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64_008_scaffold_128

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_128_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79..735)
DNA (657bp) protein (219aa)
Uncharacterized protein n=136 Tax=Clostridium difficile RepID=G6B2H2_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL32402.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_128_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2007..2417)
DNA (411bp) protein (137aa)
Uncharacterized protein n=103 Tax=Clostridium difficile RepID=T3IHQ7_CLODC
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH67472.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ97081.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_128_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2633..4015)
DNA (1383bp) protein (461aa)
BlaR1 peptidase M56 family protein n=26 Tax=Clostridium difficile RepID=T3IGL3_CLODC
putative penicillin-binding peptidaseBlaR1-like,M56 family
Putative penicillin-binding peptidase BlaR1-like,M56 family {ECO:0000313|EMBL:CAJ67381.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_128_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4026..4385)
DNA (360bp) protein (120aa)
Penicillinase repressor family protein n=204 Tax=Clostridium difficile RepID=C9XKI8_CLODC
penicillin-binding protein repressor
Transcriptional regulator, beta-lactams repressor {ECO:0000313|EMBL:CCK96456.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
64_008_scaffold_128_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4590..5387)
DNA (798bp) protein (266aa)
Uncharacterized protein n=48 Tax=Clostridium difficile RepID=T2WCX3_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02286.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_008_scaffold_128_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5830..6441)
DNA (612bp) protein (204aa)
Uncharacterized protein n=201 Tax=Clostridium difficile RepID=Q188Y7_CLOD6
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:CCL32373.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_128_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6533..7522)
DNA (990bp) protein (330aa)
putative ornithine cyclodeaminase (EC:4.3.1.12)
Oxidoreductase , NAD-binding Rossmann fold family protein n=131 Tax=Clostridium difficile RepID=T3IEK8_CLODC
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EQG77673.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_128_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7589..8452)
DNA (864bp) protein (288aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T3IHY3_CLODC
conserved hypothetical protein
Copper amine oxidase domain-containing protein {ECO:0000313|EMBL:CKH67667.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ97075.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_128_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8558..9154)
DNA (597bp) protein (199aa)
protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis-like protein-glutamate methylesterase {ECO:0000313|EMBL:CKH67710.1}; EC=3.1.1.61 {ECO:0000313|EMBL:CKH67710.1};; Uncharacterized protein {ECO:0000313|EMBL:CDS83696.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Uncharacterized protein n=80 Tax=Clostridium difficile RepID=Q188Y9_CLOD6
64_008_scaffold_128_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9194..9997)
DNA (804bp) protein (268aa)
cheR; Methyl-accepting chemotaxis proteinsmethyltransferase, MCP family (EC:2.1.1.80)
Methyltransferase domain protein n=124 Tax=Clostridium difficile RepID=T3IER0_CLODC
CheR methyltransferase, SAM binding domain protein {ECO:0000313|EMBL:EHJ34816.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_128_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10033..10473)
DNA (441bp) protein (147aa)
CheW-like domain protein n=182 Tax=Clostridium difficile RepID=C9XKI1_CLODC
chemotaxis protein
Chemotaxis protein CheW {ECO:0000313|EMBL:CCL24625.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_128_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10486..12618)
DNA (2133bp) protein (711aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Chemotaxis protein CheA n=37 Tax=Clostridium difficile RepID=U3YSD8_CLODI
cheA; chemotaxis protein
64_008_scaffold_128_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12801..12932)
DNA (132bp) protein (44aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=1 Tax=Clostridium difficile DA00145 RepID=T3PIP3_CLODI
methyl accpeting chemotaxis protein
Methyl accpeting chemotaxis protein {ECO:0000313|EMBL:CKH67896.1}; Putative methyl-accepting chemotaxis receptor, MCP family {ECO:0000313|EMBL:CDT24853.1}; Putative methyl-accepting chemotaxis receptor,MCP family {ECO:0000313|EMBL:CDS83781.1}; Putative methyl-accepting chemotaxisreceptor,MCP family {ECO:0000313|EMBL:CEJ97070.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_128_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13056..14504)
DNA (1449bp) protein (483aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=205 Tax=Clostridium difficile RepID=T3IBU4_CLODC
putative methyl-accepting chemotaxisreceptor,MCP family
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:EQG77946.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_128_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14530..15489)
DNA (960bp) protein (320aa)
Diguanylate cyclase domain protein n=194 Tax=Clostridium difficile RepID=T3ID58_CLODC
putative CheY-like chemosensory protein
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQG77763.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_128_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15625..16143)
DNA (519bp) protein (173aa)
CheW-like domain protein n=48 Tax=Clostridium difficile RepID=T3IEQ6_CLODC
cheW; Purine-binding chemotaxis protein CheW
Chemotaxis protein {ECO:0000313|EMBL:CKH67970.1}; Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:CEJ97068.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_128_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16186..16671)
DNA (486bp) protein (162aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium difficile CD69 RepID=T3AFB3_CLODI
chemotaxis protein
64_008_scaffold_128_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16668..17189)
DNA (522bp) protein (174aa)
cheC; Chemotaxis protein CheY-P phosphatase CheC (EC:3.-.-.-)
Chemotaxis protein CheC {ECO:0000313|EMBL:CKH68058.1}; EC=3.-.-.- {ECO:0000313|EMBL:CKH68058.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Chemotaxis protein CheY-P phosphatase CheC n=6 Tax=Clostridium difficile RepID=Q188X8_CLOD6
64_008_scaffold_128_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17350..17712)
DNA (363bp) protein (121aa)
Chemotaxis protein CheY n=138 Tax=Clostridium difficile RepID=T3IBT8_CLODC
cheY; chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:EQG78035.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_128_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18456..18953)
DNA (498bp) protein (166aa)
GyrI-like small molecule binding domain protein n=43 Tax=Clostridium difficile RepID=T3IDE3_CLODC
putative transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH68156.1}; Putative transcriptional regulator {ECO:0000313|EMBL:CEJ97064.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_128_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19128..20039)
DNA (912bp) protein (304aa)
DeoR-family transcriptional regulator n=200 Tax=Clostridium difficile RepID=C9XKH2_CLODC
DeoR family transcriptional regulator
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:EQG77747.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_128_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20963..21814
DNA (852bp) protein (284aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=G6BX77_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL32275.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_128_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21818..22288
DNA (471bp) protein (157aa)
Uncharacterized protein n=213 Tax=Clostridium difficile RepID=D5Q0B8_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL00456.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
64_008_scaffold_128_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22301..23611
DNA (1311bp) protein (437aa)
Amidohydrolase n=13 Tax=Clostridium difficile RepID=G6BX75_CLODI
putative amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CKH68278.1}; Putative amidohydrolase {ECO:0000313|EMBL:CEJ97060.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_128_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23823..24569
DNA (747bp) protein (249aa)
Metallo-beta-lactamase domain protein n=12 Tax=Clostridium difficile RepID=G6BX74_CLODI
putative beta-lactamase-like hydrolase
Putative beta-lactamase-like hydrolase {ECO:0000313|EMBL:CAJ67360.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_128_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24931..26472
DNA (1542bp) protein (514aa)
C4-dicarboxylate anaerobic carrier family protein n=145 Tax=Clostridium difficile RepID=T2TPM3_CLODI
aminobenzoyl-glutamate transporter
Putative aminobenzoyl-glutamate transporter {ECO:0000313|EMBL:CBE02250.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_008_scaffold_128_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26507..27517
DNA (1011bp) protein (337aa)
putative peptidase, M20 family (EC:3.4.11.-)
Putative peptidase, M20 family {ECO:0000313|EMBL:CAJ67358.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAJ67358.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
M42 glutamyl aminopeptidase family protein n=5 Tax=Clostridium difficile RepID=T2U4Z7_CLODI
64_008_scaffold_128_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27896..29182)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=167 Tax=Clostridium difficile RepID=T3IIF9_CLODC
putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EQG77556.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_128_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29305..32403)
DNA (3099bp) protein (1033aa)
Diguanylate cyclase domain protein n=24 Tax=Clostridium difficile RepID=T2U7H2_CLODI
Putative signaling protein {ECO:0000313|EMBL:CAJ67356.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
putative signaling protein
64_008_scaffold_128_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33095..33289
DNA (195bp) protein (65aa)
Putative membrane protein n=3 Tax=Clostridium difficile RepID=T2V0C3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ28337.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
conserved hypothetical protein
Displaying items 1-30 of 39 in total

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