR
Hypothetical lysR-family transcriptional regulator YdhB {ECO:0000313|EMBL:CDL41551.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator
64_008_scaffold_3_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26373..27398)
DNA (1026bp) protein (342aa)
Pur regulon repressor n=6 Tax=Citrobacter RepID=J1FXU0_9ENTR
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:KEL82123.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcriptional regulator
64_008_scaffold_3_28
unknown

Not on your lists

27696..27785
DNA (90bp) protein (30aa)

This feature has no annotations

64_008_scaffold_3_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27961..29130
DNA (1170bp) protein (390aa)
Inner membrane transporter YdhP n=4 Tax=Citrobacter RepID=J0LZY4_9ENTR
MFS transporter {ECO:0000313|EMBL:KJC09340.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
MFS transporter
64_008_scaffold_3_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29170..29751)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Superoxide dismutase n=8 Tax=Citrobacter RepID=C1M468_9ENTR
superoxide dismutase
Displaying items 1-30 of 401 in total

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