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64_008_scaffold_221

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_221_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63..395
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QN07_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KDX36572.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
hypothetical protein
64_008_scaffold_221_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

587..997
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=I2Y2Z3_ECOLX
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:KDX36571.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
hemerythrin HHE cation binding domain-containing protein
64_008_scaffold_221_3
Enterobacteria phage mEp237, Lambdalikevirus, Caudovirales, Viruses

Not on your lists

comp(1083..1322)
DNA (240bp) protein (80aa)
DinI family protein n=6 Tax=root RepID=M9NYX3_BPPH8
Virulence protein MsgA {ECO:0000313|EMBL:AFM76180.1}; TaxID=1147151 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus; unclassified Lambda-like viruses.;" source="Enterobacteria phage mEp237.;"
virulence protein msgA
64_008_scaffold_221_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1676..2242)
DNA (567bp) protein (189aa)
Hydrolase n=3 Tax=Citrobacter RepID=K8QLJ0_CITFR
Isochorismatase yecD {ECO:0000313|EMBL:ETX69237.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hydrolase
64_008_scaffold_221_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2531..4303
DNA (1773bp) protein (591aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:KEL81544.1}; EC=6.1.1.- {ECO:0000313|EMBL:KEL81544.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Aspartate--tRNA ligase n=5 Tax=Citrobacter RepID=J1FYA1_9ENTR
aspartyl-tRNA synthetase
64_008_scaffold_221_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4305..4748
DNA (444bp) protein (148aa)
Dihydroneopterin triphosphate pyrophosphatase n=2 Tax=Citrobacter RepID=M3DUV1_CITFR
Dihydroneopterin triphosphate pyrophosphatase {ECO:0000313|EMBL:KJC10297.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nudB; dihydroneopterin triphosphate pyrophosphatase
64_008_scaffold_221_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4777..5520
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein WYG_3638 n=6 Tax=Citrobacter RepID=J0VLY1_9ENTR
Probable transcriptional regulatory protein TN42_08630 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_221_8
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5555..6076
DNA (522bp) protein (174aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
Crossover junction endodeoxyribonuclease RuvC n=12 Tax=Enterobacteriaceae RepID=C1M5N7_9ENTR
64_008_scaffold_221_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6157..6768
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CLM7_CITFR
ruvA; Holliday junction DNA helicase RuvA
64_008_scaffold_221_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6777..7787
DNA (1011bp) protein (337aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Holliday junction ATP-dependent DNA helicase RuvB n=7 Tax=Citrobacter RepID=C1M5N5_9ENTR
ATP-dependent DNA helicase RuvB
64_008_scaffold_221_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7866..8651)
DNA (786bp) protein (262aa)
High-affinity zinc uptake system membrane protein znuB n=5 Tax=Citrobacter RepID=C1M5N4_9ENTR
High-affinity zinc uptake system membrane protein znuB {ECO:0000313|EMBL:KEL81550.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
znuB; zinc transporter
64_008_scaffold_221_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8648..9403)
DNA (756bp) protein (252aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
Zinc import ATP-binding protein ZnuC n=7 Tax=Citrobacter RepID=C1M5N3_9ENTR
znuC; zinc ABC transporter ATPase
64_008_scaffold_221_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9467..10426
DNA (960bp) protein (320aa)
High-affinity zinc uptake system protein znuA n=2 Tax=Citrobacter RepID=C1M5N2_9ENTR
High-affinity zinc uptake system protein znuA {ECO:0000313|EMBL:ETX63386.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
znuA; zinc ABC transporter substrate-binding protein
64_008_scaffold_221_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10442..11761
DNA (1320bp) protein (440aa)
Opacity-associated protein a family n=5 Tax=Citrobacter RepID=J0LUC4_9ENTR
LysM domain protein {ECO:0000313|EMBL:KEL81553.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
peptidase
64_008_scaffold_221_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..12852
DNA (972bp) protein (324aa)
Lipid A biosynthesis myristoyltransferase {ECO:0000256|HAMAP-Rule:MF_01944}; EC=2.3.1.243 {ECO:0000256|HAMAP-Rule:MF_01944};; Kdo(2)-lauroyl-lipid IV(A) myristoyltransferase {ECO:0000256|HAMAP-Rule:MF_01944}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSG7_CITFR
lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
64_008_scaffold_221_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12896..14338)
DNA (1443bp) protein (481aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=8 Tax=Citrobacter RepID=C1M5M9_9ENTR
64_008_scaffold_221_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14457..15350)
DNA (894bp) protein (298aa)
HTH-type transcriptional regulator hexR n=6 Tax=Citrobacter RepID=J0VLX2_9ENTR
HTH-type transcriptional regulator hexR {ECO:0000313|EMBL:ETX69224.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
64_008_scaffold_221_18
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15694..17169
DNA (1476bp) protein (492aa)
glucose-6-phosphate dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Glucose-6-phosphate 1-dehydrogenase n=8 Tax=Citrobacter RepID=J1FYF8_9ENTR
64_008_scaffold_221_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17403..19214
DNA (1812bp) protein (604aa)
phosphogluconate dehydratase (EC:4.2.1.12)
Phosphogluconate dehydratase n=3 Tax=Citrobacter RepID=K8QLH6_CITFR
Phosphogluconate dehydratase {ECO:0000313|EMBL:ETX69222.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_008_scaffold_221_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19249..19890
DNA (642bp) protein (214aa)
4-hydroxy-2-oxoglutarate aldolase @ 2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:CDL39855.1}; EC=4.1.2.14 {ECO:0000313|EMBL:CDL39855.1};; EC=4.1.3.16 {ECO:0000313|EMBL:CDL39855.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
keto-deoxy-phosphogluconate aldolase (EC:4.1.2.14 4.1.3.16)
KHG/KDPG aldolase n=8 Tax=Citrobacter RepID=C1M5M5_9ENTR
64_008_scaffold_221_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19957..21135)
DNA (1179bp) protein (393aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Phosphoribosylglycinamide formyltransferase 2; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Phosphoribosylglycinamide formyltransferase 2 n=4 Tax=Citrobacter RepID=J0M0J2_9ENTR
phosphoribosylglycinamide formyltransferase
64_008_scaffold_221_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21267..21557
DNA (291bp) protein (97aa)
Dna damage-inducible protein n=5 Tax=Citrobacter RepID=J0VLW7_9ENTR
Damage-inducible protein YebG {ECO:0000313|EMBL:KJC10284.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
damage-inducible protein YebG
64_008_scaffold_221_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21679..22032
DNA (354bp) protein (118aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=M3BMC7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC12125.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_221_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22127..22786
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CLL1_CITFR
Membrane protein {ECO:0000313|EMBL:KJC12124.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
64_008_scaffold_221_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22849..24927
DNA (2079bp) protein (693aa)
Protease 2 {ECO:0000313|EMBL:KJC12123.1}; EC=3.4.21.83 {ECO:0000313|EMBL:KJC12123.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
protease 2 (EC:3.4.21.83)
Protease 2 n=3 Tax=Citrobacter RepID=J1FY83_9ENTR
64_008_scaffold_221_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24918..25580)
DNA (663bp) protein (221aa)
Exodeoxyribonuclease X n=2 Tax=Citrobacter RepID=K8QMY0_CITFR
Exodeoxyribonuclease X {ECO:0000313|EMBL:KJC10280.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
exodeoxyribonuclease X
64_008_scaffold_221_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25604..26260)
DNA (657bp) protein (219aa)
Carbon-nitrogen family hydrolase n=3 Tax=Citrobacter RepID=K8QW14_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX69214.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
carbon-nitrogen hydrolase
64_008_scaffold_221_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26367..26597)
DNA (231bp) protein (77aa)
DNA polymerase III subunit theta n=9 Tax=Citrobacter RepID=C1M5L7_9ENTR
DNA polymerase III subunit theta {ECO:0000313|EMBL:KKC61189.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
DNA polymerase III subunit theta
64_008_scaffold_221_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26741..27115
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DUS1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC10277.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_221_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27119..27991
DNA (873bp) protein (291aa)
Inner membrane protein YebZ n=4 Tax=Citrobacter RepID=J1G247_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC12118.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
Displaying items 1-30 of 60 in total

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