ggKbase home page

64_008_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 83 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_56_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

293..1000
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V2W5_9ENTR
Molecular chaperone {ECO:0000313|EMBL:KJC04766.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pili assembly chaperone
64_008_scaffold_56_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1019..3481
DNA (2463bp) protein (821aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V6G5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04767.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
P pilus assembly protein, porin PapC
64_008_scaffold_56_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3472..4419
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8WKM1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04768.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fimbrial adhesin
64_008_scaffold_56_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4480..5316)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8WK12_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04769.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
AraC family transcriptional regulator
64_008_scaffold_56_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5666..6580)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QLF2_CITFR
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC04770.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LysR family transcriptional regulator
64_008_scaffold_56_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6685..7692
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UID9_9ENTR
NADPH:quinone reductase {ECO:0000313|EMBL:KJC04771.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
NADPH:quinone reductase
64_008_scaffold_56_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7694..7999
DNA (306bp) protein (102aa)
Antibiotic biosynthesis monooxygenase n=6 Tax=Citrobacter RepID=J0M0H9_9ENTR
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KJC04772.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
antibiotic biosynthesis monooxygenase
64_008_scaffold_56_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8118..9020
DNA (903bp) protein (301aa)
Transporter YicL n=4 Tax=Citrobacter RepID=J0VLV1_9ENTR
Carboxylate/amino acid/amine transporter {ECO:0000313|EMBL:ETX67597.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
64_008_scaffold_56_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9049..9867)
DNA (819bp) protein (273aa)
Lipoprotein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MDY3_9ENTR
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
64_008_scaffold_56_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9992..10930)
DNA (939bp) protein (313aa)
Isncy family n=3 Tax=Bacteria RepID=J0LUA0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC11841.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_56_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11141..11884)
DNA (744bp) protein (248aa)
4-hydroxy-2-oxoglutarate aldolase n=3 Tax=Citrobacter RepID=J1FY69_9ENTR
4-hydroxy-2-ketovalerate aldolase {ECO:0000313|EMBL:KJC11842.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
4-hydroxy-2-ketovalerate aldolase
64_008_scaffold_56_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11871..12980)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QUQ9_CITFR
Selenocysteine synthase {ECO:0000313|EMBL:KJC11843.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
selenocysteine synthase
64_008_scaffold_56_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12984..13841)
DNA (858bp) protein (286aa)
PTS system, mannose-specific IID component {ECO:0000313|EMBL:CDL40641.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDL40641.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
PTS system mannose/fructose/sorbose IID component family protein n=8 Tax=Enterobacteriaceae RepID=I6HFX1_SHIFL
PTS fructose transporter subunit IID
64_008_scaffold_56_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13841..14590)
DNA (750bp) protein (250aa)
PTS system sorbose-specific iic component family protein n=8 Tax=Enterobacteriaceae RepID=I6HFX0_SHIFL
PTS sorbose transporter subunit IIC
PTS sorbose transporter subunit IIC {ECO:0000313|EMBL:AHY11146.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
64_008_scaffold_56_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14616..15101)
DNA (486bp) protein (162aa)
Pts system protein n=6 Tax=Citrobacter RepID=J0LU95_9ENTR
PTS system sorbose subIIB component family protein {ECO:0000313|EMBL:KEL79789.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
PTS sugar transporter
64_008_scaffold_56_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15114..15539)
DNA (426bp) protein (142aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QNN8_CITFR
PTS system fructose IIA component family protein {ECO:0000313|EMBL:KEL79788.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
PTS fructose transporter subunit IIA
64_008_scaffold_56_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15751..18549)
DNA (2799bp) protein (933aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QUQ7_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC11848.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
64_008_scaffold_56_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18640..19056)
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=J0VLU4_9ENTR
Blasticidin S-acetyltransferase {ECO:0000313|EMBL:KJC11849.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
blasticidin S-acetyltransferase
64_008_scaffold_56_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19187..19480
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=R8UJA4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL79785.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_008_scaffold_56_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19575..20957
DNA (1383bp) protein (461aa)
Glycosyl hydrolase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QLE0_CITFR
Glycosyl hydrolase 1 family protein {ECO:0000313|EMBL:KEL79784.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
6-phospho-beta-glucosidase
64_008_scaffold_56_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21004..22197)
DNA (1194bp) protein (398aa)
Purine ribonucleoside efflux pump NepI n=2 Tax=Citrobacter RepID=K8QNN5_CITFR
Purine ribonucleoside efflux pump NepI {ECO:0000256|HAMAP-Rule:MF_01189}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nepI; ribonucleoside transporter
64_008_scaffold_56_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22316..22615)
DNA (300bp) protein (100aa)
Transcriptional regulator n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DT92_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC04787.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
64_008_scaffold_56_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22694..22966)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QQ64_CITFR
Toxin RelE {ECO:0000313|EMBL:KJC11854.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
toxin RelE
64_008_scaffold_56_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23067..23519)
DNA (453bp) protein (151aa)
Inner membrane protein n=6 Tax=Citrobacter RepID=J1FYC6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL79780.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_008_scaffold_56_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23645..25036)
DNA (1392bp) protein (464aa)
Sugar phosphate antiporter n=8 Tax=Citrobacter RepID=J0LU85_9ENTR
Hexose phosphate transport protein {ECO:0000313|EMBL:KEL79779.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
uhpT; sugar phosphate antiporter
64_008_scaffold_56_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25179..26507)
DNA (1329bp) protein (443aa)
Regulatory protein uhpC n=5 Tax=Citrobacter RepID=J1FY60_9ENTR
Regulatory protein UhpC {ECO:0000313|EMBL:KJC11857.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
regulatory protein UhpC
64_008_scaffold_56_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26517..28019)
DNA (1503bp) protein (501aa)
histidine kinase (EC:2.7.13.3)
Sensory histidine kinase UhpB n=3 Tax=Citrobacter RepID=J0M0G2_9ENTR
Sensor protein uhpB {ECO:0000313|EMBL:ETX67616.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_008_scaffold_56_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28016..28609)
DNA (594bp) protein (198aa)
Transcriptional regulatory protein uhpA n=8 Tax=Citrobacter RepID=C1ME00_9ENTR
Transcriptional regulatory protein uhpA {ECO:0000313|EMBL:ETX61652.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
uhpA; Transcriptional regulatory protein UhpA
64_008_scaffold_56_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28763..29776)
DNA (1014bp) protein (338aa)
DeoX n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BKX9_CITFR
Deoxyribose mutarotase {ECO:0000313|EMBL:KJC11860.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
deoxyribose mutarotase
64_008_scaffold_56_30
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29788..31104)
DNA (1317bp) protein (439aa)
Permease n=6 Tax=Citrobacter RepID=J0LU82_9ENTR
Sugar:proton symporter {ECO:0000313|EMBL:KKC61705.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
sugar:proton symporter
Displaying items 1-30 of 83 in total

View Taxonomy