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64_008_scaffold_69

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_69_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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413..1432
DNA (1020bp) protein (340aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Phenylalanine--tRNA ligase alpha subunit n=184 Tax=Clostridium difficile RepID=Q189P4_CLOD6
64_008_scaffold_69_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1449..3842
DNA (2394bp) protein (798aa)
pheT; Phenylalanyl-tRNA synthetase subunit beta(Phenylalanine--tRNA ligase beta chain) (PheRS) (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Phenylalanine--tRNA ligase beta subunit n=5 Tax=Clostridium difficile RepID=Q189P6_CLOD6
64_008_scaffold_69_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3867..4457
DNA (591bp) protein (197aa)
Cell division protein ZapA n=199 Tax=Clostridium difficile RepID=G6B7D3_CLODI
putative cell-division protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_69_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4806..5489
DNA (684bp) protein (228aa)
Uncharacterized protein n=150 Tax=Clostridium difficile RepID=G6BUA3_CLODI
hypothetical protein
Putative membrane protein, DUF1275 family {ECO:0000313|EMBL:CCL32794.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_69_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6058..8640
DNA (2583bp) protein (861aa)
Protease {ECO:0000313|EMBL:CKH62230.1}; EC=3.4.-.- {ECO:0000313|EMBL:CKH62230.1};; Putative peptidase, U32 family {ECO:0000313|EMBL:CEJ97248.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Peptidase U32 family protein n=2 Tax=Clostridium difficile RepID=T4B3A9_CLODI
U32 family peptidase
64_008_scaffold_69_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8744..9322
DNA (579bp) protein (193aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T3I6Y6_CLODC
putative metal-dependent phosphohydrolase
Putative metal-dependent phosphohydrolase {ECO:0000313|EMBL:CAJ67537.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_69_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9357..9833
DNA (477bp) protein (159aa)
8-oxo-dGTP diphosphatase {ECO:0000313|EMBL:CDS84503.1}; EC=3.6.1.55 {ECO:0000313|EMBL:CDS84503.1};; DNA repair protein {ECO:0000313|EMBL:CKH62136.1}; EC=3.6.1.55 {ECO:0000313|EMBL:CKH62136.1};; Putative hydrolase, NUDIX family {ECO:0000313|EMBL:CDS84046.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Mutator mutT protein n=189 Tax=Clostridium difficile RepID=T3I5R7_CLODC
NUDIX family hydrolase
64_008_scaffold_69_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10351..11172
DNA (822bp) protein (274aa)
4Fe-4S binding domain protein n=6 Tax=Clostridium difficile RepID=T3IAT0_CLODC
4fe-4s binding domain protein
4fe-4s binding domain protein {ECO:0000313|EMBL:CEJ97251.1}; Reductase {ECO:0000313|EMBL:CKH62072.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_69_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11395..13908
DNA (2514bp) protein (838aa)
Putative diguanylate kinase signaling protein {ECO:0000313|EMBL:CEJ97252.1}; Signaling protein {ECO:0000313|EMBL:CKH62024.1}; EC=2.7.7.65 {ECO:0000313|EMBL:CKH62024.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Diguanylate cyclase domain protein n=1 Tax=Clostridium difficile 70-100-2010 RepID=G6BUA8_CLODI
putative diguanylate kinase signaling protein
64_008_scaffold_69_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14112..15563)
DNA (1452bp) protein (484aa)
Xaa-His dipeptidase family protein {ECO:0000313|EMBL:EQG77865.1}; EC=3.4.13.20 {ECO:0000313|EMBL:EQG77865.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Peptidase D, aminoacyl-histidine dipeptidase n=143 Tax=Clostridium difficile RepID=Q189Q4_CLOD6
aminoacyl-histidine dipeptidase
64_008_scaffold_69_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15882..18260
DNA (2379bp) protein (793aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Endonuclease MutS2 n=7 Tax=Clostridium difficile RepID=MUTS2_CLOD6 rbh
mutS2; DNA mismatch repair protein
64_008_scaffold_69_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18328..18741
DNA (414bp) protein (138aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T3IBU7_CLODC
conserved hypothetical protein, DUF523 family
Uncharacterized protein {ECO:0000313|EMBL:CAJ67543.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_69_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19000..20700
DNA (1701bp) protein (567aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=152 Tax=Clostridium difficile RepID=SYR_CLOD6 rbh
64_008_scaffold_69_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20954..21877
DNA (924bp) protein (308aa)
Uncharacterized protein n=79 Tax=Clostridium difficile RepID=Q189Q6_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77635.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_69_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21882..22088)
DNA (207bp) protein (69aa)
Uncharacterized protein n=219 Tax=Clostridium difficile RepID=F3Y5Y4_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG78026.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_69_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22224..23978
DNA (1755bp) protein (585aa)
Radical SAM superfamily protein n=76 Tax=Clostridium difficile RepID=T2UDH4_CLODI
Adenosylcobamide-dependent radical SAM protein {ECO:0000313|EMBL:CKH61790.1}; Putative radical SAM domain-containing protein {ECO:0000313|EMBL:CEJ97259.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
radical SAM domain-containing protein
64_008_scaffold_69_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23996..25138
DNA (1143bp) protein (381aa)
Tetratricopeptide repeat family protein n=5 Tax=Clostridium difficile RepID=T3IA90_CLODC
tetratricopeptide repeat protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CAJ67547.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_69_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25471..26382
DNA (912bp) protein (304aa)
Phosphate acetyl/butaryl transferase family protein n=199 Tax=Clostridium difficile RepID=C9XLU2_CLODC
phosphate butyryltransferase
Phosphate acetyl/butaryl transferase family protein {ECO:0000313|EMBL:EQG77283.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_69_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26989..28908
DNA (1920bp) protein (640aa)
cooS; bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (EC:1.2.99.2)
Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH) {ECO:0000313|EMBL:CCL20837.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CCL20837.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Carbon-monoxide dehydrogenase, catalytic subunit n=101 Tax=Clostridium difficile RepID=T3I860_CLODC
64_008_scaffold_69_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29218..29997
DNA (780bp) protein (260aa)
Putative carbon monoxide dehydrogenase accessory protein CooC n=3 Tax=Clostridium difficile RepID=G6B7B2_CLODI
cooC; carbon monoxide dehydrogenase accessory protein
Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase, accessory protein {ECO:0000313|EMBL:CCK89505.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
64_008_scaffold_69_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30246..31922
DNA (1677bp) protein (559aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Formate--tetrahydrofolate ligase n=194 Tax=Clostridium difficile RepID=FTHS_CLOD6
fhs; formate--tetrahydrofolate ligase
64_008_scaffold_69_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32027..32659
DNA (633bp) protein (211aa)
fchA; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Methenyltetrahydrofolate cyclohydrolase n=178 Tax=Clostridium difficile RepID=T3IBE8_CLODC
Putative methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:EHJ31249.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_69_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32751..33623
DNA (873bp) protein (291aa)
Bifunctional protein FolD n=125 Tax=Clostridium difficile RepID=T2TPA8_CLODI
folD; FolD bifunctional protein
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_69_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33660..34334
DNA (675bp) protein (225aa)
Methylene-tetrahydrofolate reductase family protein n=191 Tax=Clostridium difficile RepID=C9XLU8_CLODC
hypothetical protein
Methylene-tetrahydrofolate reductase family protein {ECO:0000313|EMBL:EQE68739.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_69_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34370..35251
DNA (882bp) protein (294aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Methylenetetrahydrofolate reductase n=175 Tax=Clostridium difficile RepID=T3I5A9_CLODC
64_008_scaffold_69_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35295..36680
DNA (1386bp) protein (462aa)
Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, dihydrolipoyldehydrogenase subunit (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Dihydrolipoyl dehydrogenase n=176 Tax=Clostridium difficile RepID=T3IAA1_CLODC
64_008_scaffold_69_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36736..37506
DNA (771bp) protein (257aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=217 Tax=Clostridium difficile RepID=C9XLV1_CLODC
carbon monoxide dehydrogenase/acetyl-CoA synthase complex, nickel-inserting subunit
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EQG77310.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_69_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37526..38470
DNA (945bp) protein (315aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit n=204 Tax=Clostridium difficile RepID=C9XLV2_CLODC
acetyl-CoA decarbonylase/synthase complex subunit delta
Putative corrinoid/iron-sulfur protein small subunit {ECO:0000313|EMBL:EHJ31243.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_69_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38501..39868
DNA (1368bp) protein (456aa)
Carbon monoxide dehydrogenase corrinoid/iron-sulfur protein, gamma subunit n=163 Tax=Clostridium difficile RepID=C9XLV3_CLODC
acetyl-CoA decarbonylase/synthase complex subunit gamma
Acetyl-CoA decarbonylase/synthase complex subunit gamma {ECO:0000313|EMBL:CKH61189.1}; Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase, delta subunit {ECO:0000313|EMBL:CDS84091.1}; Bifunctional carbon monoxidedehydrogenase/acetyl-CoA synthase, delta subunit {ECO:0000313|EMBL:CEJ97273.1}; Putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit {ECO:0000313|EMBL:CDS84540.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_69_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39918..40724
DNA (807bp) protein (269aa)
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase n=219 Tax=Clostridium difficile RepID=C9XLV4_CLODC
carbon monoxide dehydrogenase/acetyl-CoA synthase complex, methyltransferase subunit
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase {ECO:0000313|EMBL:EQG77493.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Displaying items 1-30 of 47 in total

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