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64_008_scaffold_161

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_161_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..460)
DNA (459bp) protein (153aa)
dpaL; diaminopropionate ammonia-lyase (EC:4.3.1.15)
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:CAJ70081.1}; EC=4.3.1.15 {ECO:0000313|EMBL:CAJ70081.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Pyridoxal-phosphate dependent enzyme family protein n=8 Tax=Clostridium difficile RepID=T3QZK7_CLODI
64_008_scaffold_161_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1083..1277)
DNA (195bp) protein (65aa)
Uncharacterized protein n=12 Tax=Clostridium difficile RepID=G6BQL4_CLODI
hypothetical protein
2'-5' RNA ligase superfamily protein {ECO:0000313|EMBL:EQG73743.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_161_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1238..1621)
DNA (384bp) protein (128aa)
Uncharacterized protein n=23 Tax=Clostridium difficile RepID=T2TTM7_CLODI
2'-5' RNA ligase {ECO:0000313|EMBL:CKG81119.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
64_008_scaffold_161_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1698..3515)
DNA (1818bp) protein (606aa)
Sigma-54 interaction domain protein n=150 Tax=Clostridium difficile RepID=G6BQL6_CLODI
Transcriptional regulator, sigma-54-dependent
Sigma54-dependent transcriptional regulator {ECO:0000313|EMBL:CKG81076.1}; Transcriptional regulator, sigma-54-dependent {ECO:0000313|EMBL:CEJ99836.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_161_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3899..4276)
DNA (378bp) protein (126aa)
Translation initiation inhibitor n=208 Tax=Clostridium difficile RepID=T2T987_CLODI
tdcF; regulatory endoribonuclease
Putative regulatory endoribonuclease {ECO:0000313|EMBL:CCK95694.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
64_008_scaffold_161_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5181..5666
DNA (486bp) protein (162aa)
Uncharacterized protein n=179 Tax=Clostridium difficile RepID=T3G448_CLODC
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:EQG73800.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_161_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5866..6405)
DNA (540bp) protein (180aa)
Flavin reductase {ECO:0000313|EMBL:CDS85523.1}; Iron-sulfur flavoprotein {ECO:0000313|EMBL:CKG80988.1}; EC=1.-.-.- {ECO:0000313|EMBL:CKG80988.1};; Putative NADPH-dependent FMN reductase {ECO:0000313|EMBL:CDT55422.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
NADPH-dependent FMN reductase family protein n=121 Tax=Clostridium difficile RepID=T3G2D4_CLODC
putative NADPH-dependent FMN reductase
64_008_scaffold_161_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6398..6811)
DNA (414bp) protein (138aa)
HTH-type transcriptional regulator AdhR n=187 Tax=Clostridium difficile RepID=C9XRB0_CLODC
MerR family transcriptional regulator
MerR-family transcriptional regulator {ECO:0000313|EMBL:CBE06820.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_008_scaffold_161_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6847..7968)
DNA (1122bp) protein (374aa)
Aldo/keto reductase family protein n=132 Tax=Clostridium difficile RepID=C9XRD6_CLODC
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CBE06822.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_008_scaffold_161_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8567..10219
DNA (1653bp) protein (551aa)
Cell surface protein {ECO:0000313|EMBL:CKG80901.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CKG80901.1};; Putative cell surface peptidase, M4family-cwp20 {ECO:0000313|EMBL:CEJ99843.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Peptidase propeptide and YPEB domain protein n=26 Tax=Clostridium difficile RepID=T3IM90_CLODC
cwp21; putative cell surface peptidase, M4family-cwp20
64_008_scaffold_161_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10566..11492)
DNA (927bp) protein (309aa)
Conserved phage family protein n=16 Tax=Clostridium difficile RepID=T2T916_CLODI
putative phage-related protein
Phage-related regulatory protein {ECO:0000313|EMBL:CKG80859.1}; Putative phage-related protein {ECO:0000313|EMBL:CEJ99844.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_161_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12102..13022
DNA (921bp) protein (307aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=182 Tax=Clostridium difficile RepID=T3G2A8_CLODC
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCL23604.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_161_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13108..15528
DNA (2421bp) protein (807aa)
Excinuclease ABC subunit A n=77 Tax=Clostridium difficile RepID=T3G1I0_CLODC
Putative UvrABC system protein A 2 (UvrA protein 2) (Excinuclease ABC subunit A 2) {ECO:0000313|EMBL:CAJ70092.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
putative UvrABC system protein A 2 (UvrA protein2) (Excinuclease ABC subunit A 2)
64_008_scaffold_161_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15528..16550
DNA (1023bp) protein (341aa)
Penicillin-binding protein {ECO:0000313|EMBL:CKG80759.1}; EC=3.5.1.46 {ECO:0000313|EMBL:CKG80759.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Beta-lactamase family protein n=86 Tax=Clostridium difficile RepID=T3G5G3_CLODC
penicillin-binding protein
64_008_scaffold_161_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16703..17449
DNA (747bp) protein (249aa)
MerR regulatory family protein n=136 Tax=Clostridium difficile RepID=C9XRE6_CLODC
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCL23607.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_161_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17535..18785
DNA (1251bp) protein (417aa)
Major Facilitator Superfamily protein n=189 Tax=Clostridium difficile RepID=T3G428_CLODC
cme; Multidrug resistance protein Cme;Transporter,Major Facilitator Superfamily (MFS)
Multidrug resistance protein Cme Transporter,Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CAJ70095.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_161_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19302..20315)
DNA (1014bp) protein (338aa)
ABC-2 transporter family protein n=11 Tax=Clostridium difficile RepID=T3G2B3_CLODC
ABC-type transport system, multidrug-familypermease
ABC transporter permease {ECO:0000313|EMBL:CKG80685.1}; ABC-type transport system, multidrug-familypermease {ECO:0000313|EMBL:CEJ99850.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_161_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20318..21346)
DNA (1029bp) protein (343aa)
ABC-type transport system, multidrug-family permease n=118 Tax=Clostridium difficile RepID=Q17ZU5_CLOD6
ABC-type transport system, multidrug-familypermease
ABC transporter permease {ECO:0000313|EMBL:CKG80662.1}; ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CDT55729.1}; ABC-type transport system, multidrug-familypermease {ECO:0000313|EMBL:CEJ99851.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_161_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21346..22191)
DNA (846bp) protein (282aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CAJ70098.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ70098.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
ABC transporter family protein n=6 Tax=Clostridium difficile RepID=T3G5H0_CLODC
64_008_scaffold_161_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22188..22310)
DNA (123bp) protein (41aa)
Uncharacterized protein n=73 Tax=Clostridium difficile RepID=G6BQN2_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQG73795.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_161_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22609..23739)
DNA (1131bp) protein (377aa)
Two-component sensor histidine kinase {ECO:0000313|EMBL:CDS85483.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CKG80579.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
HAMP domain protein n=50 Tax=Clostridium difficile RepID=T3G432_CLODC
Two-component sensor histidine kinase
64_008_scaffold_161_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23736..24407)
DNA (672bp) protein (224aa)
Response regulator n=64 Tax=Clostridium difficile RepID=T3G2B9_CLODC
Two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CAJ70100.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_161_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24610..25260)
DNA (651bp) protein (217aa)
Membrane insertase, YidC/Oxa1 family domain protein n=69 Tax=Clostridium difficile RepID=T3G1J3_CLODC
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ70101.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_161_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25317..25547)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Clostridium difficile RepID=UPI00016C5F07
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG80486.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_161_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26111..26704
DNA (594bp) protein (198aa)
Nitroreductase {ECO:0000313|EMBL:CKG80452.1}; EC=1.6.99.- {ECO:0000313|EMBL:CKG80452.1};; Putative nitroreductase {ECO:0000313|EMBL:CEJ99856.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Nitroreductase family protein n=176 Tax=Clostridium difficile RepID=C9XRF4_CLODC
nitroreductase
64_008_scaffold_161_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26760..27071
DNA (312bp) protein (104aa)
Uncharacterized protein n=102 Tax=Clostridium difficile RepID=G6BQN7_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCL23654.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_161_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27635..29038)
DNA (1404bp) protein (468aa)
MATE efflux family protein n=81 Tax=Clostridium difficile RepID=T3G5F8_CLODC
MATE efflux family protein {ECO:0000313|EMBL:EQE59559.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Na+ driven multidrug efflux pump
64_008_scaffold_161_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29022..29549)
DNA (528bp) protein (176aa)
Transcriptional regulator, MarR family n=58 Tax=Clostridium difficile RepID=D5Q7S9_CLODI
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCK95726.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
MarR family transcriptional regulator
64_008_scaffold_161_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29829..30344
DNA (516bp) protein (172aa)
Transcriptional regulator PadR-like family protein n=91 Tax=Clostridium difficile RepID=T3G291_CLODC
Transcriptional regulator, PadR family
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:EQE59598.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_161_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30393..30896
DNA (504bp) protein (168aa)
Uncharacterized protein n=55 Tax=Clostridium difficile RepID=Q17ZV6_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ70107.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Displaying items 1-30 of 36 in total

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