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64_008_scaffold_324

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_324_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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67..342
DNA (276bp) protein (92aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
DNA-directed RNA polymerase subunit omega n=2211 Tax=Bacteria RepID=RPOZ_CITK8
64_008_scaffold_324_2
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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531..2426
DNA (1896bp) protein (632aa)
Bifunctional (P)ppGpp synthase/hydrolase SpoT {ECO:0000313|EMBL:EIQ78863.1}; EC=3.1.7.2 {ECO:0000313|EMBL:EIQ78863.1};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Bifunctional (P)ppGpp synthase/hydrolase SpoT n=1 Tax=Shigella flexneri 1235-66 RepID=I6HDM1_SHIFL
(p)ppGpp synthetase
64_008_scaffold_324_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2437..3126
DNA (690bp) protein (230aa)
tRNA guanosine-2'-O-methyltransferase {ECO:0000313|EMBL:KJC04740.1}; EC=2.1.1.34 {ECO:0000313|EMBL:KJC04740.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tRNA guanosine-2'-O-methyltransferase (EC:2.1.1.34)
tRNA guanosine-2'-O-methyltransferase n=2 Tax=Citrobacter freundii RepID=K8R3K8_CITFR
64_008_scaffold_324_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3132..5213
DNA (2082bp) protein (694aa)
ATP-dependent DNA helicase RecG n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QRK5_CITFR
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KJC11815.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ATP-dependent DNA helicase RecG
64_008_scaffold_324_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5256..6461)
DNA (1206bp) protein (402aa)
Sodium/glutamate symporter carrier protein n=8 Tax=Citrobacter RepID=C1MDV5_9ENTR
Sodium:glutamate symporter {ECO:0000313|EMBL:KJC04742.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sodium:glutamate symporter
64_008_scaffold_324_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6687..8078
DNA (1392bp) protein (464aa)
Xanthine permease XanP n=9 Tax=Citrobacter RepID=C1MDV6_9ENTR
Xanthine permease XanP {ECO:0000313|EMBL:KDF08161.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
xanthine permease XanP
64_008_scaffold_324_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8200..9909
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D424_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC11818.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_324_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9952..10629)
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UPQ5_9ENTR
Sugar isomerase {ECO:0000313|EMBL:KJC04745.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sugar isomerase
64_008_scaffold_324_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10679..11539)
DNA (861bp) protein (287aa)
Ketose-bisphosphate aldolase n=5 Tax=Citrobacter RepID=C1MDV9_9ENTR
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ETX67578.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_008_scaffold_324_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11620..12471)
DNA (852bp) protein (284aa)
Sugar aldolase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DSB2_CITFR
Aldolase {ECO:0000313|EMBL:KJC04747.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
aldolase
64_008_scaffold_324_11
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12483..13574)
DNA (1092bp) protein (364aa)
PTS system, Fru family, IIC component n=6 Tax=Citrobacter RepID=J1G3Q0_9ENTR
PTS system fructose-specific IIC component {ECO:0000313|EMBL:EOQ45225.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
PTS fructose transporter subunit IIC
64_008_scaffold_324_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13601..13921)
DNA (321bp) protein (107aa)
Fructose-like phosphotransferase enzyme IIB component 2 {ECO:0000313|EMBL:KEL79829.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KEL79829.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Fructose-like phosphotransferase enzyme IIB component 2 n=3 Tax=Enterobacteriaceae RepID=I6HDL0_SHIFL
PTS fructose transporter subunit IIB
64_008_scaffold_324_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13941..14411)
DNA (471bp) protein (157aa)
PTS system, fructose subfamily, IIA component domain protein {ECO:0000313|EMBL:KEL79828.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KEL79828.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
PTS system, fructose subfamily, IIA component n=1 Tax=Citrobacter sp. 30_2 RepID=C1MDW3_9ENTR
FrvA
64_008_scaffold_324_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14438..15991)
DNA (1554bp) protein (518aa)
Transcriptional antiterminator n=2 Tax=Citrobacter RepID=R8UKV0_9ENTR
PRD domain protein {ECO:0000313|EMBL:KEL79827.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
LicR
64_008_scaffold_324_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16314..18632)
DNA (2319bp) protein (773aa)
Alpha-xylosidase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UKP2_9ENTR
Alpha-glucosidase {ECO:0000313|EMBL:KJC11826.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
alpha-glucosidase
64_008_scaffold_324_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18643..20025)
DNA (1383bp) protein (461aa)
Transporter n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DTD3_CITFR
Transporter {ECO:0000313|EMBL:KJC11827.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transporter
64_008_scaffold_324_17
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20485..22284
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6CDB9_DICDC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF70880.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
64_008_scaffold_324_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22299..22490)
DNA (192bp) protein (64aa)
Repressor n=1 Tax=Enterobacter sp. R4-368 RepID=R9VSC7_9ENTR
HicB family protein {ECO:0000313|EMBL:KEL79810.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
repressor
64_008_scaffold_324_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22617..22907
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J0LY24_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC11830.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_008_scaffold_324_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23025..23201
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D3Z9_CITFR
Prevent-host-death protein {ECO:0000313|EMBL:KJC04759.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
antitoxin
64_008_scaffold_324_21
unknown

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comp(23292..23381)
DNA (90bp) protein (30aa)

This feature has no annotations

64_008_scaffold_324_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24096..26921)
DNA (2826bp) protein (942aa)
Autotransport protein MisL n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QLF6_CITFR
Autotransport protein MisL {ECO:0000313|EMBL:KJC11833.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
autotransport protein MisL
64_008_scaffold_324_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26996..27613)
DNA (618bp) protein (206aa)
Hth-type transcriptional regulator ykgk n=6 Tax=Citrobacter RepID=J0LY18_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC11834.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
64_008_scaffold_324_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28190..28960
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UK10_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC04870.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
64_008_scaffold_324_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28960..29424
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QQ78_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL79803.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_008_scaffold_324_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29767..31263
DNA (1497bp) protein (499aa)
Dipeptidase n=6 Tax=Enterobacteriaceae RepID=K8QYF0_CITFR
Peptidase C69 family protein {ECO:0000313|EMBL:KEL79801.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
peptidase
64_008_scaffold_324_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31338..31988)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8WK05_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04764.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
64_008_scaffold_324_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32471..32920
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V182_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04765.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Displaying 28 items

View Taxonomy