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64_008_scaffold_133

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_133_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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342..1640
DNA (1299bp) protein (433aa)
Alpha-ketoglutarate transporter n=3 Tax=Citrobacter RepID=J1G839_9ENTR
Alpha-ketoglutarate transporter {ECO:0000313|EMBL:KJC04238.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
alpha-ketoglutarate transporter
64_008_scaffold_133_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1637..1960)
DNA (324bp) protein (108aa)
Lipoprotein n=3 Tax=Citrobacter RepID=R8UUU2_9ENTR
Lipoprotein {ECO:0000313|EMBL:KJC04242.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lipoprotein
64_008_scaffold_133_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2005..3360)
DNA (1356bp) protein (452aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000850}; EC=2.7.8.8 {ECO:0000256|PIRNR:PIRNR000850};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pssA; phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase n=5 Tax=Citrobacter RepID=K8R2B7_CITFR
64_008_scaffold_133_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3475..6135)
DNA (2661bp) protein (887aa)
Binding domain acetyltransferase domain protein n=4 Tax=Citrobacter RepID=J1G7U3_9ENTR
Protein acetyltransferase {ECO:0000313|EMBL:KJC04236.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
protein acetyltransferase
64_008_scaffold_133_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6172..6870)
DNA (699bp) protein (233aa)
DTW domain-containing protein yfiP n=4 Tax=Citrobacter RepID=C1M8J6_9ENTR
DTW domain-containing protein YfiP {ECO:0000313|EMBL:KJC04235.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_133_6
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6940..7359)
DNA (420bp) protein (140aa)
Thioredoxin n=10 Tax=Enterobacteriaceae RepID=D4B6H2_9ENTR
thioredoxin 2
Thioredoxin {ECO:0000313|EMBL:EIQ79923.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
64_008_scaffold_133_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7567..8646
DNA (1080bp) protein (360aa)
Rna methyltransferase n=5 Tax=Citrobacter RepID=J0VWQ7_9ENTR
Methyltransferase {ECO:0000313|EMBL:KJC04233.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
methyltransferase
64_008_scaffold_133_8
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8680..9369)
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=5 Tax=Citrobacter RepID=J0MAV0_9ENTR
64_008_scaffold_133_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9687..10070
DNA (384bp) protein (128aa)
Autonomous glycyl radical cofactor n=9 Tax=Citrobacter RepID=C1M8J2_9ENTR
Autonomous glycyl radical cofactor {ECO:0000256|HAMAP-Rule:MF_00806, ECO:0000256|SAAS:SAAS00028662}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
autonomous glycyl radical cofactor GrcA
64_008_scaffold_133_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10150..10737)
DNA (588bp) protein (196aa)
Cysteine/O-acetylserine exporter n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3B9Q5_CITFR
Cysteine/O-acetylserine efflux protein {ECO:0000313|EMBL:ETX69911.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
amino acid transporter
64_008_scaffold_133_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10795..11736
DNA (942bp) protein (314aa)
LysR family transcriptional regulator n=3 Tax=Citrobacter RepID=J1G847_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:ETX69910.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
LysR family transcriptional regulator
64_008_scaffold_133_12
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11754..13082)
DNA (1329bp) protein (443aa)
ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
ATP-dependent RNA helicase SrmB n=5 Tax=Enterobacteriaceae RepID=I6HGN7_SHIFL
ATP-dependent RNA helicase SrmB
64_008_scaffold_133_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13213..13950
DNA (738bp) protein (246aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DFP5_CITFR
tRNA (adenine-N6)-methyltransferase
64_008_scaffold_133_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13935..15557)
DNA (1623bp) protein (541aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=7 Tax=Citrobacter RepID=C1M8I7_9ENTR
64_008_scaffold_133_15
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15982..16557
DNA (576bp) protein (192aa)
RNA polymerase sigma factor n=12 Tax=Citrobacter RepID=D4B6I4_9ENTR
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
64_008_scaffold_133_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16523..17239
DNA (717bp) protein (239aa)
Sigma-E factor negative regulatory protein n=6 Tax=Citrobacter RepID=J1G852_9ENTR
Sigma-E factor negative regulatory protein {ECO:0000313|EMBL:KDF13744.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
rseA; anti-RNA polymerase sigma factor SigE
64_008_scaffold_133_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17239..18195
DNA (957bp) protein (319aa)
Anti-sigma E factor n=3 Tax=Citrobacter RepID=M3DGG3_CITFR
Sigma-E factor regulatory protein rseB {ECO:0000313|EMBL:KEL78733.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
rseB; anti-sigma E factor
64_008_scaffold_133_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18192..18656
DNA (465bp) protein (155aa)
Sigma-E factor regulatory protein rseC n=6 Tax=Citrobacter RepID=C1M8I3_9ENTR
Sigma-E factor regulatory protein rseC {ECO:0000313|EMBL:ETX62720.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
SoxR reducing system protein RseC
64_008_scaffold_133_19
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18927..20726
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
Elongation factor 4 n=10 Tax=Citrobacter RepID=C1M8I2_9ENTR
elongation factor 4
64_008_scaffold_133_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20742..21716
DNA (975bp) protein (325aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Signal peptidase I n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1FC74_CITFR
signal peptidase I
64_008_scaffold_133_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21986..22666
DNA (681bp) protein (227aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
Ribonuclease 3 n=11 Tax=Enterobacteriaceae RepID=C1M8I0_9ENTR
64_008_scaffold_133_22
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22663..23568
DNA (906bp) protein (302aa)
GTPase Era n=10 Tax=Citrobacter RepID=C1M8H9_9ENTR
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
GTP-binding protein Era
64_008_scaffold_133_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23596..24324
DNA (729bp) protein (243aa)
DNA repair protein RecO n=3 Tax=Citrobacter RepID=J0MAW1_9ENTR
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
recO; DNA repair protein RecO
64_008_scaffold_133_24
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24336..25067
DNA (732bp) protein (244aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
Pyridoxine 5'-phosphate synthase n=3 Tax=Citrobacter freundii complex RepID=D4B6J2_9ENTR
pyridoxine 5'-phosphate synthase
64_008_scaffold_133_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25067..25447
DNA (381bp) protein (127aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00102137}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00102157};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=7 Tax=Citrobacter RepID=C1M8H6_9ENTR
64_008_scaffold_133_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25477..25737)
DNA (261bp) protein (87aa)
Uncharacterized protein n=11 Tax=Enterobacteriaceae RepID=C1M8H5_9ENTR
4Fe-4S cluster-containing protein {ECO:0000313|EMBL:ETX69895.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_008_scaffold_133_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25793..26641)
DNA (849bp) protein (283aa)
Transcriptional family protein n=5 Tax=Citrobacter RepID=J0VWS5_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:ETX69894.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
64_008_scaffold_133_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26759..27652
DNA (894bp) protein (298aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Citrobacter sp. KTE151 RepID=R8X0Y4_9ENTR
murQ; N-acetylmuramic acid-6-phosphate etherase
64_008_scaffold_133_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27662..29026
DNA (1365bp) protein (455aa)
N-acetylmuramic acid-specific PTS system EIIBC component n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYN1_CITFR
PTS sugar transporter subunit IIC {ECO:0000313|EMBL:KJC07044.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
PTS sugar transporter subunit IIC
64_008_scaffold_133_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29030..29665
DNA (636bp) protein (212aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=K8QSF7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC07045.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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