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64_008_scaffold_43

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Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_43_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53..721
DNA (669bp) protein (223aa)
Uncharacterized protein n=100 Tax=Clostridium difficile RepID=Q181Y0_CLOD6
conserved hypothetical protein
MORN repeat family protein {ECO:0000313|EMBL:EQG75196.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_43_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

880..1386
DNA (507bp) protein (169aa)
Exonuclease, DNA polymerase III, epsilon subunit family domain protein {ECO:0000313|EMBL:EQH98600.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EQH98600.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Exonuclease, DNA polymerase III, epsilon subunit family domain protein n=193 Tax=Clostridium difficile RepID=C9XLH5_CLODC
DNA polymerase III subunit epsilon
64_008_scaffold_43_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1514..2530
DNA (1017bp) protein (339aa)
Transglycosylase n=157 Tax=Clostridium difficile RepID=G6BZD6_CLODI
transglycosylase
Transglycosylase family protein {ECO:0000313|EMBL:EQH98599.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_008_scaffold_43_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2884..3588
DNA (705bp) protein (235aa)
B3/4 domain protein n=129 Tax=Clostridium difficile RepID=T3GFP3_CLODC
tRNA-binding protein
Putative tRNA-binding protein {ECO:0000313|EMBL:CEJ99010.1}; Solo B3/4 domain-containing protein {ECO:0000313|EMBL:CKH30832.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_43_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3880..4362
DNA (483bp) protein (161aa)
Putative membrane protein n=103 Tax=Clostridium difficile RepID=T3GJP3_CLODC
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:EQE61197.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_43_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5003..5377
DNA (375bp) protein (125aa)
Penicillinase repressor family protein n=184 Tax=Clostridium difficile RepID=C9XLH1_CLODC
beta-lactamase repressor
Penicillinase repressor family protein {ECO:0000313|EMBL:EQG76096.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_43_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5382..6518
DNA (1137bp) protein (379aa)
Peptidase, M56 family n=3 Tax=Clostridium difficile RepID=G6BZD2_CLODI
putative beta-lactams signal-transducer
Putative beta-lactams signal-transducer {ECO:0000313|EMBL:CAJ69274.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_43_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6535..7137
DNA (603bp) protein (201aa)
Peptidoglycan-binding/hydrolysing protein {ECO:0000313|EMBL:CKH30683.1}; EC=3.4.17.14 {ECO:0000313|EMBL:CKH30683.1};; Putative peptidoglycan-binding/hydrolysingprotein {ECO:0000313|EMBL:CEJ99006.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Peptidoglycan binding domain protein n=111 Tax=Clostridium difficile RepID=G6BZD1_CLODI
putative peptidoglycan-binding/hydrolysingprotein
64_008_scaffold_43_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7230..8252)
DNA (1023bp) protein (341aa)
Alpha-hydroxy acid dehydrogenase,FMN-dependent n=97 Tax=Clostridium difficile RepID=Q181X1_CLOD6
alpha-hydroxy acid dehydrogenase
Alpha-hydroxy acid dehydrogenase,FMN-dependent {ECO:0000313|EMBL:CAJ69272.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_43_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8581..8763)
DNA (183bp) protein (61aa)
Uncharacterized protein n=184 Tax=Clostridium difficile RepID=T3GJ59_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE61460.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_43_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9076..9495
DNA (420bp) protein (140aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=C9XLG5_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQI81148.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_008_scaffold_43_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9626..11467
DNA (1842bp) protein (614aa)
Diguanylate cyclase domain protein n=160 Tax=Clostridium difficile RepID=G6BZC7_CLODI
putative diguanylate cyclase signaling protein
Putative diguanylate cyclase signaling protein {ECO:0000313|EMBL:CCL22715.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_43_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11551..13380
DNA (1830bp) protein (610aa)
Diguanylate cyclase domain protein n=25 Tax=Clostridium difficile RepID=T2TXS5_CLODI
putative diguanylate cyclase signaling protein
Putative diguanylate cyclase signaling protein {ECO:0000313|EMBL:CEJ99001.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_43_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13397..15388
DNA (1992bp) protein (664aa)
Sensory box protein n=116 Tax=Clostridium difficile RepID=T3GFU7_CLODC
Transcriptional regulator, sigma-54-dependent {ECO:0000313|EMBL:CAJ69268.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Transcriptional regulator, sigma-54-dependent
64_008_scaffold_43_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15650..16909
DNA (1260bp) protein (420aa)
Aminotransferase class I and II n=131 Tax=Clostridium difficile RepID=T3GJB3_CLODC
putative pyridoxal phosphate-dependenttransferase
Putative pyridoxal phosphate-dependent transferase {ECO:0000313|EMBL:CAJ69267.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_43_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16970..18757
DNA (1788bp) protein (596aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
iorA; Indole pyruvate ferredoxin/flavodoxinoxidoreductase (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=182 Tax=Clostridium difficile RepID=T3GEY3_CLODC
64_008_scaffold_43_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18759..19334
DNA (576bp) protein (192aa)
indolepyruvate oxidoreductase subunit beta (EC:1.2.7.8)
Indole pyruvate ferredoxin/flavodoxin oxidoreductase {ECO:0000313|EMBL:CCL30615.1}; EC=1.2.7.8 {ECO:0000313|EMBL:CCL30615.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Indole pyruvate ferredoxin/flavodoxin oxidoreductase n=214 Tax=Clostridium difficile RepID=Q181W6_CLOD6
64_008_scaffold_43_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19387..20457
DNA (1071bp) protein (357aa)
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Probable butyrate kinase n=174 Tax=Clostridium difficile RepID=C9XLF8_CLODC
64_008_scaffold_43_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20675..21376
DNA (702bp) protein (234aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=T3GJU7_CLODC
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EQH98578.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_008_scaffold_43_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21436..21942
DNA (507bp) protein (169aa)
NUDIX domain protein n=170 Tax=Clostridium difficile RepID=T3GJA8_CLODC
NUDIX family hydrolase
NUDIX domain protein {ECO:0000313|EMBL:EQE61469.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_43_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22117..23139
DNA (1023bp) protein (341aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=G6BCN1_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE61420.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_43_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23286..23594)
DNA (309bp) protein (103aa)
Uncharacterized protein n=216 Tax=Clostridium difficile RepID=C9XLF4_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30610.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_43_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23654..24082)
DNA (429bp) protein (143aa)
Uncharacterized protein n=153 Tax=Clostridium difficile RepID=C9XLF3_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ25191.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_43_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24305..25804)
DNA (1500bp) protein (500aa)
Carbon starvation protein CstA n=10 Tax=Clostridium difficile RepID=G6BCM8_CLODI
carbon starvation protein
Putative CstA-like carbon starvation protein {ECO:0000313|EMBL:CCL22701.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_43_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26180..27094
DNA (915bp) protein (305aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Quinolinate synthase A n=190 Tax=Clostridium difficile RepID=NADA_CLOD6 rbh
nadA; quinolinate synthetase
64_008_scaffold_43_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27107..28408
DNA (1302bp) protein (434aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=207 Tax=Clostridium difficile RepID=C9XLF0_CLODC
FAD binding domain protein {ECO:0000313|EMBL:EHJ25188.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_43_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28389..29225
DNA (837bp) protein (279aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=48 Tax=Clostridium difficile RepID=C9XLE9_CLODC
nadC; nicotinate-nucleotide pyrophosphorylase
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CBE05436.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_008_scaffold_43_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29481..29813
DNA (333bp) protein (111aa)
DsrE/DsrF-like family protein n=212 Tax=Clostridium difficile RepID=C9XLE8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30604.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_43_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29975..30160
DNA (186bp) protein (62aa)
Uncharacterized protein n=213 Tax=Clostridium difficile RepID=C9XLE7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE61424.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_43_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30187..31272
DNA (1086bp) protein (362aa)
ABC-type transport system, multidrug-family permease n=129 Tax=Clostridium difficile RepID=Q185N7_CLOD6
ABC-type transport system, multidrug-familypermease
ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CDT12738.1}; ABC-type transport system, multidrug-familypermease {ECO:0000313|EMBL:CEJ98984.1}; Permease {ECO:0000313|EMBL:CKH29978.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Displaying items 1-30 of 70 in total

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