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64_008_scaffold_81

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_81_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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542..2353
DNA (1812bp) protein (604aa)
Diguanylate cyclase domain protein n=40 Tax=Clostridium difficile RepID=T2TYA5_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQH98939.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
putative signaling protein
64_008_scaffold_81_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2440..3021)
DNA (582bp) protein (194aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=Q185S0_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69017.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_81_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3358..3561
DNA (204bp) protein (68aa)
Cro/C1-type HTH DNA-binding domain protein n=113 Tax=Clostridium difficile RepID=C9XJZ6_CLODC
transcriptional regulator
Cro/C1-type HTH DNA-binding domain protein {ECO:0000313|EMBL:EQG76397.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_81_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3725..4879
DNA (1155bp) protein (385aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=28 Tax=Clostridium difficile RepID=DXR_CLOD6 rbh
64_008_scaffold_81_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4892..5896
DNA (1005bp) protein (335aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
RIP metalloprotease RseP n=180 Tax=Clostridium difficile RepID=T3GKQ6_CLODC
putative membrane-associated peptidase, M50family
64_008_scaffold_81_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6079..7134
DNA (1056bp) protein (352aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=47 Tax=Clostridium difficile RepID=T3GJ50_CLODC
64_008_scaffold_81_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7482..8306
DNA (825bp) protein (275aa)
Uncharacterized protein n=151 Tax=Clostridium difficile RepID=G6BQ61_CLODI
putative exported protein
Putative exported protein {ECO:0000313|EMBL:CDT15705.1}; Uncharacterised protein {ECO:0000313|EMBL:CKH22507.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_81_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8780..9904)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=21 Tax=Clostridium difficile RepID=T2UKD1_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDS87357.1}; Uncharacterized protein {ECO:0000313|EMBL:CKH22485.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_81_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10101..10325
DNA (225bp) protein (75aa)
Uncharacterized protein n=204 Tax=Clostridium difficile RepID=T3GI82_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62712.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_81_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10357..10902
DNA (546bp) protein (182aa)
Acetyltransferase family protein n=2 Tax=Clostridium difficile RepID=T4ARL9_CLODI
acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CBE05039.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_008_scaffold_81_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11007..11153)
DNA (147bp) protein (49aa)
Uncharacterized protein n=204 Tax=Clostridium difficile RepID=D5Q3I7_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQG75150.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_81_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11292..12218)
DNA (927bp) protein (309aa)
Membrane transport family protein n=164 Tax=Clostridium difficile RepID=T2TJE8_CLODI
transporter
Putative malate transporter {ECO:0000313|EMBL:CCL22417.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_81_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12408..14279
DNA (1872bp) protein (624aa)
Multiprotein-complex assembly protein {ECO:0000313|EMBL:CKH22348.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CKH22348.1};; Putative multiprotein-complex assembly TPRrepeat-containing protein {ECO:0000313|EMBL:CEJ98722.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
TPR repeat family protein n=110 Tax=Clostridium difficile RepID=T3GML6_CLODC
putative multiprotein-complex assembly TPRrepeat-containing protein
64_008_scaffold_81_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14371..15306)
DNA (936bp) protein (312aa)
CorA-like protein n=214 Tax=Clostridium difficile RepID=G6BCB3_CLODI
cations transporter
CorA-like Mg2+ transporter family protein {ECO:0000313|EMBL:EQE62721.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_81_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15826..16338
DNA (513bp) protein (171aa)
Flavin reductase like domain protein n=145 Tax=Clostridium difficile RepID=T3GNE0_CLODC
conserved hypothetical protein
Flavin reductase like domain protein {ECO:0000313|EMBL:EQE62718.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_81_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16493..17491)
DNA (999bp) protein (333aa)
Nitronate monooxygenase family protein n=212 Tax=Clostridium difficile RepID=C9XJY5_CLODC
2-nitropropane dioxygenase
Putative 2-nitropropane dioxygenase {ECO:0000313|EMBL:CCL22413.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_81_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17678..18571)
DNA (894bp) protein (298aa)
thrB; Homoserine kinase (HSK) (HK) (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Homoserine kinase n=174 Tax=Clostridium difficile RepID=T3GIB7_CLODC
64_008_scaffold_81_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18581..20062)
DNA (1482bp) protein (494aa)
thrC; Threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:CEJ98717.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CEJ98717.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Threonine synthase n=94 Tax=Clostridium difficile RepID=T3GJD6_CLODC
64_008_scaffold_81_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20892..21005
DNA (114bp) protein (38aa)
Putative membrane protein n=178 Tax=Clostridium difficile RepID=T2TKP3_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQE62725.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_81_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21203..22111
DNA (909bp) protein (303aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Thioredoxin reductase n=184 Tax=Clostridium difficile RepID=C9XJY2_CLODC
trxB2; thioredoxin reductase
64_008_scaffold_81_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22201..24024)
DNA (1824bp) protein (608aa)
GTP-binding protein n=211 Tax=Clostridium difficile RepID=C9XJY1_CLODC
GTP-binding protein TypA {ECO:0000313|EMBL:EHJ25791.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
GTP-binding protein
64_008_scaffold_81_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24236..24478
DNA (243bp) protein (81aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=D5Q3J7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK94562.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
conserved hypothetical protein
64_008_scaffold_81_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24626..24817
DNA (192bp) protein (64aa)
Uncharacterized protein n=221 Tax=Clostridium difficile RepID=T3GJH4_CLODC
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCK94561.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
64_008_scaffold_81_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25101..27602
DNA (2502bp) protein (834aa)
putative copper-transporting P-type ATPase (EC:3.6.3.4)
Copper transporter ATPase {ECO:0000313|EMBL:CDS88367.1}; Copper-transporting P-type ATPase {ECO:0000313|EMBL:CKH22077.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH22077.1};; Putative copper-transporting P-type ATPase {ECO:0000313|EMBL:CDT16079.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CDT16079.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Copper-translocating P-type ATPase n=70 Tax=Clostridium difficile RepID=T3GNK5_CLODC
64_008_scaffold_81_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27762..28430
DNA (669bp) protein (223aa)
Response regulator n=220 Tax=Clostridium difficile RepID=C9XJX9_CLODC
two-component system response regulator
Two-component response regulator {ECO:0000313|EMBL:CAJ68999.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_81_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28414..29691
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Two-component sensor histidine kinase n=158 Tax=Clostridium difficile RepID=Q185Q2_CLOD6
Two-component sensor histidine kinase
64_008_scaffold_81_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30092..30313
DNA (222bp) protein (74aa)
Uncharacterized protein n=164 Tax=Clostridium difficile RepID=C9XJX7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30330.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_81_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30602..31366)
DNA (765bp) protein (255aa)
Transcriptional regulator, DeoR family n=181 Tax=Clostridium difficile RepID=Q185Q0_CLOD6
DeoR family transcriptional regulator
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:EQH98912.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_008_scaffold_81_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31640..32314
DNA (675bp) protein (225aa)
putative transaldolase C-like (EC:2.2.1.2)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Fructose-6-phosphate aldolase n=146 Tax=Clostridium difficile RepID=T3GIM9_CLODC
64_008_scaffold_81_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32436..33848)
DNA (1413bp) protein (471aa)
Citrate transporter family protein n=10 Tax=Clostridium difficile RepID=T3P466_CLODI
sodium:sulfate symporter
Putative sodium:sulfate symporter {ECO:0000313|EMBL:CBE05010.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Displaying items 1-30 of 47 in total

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