ggKbase home page

64_008_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 99 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_164_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

416..1030
DNA (615bp) protein (205aa)
Putative resolvase n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6S3S7_ENTCL
Serine recombinase {ECO:0000313|EMBL:AKE59189.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
putative resolvase
64_008_scaffold_164_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1228..1968)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1FJW3_CITFR
Uncharacterized protein {ECO:0000313|EMBL:AKE59190.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
64_008_scaffold_164_3
Enterobacter sp. 42324, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2629..3090)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6SH06_ENTCL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJM27238.1}; TaxID=1619249 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 42324.;"
64_008_scaffold_164_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3777..4376
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Enterobacter cloacae complex RepID=U7CSX8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:AKE59191.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
64_008_scaffold_164_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4379..4657)
DNA (279bp) protein (93aa)
Uncharacterized protein n=28 Tax=Enterobacteriaceae RepID=G0GM74_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:ETX69557.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Na+/H+ antiporter nhaC
64_008_scaffold_164_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4890..5981
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae BWH 28 RepID=V3JU59_KLEPN
Membrane protein {ECO:0000313|EMBL:AKE59194.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
membrane-anchored nucleotide-binding enzyme
64_008_scaffold_164_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6258..6830
DNA (573bp) protein (191aa)
Elongation factor P-like protein n=8 Tax=Citrobacter RepID=C1M6K6_9ENTR
Elongation factor P-like protein {ECO:0000256|HAMAP-Rule:MF_00646, ECO:0000256|SAAS:SAAS00055120}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
yeiP; Elongation factor P-like protein.
64_008_scaffold_164_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7494..8126)
DNA (633bp) protein (211aa)
Chaperone protein TorD n=3 Tax=Citrobacter RepID=J1FZ86_9ENTR
Chaperone protein TorD {ECO:0000256|HAMAP-Rule:MF_01150, ECO:0000256|SAAS:SAAS00014573}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
molecular chaperone TorD
64_008_scaffold_164_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8116..10614)
DNA (2499bp) protein (833aa)
Molybdopterin guanine dinucleotide-containing S/N-oxide reductase n=3 Tax=Citrobacter RepID=J0LV41_9ENTR
Trimethylamine-N-oxide reductase TorA {ECO:0000313|EMBL:ETX69561.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
trimethylamine N-oxide reductase I catalytic subunit
64_008_scaffold_164_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10624..11757)
DNA (1134bp) protein (378aa)
NapC/NirT cytochrome c domain-containing protein n=3 Tax=Citrobacter RepID=J1FZ24_9ENTR
Trimethylamine-N-oxide reductase c-type cytochrome TorC {ECO:0000313|EMBL:ETX69562.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
trimethylamine N-oxide reductase cytochrome c-type subunit
64_008_scaffold_164_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11922..13394
DNA (1473bp) protein (491aa)
GntR family transcriptional regulator n=2 Tax=Citrobacter RepID=M3CHQ0_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC09865.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
64_008_scaffold_164_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13440..14630)
DNA (1191bp) protein (397aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DPS6_CITFR
64_008_scaffold_164_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14833..16299
DNA (1467bp) protein (489aa)
Dehydrogenase, NAD-dependent n=1 Tax=Citrobacter sp. KTE30 RepID=R8UST1_9ENTR
D-mannonate oxidoreductase {ECO:0000313|EMBL:KJC10682.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
D-mannonate oxidoreductase
64_008_scaffold_164_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16419..17405
DNA (987bp) protein (329aa)
Cobalamin synthesis protein p47k family protein n=3 Tax=Citrobacter RepID=J0LV37_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC10683.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_164_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17440..18153
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QR04_CITFR
Membrane protein {ECO:0000313|EMBL:KJC09869.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_164_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18567..19136
DNA (570bp) protein (190aa)
Outer membrane lipoprotein n=8 Tax=Citrobacter RepID=J0M1B4_9ENTR
spr; membrane protein
Lipoprotein spr {ECO:0000313|EMBL:ETX69568.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_008_scaffold_164_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19309..20868
DNA (1560bp) protein (520aa)
Phage resistance protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HIQ7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX69569.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
phage resistance protein
64_008_scaffold_164_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20969..22783
DNA (1815bp) protein (605aa)
Bacterial extracellular solute-binding family 5 n=3 Tax=Citrobacter RepID=J1FZ76_9ENTR
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:KEL80986.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
antibiotic ABC transporter substrate-binding protein
64_008_scaffold_164_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22784..23878
DNA (1095bp) protein (365aa)
Inner membrane ABC transporter permease yejB n=5 Tax=Citrobacter RepID=C1M6L8_9ENTR
microcin ABC transporter permease
Inner membrane ABC transporter permease yejB {ECO:0000313|EMBL:ETX63747.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
64_008_scaffold_164_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23878..24903
DNA (1026bp) protein (342aa)
ABC transporter n=5 Tax=Citrobacter RepID=J1FZ13_9ENTR
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) {ECO:0000313|EMBL:CDL36121.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
microcin ABC transporter permease
64_008_scaffold_164_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24905..26494
DNA (1590bp) protein (530aa)
Abc transporter atp-binding protein n=3 Tax=Citrobacter RepID=J0M1A9_9ENTR
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC09875.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
microcin ABC transporter ATP-binding protein
64_008_scaffold_164_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26498..26839)
DNA (342bp) protein (114aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M6M1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX69574.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_008_scaffold_164_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27176..28366)
DNA (1191bp) protein (397aa)
Bicyclomycin/multidrug efflux system n=6 Tax=Citrobacter RepID=J1FZ73_9ENTR
Bicyclomycin resistance protein {ECO:0000313|EMBL:KEL80981.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
bicyclomycin/multidrug efflux system
64_008_scaffold_164_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28382..29089)
DNA (708bp) protein (236aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Pseudouridine synthase n=5 Tax=Citrobacter RepID=J0LV29_9ENTR
16S rRNA pseudouridylate synthase
64_008_scaffold_164_25
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29192..31000
DNA (1809bp) protein (603aa)
Helicase C-terminal domain protein n=2 Tax=Enterobacteriaceae RepID=D4B7K7_9ENTR
Helicase C-terminal domain protein {ECO:0000313|EMBL:EFE10138.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
hypothetical protein
64_008_scaffold_164_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


31125..31409
DNA (285bp) protein (95aa)
50S ribosomal protein L25 n=8 Tax=Citrobacter RepID=C1M6M5_9ENTR
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01336, ECO:0000256|SAAS:SAAS00147491}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
50S ribosomal protein L25
64_008_scaffold_164_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31531..32538)
DNA (1008bp) protein (336aa)
Nucleoid-associated protein CSAG_02050 n=8 Tax=Citrobacter RepID=C1M6M6_9ENTR
Nucleoid-associated protein P835_02878 {ECO:0000256|HAMAP-Rule:MF_00730}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
nucleoid-associated protein NdpA
64_008_scaffold_164_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32673..32900
DNA (228bp) protein (76aa)
UPF0352 protein CSAG_02051 n=12 Tax=Enterobacteriaceae RepID=C1M6M7_9ENTR
hypothetical protein
UPF0352 protein WG82_12305 {ECO:0000256|HAMAP-Rule:MF_00816}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
64_008_scaffold_164_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32932..34692
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QVJ7_CITFR
Membrane protein {ECO:0000313|EMBL:KJC10697.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
64_008_scaffold_164_trna_1
unknown

Not on your lists

34767..34840
DNA (74bp)
transferRNA Pro
Displaying items 1-30 of 99 in total

View Taxonomy