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64_008_scaffold_176

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_176_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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83..820
DNA (738bp) protein (246aa)
CRISPR-associated endoribonuclease Cas6 n=74 Tax=Clostridium difficile RepID=T3GIH6_CLODC
putative CRISPR-associated protein
CRISPR-associated endoribonuclease Cas6 {ECO:0000313|EMBL:CKH32957.1}; Putative CRISPR-associated protein {ECO:0000313|EMBL:CEJ99076.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_176_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

825..2300
DNA (1476bp) protein (492aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T3GE73_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69341.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_176_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2320..3336
DNA (1017bp) protein (339aa)
CRISPR-associated autoregulator DevR family protein n=74 Tax=Clostridium difficile RepID=T3GF48_CLODC
putative CRISPR-associated negativeautoregulator
Putative CRISPR-associated negative autoregulator {ECO:0000313|EMBL:CCL22789.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_176_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3352..4149
DNA (798bp) protein (266aa)
CRISPR-associated Cas5 domain protein n=74 Tax=Clostridium difficile RepID=T3GGS3_CLODC
putative CRISPR-associated protein
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:CKH32900.1}; Putative CRISPR-associated protein {ECO:0000313|EMBL:CEJ99073.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_176_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4176..6584
DNA (2409bp) protein (803aa)
CRISPR-associated endonuclease Cas3-HD n=74 Tax=Clostridium difficile RepID=T2TX98_CLODI
Putative CRISPR-associated ATP-dependent helicase {ECO:0000313|EMBL:CAJ69338.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
putative CRISPR-associated ATP-dependenthelicase
64_008_scaffold_176_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7025..7972
DNA (948bp) protein (316aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Ribosomal protein L11 methyltransferase n=133 Tax=Clostridium difficile RepID=T3GE83_CLODC
prmA; ribosomal protein L11 methyltransferase
64_008_scaffold_176_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7991..8749
DNA (759bp) protein (253aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Ribosomal RNA small subunit methyltransferase E n=178 Tax=Clostridium difficile RepID=C9XLN3_CLODC
hypothetical protein
64_008_scaffold_176_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8751..10049
DNA (1299bp) protein (433aa)
tRNA methylthiotransferase YqeV n=161 Tax=Clostridium difficile RepID=G6BZJ4_CLODI
radical SAM protein
Putative MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CCL22784.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_176_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10092..10442
DNA (351bp) protein (117aa)
HIT domain protein n=208 Tax=Clostridium difficile RepID=C9XLN1_CLODC
histidine triad nucleotide-binding protein
Putative histidine triad (HIT) protein {ECO:0000313|EMBL:CCL22783.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_176_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10605..10784
DNA (180bp) protein (60aa)
30S ribosomal protein S21 n=221 Tax=Clostridium difficile RepID=RS21_CLOD6
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_176_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10814..11257
DNA (444bp) protein (148aa)
YqeY-like protein n=222 Tax=Clostridium difficile RepID=D5Q2K1_CLODI
rpsU; tRNA binding protein
Putative aspartyl/glutamyl-tRNA amidotransferase subunit B-related {ECO:0000313|EMBL:CCL30682.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_176_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11368..11865
DNA (498bp) protein (166aa)
Probale sensory protein n=194 Tax=Clostridium difficile RepID=C9XLM8_CLODC
hypothetical protein
Putative transmembrane signaling protein,TspO/MBR family {ECO:0000313|EMBL:CCL22780.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_008_scaffold_176_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12058..12621
DNA (564bp) protein (188aa)
Ribosomal subunit interface protein n=205 Tax=Clostridium difficile RepID=G6BCV3_CLODI
sigma 54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EHJ25265.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_176_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12828..13070
DNA (243bp) protein (81aa)
Uncharacterized protein n=223 Tax=Clostridium difficile RepID=C9XLM6_CLODC
hypothetical protein
Putative sporulation protein YqfC {ECO:0000313|EMBL:EFH07727.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
64_008_scaffold_176_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13083..14426
DNA (1344bp) protein (448aa)
Sporulation protein YqfD n=65 Tax=Clostridium difficile RepID=T3GIL0_CLODC
spoIV; Stage IV sporulation protein
Putative stage IV sporulation protein {ECO:0000313|EMBL:CKH32508.1}; Stage IV sporulation protein {ECO:0000313|EMBL:CEJ99062.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_176_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14365..15480
DNA (1116bp) protein (372aa)
PhoH-like protein n=28 Tax=Clostridium difficile RepID=U3WMD8_CLODI
PhoH-like protein {ECO:0000313|EMBL:CCL30677.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
PhoH-like protein
64_008_scaffold_176_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15537..15998
DNA (462bp) protein (154aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Endoribonuclease YbeY n=209 Tax=Clostridium difficile RepID=YBEY_CLOD6 rbh
hypothetical protein
64_008_scaffold_176_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16004..16723
DNA (720bp) protein (240aa)
PAP2 superfamily protein n=208 Tax=Clostridium difficile RepID=C9XLM2_CLODC
membrane-associated kinase and phosphatase
PAP2 family protein {ECO:0000313|EMBL:EFH07731.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
64_008_scaffold_176_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16842..17243
DNA (402bp) protein (134aa)
Cytidine deaminase {ECO:0000313|EMBL:EQE61002.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EQE61002.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Cytidine deaminase n=168 Tax=Clostridium difficile RepID=C9XLM1_CLODC
cytidine deaminase
64_008_scaffold_176_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17307..18200
DNA (894bp) protein (298aa)
GTPase Era n=187 Tax=Clostridium difficile RepID=ERA_CLOD6 rbh
era; GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
64_008_scaffold_176_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18212..19591
DNA (1380bp) protein (460aa)
Magnesium transporter n=212 Tax=Clostridium difficile RepID=C9XLL9_CLODC
Mg2+ transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_176_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19664..19819
DNA (156bp) protein (52aa)
YqzL-like family protein n=221 Tax=Clostridium difficile RepID=T3GF77_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30671.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_176_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19785..20558
DNA (774bp) protein (258aa)
DNA repair protein RecO n=25 Tax=Clostridium difficile RepID=RECO_CLOD6 rbh
recO; DNA repair protein RecO (Recombination proteinO)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_176_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20548..21150
DNA (603bp) protein (201aa)
Uncharacterized protein n=203 Tax=Clostridium difficile RepID=Q182C1_CLOD6
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCK87772.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
64_008_scaffold_176_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21310..22188
DNA (879bp) protein (293aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Glycine--tRNA ligase alpha subunit n=219 Tax=Clostridium difficile RepID=SYGA_CLOD6 rbh
64_008_scaffold_176_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22188..24254
DNA (2067bp) protein (689aa)
Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};; Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
glyS; Glycyl-tRNA synthetase beta subunit(Glycine--tRNA ligase beta subunit) (GlyRS) (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=29 Tax=Clostridium difficile RepID=SYGB_CLOD6 rbh
64_008_scaffold_176_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24420..25967)
DNA (1548bp) protein (516aa)
Nitrite/sulfite reductase {ECO:0000313|EMBL:CKH32105.1}; EC=1.8.7.1 {ECO:0000313|EMBL:CKH32105.1};; Putative nitrite/sulphite reductase {ECO:0000313|EMBL:CDS85417.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CDS85417.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Nitrite/Sulfite reductase ferredoxin-like half domain protein n=137 Tax=Clostridium difficile RepID=C9XLL4_CLODC
nitrite/sulfite reductase
64_008_scaffold_176_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26247..27014
DNA (768bp) protein (256aa)
Bacterial transcriptional regulator family protein n=218 Tax=Clostridium difficile RepID=C9XLL3_CLODC
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CCL30665.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_176_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27297..27494
DNA (198bp) protein (66aa)
4Fe-4S binding domain protein n=216 Tax=Clostridium difficile RepID=D5Q2L9_CLODI
oxidoreductase ferredoxin subunit
4Fe-4S binding domain protein {ECO:0000313|EMBL:EQG75803.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_176_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27523..28599
DNA (1077bp) protein (359aa)
Putative flavodoxin/ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CCL22762.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCL22762.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein n=213 Tax=Clostridium difficile RepID=D5Q2M0_CLODI
oxidoreductase subunit
Displaying items 1-30 of 36 in total

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