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64_008_scaffold_287

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_287_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

340..798
DNA (459bp) protein (153aa)
PTS system, fructose/mannitol family IIAcomponent (EC:2.7.1.69)
PTS system galactitol-specific transporter subunit IIA {ECO:0000313|EMBL:CKH28567.1}; PTS system, fructose/mannitol family IIAcomponent {ECO:0000313|EMBL:CEJ98945.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CEJ98945.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein n=28 Tax=Clostridium difficile RepID=T3GFD0_CLODC
64_008_scaffold_287_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

859..1134
DNA (276bp) protein (92aa)
gatB; PTS system galactitol-specific transporter subunit IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=204 Tax=Clostridium difficile RepID=C9XLA8_CLODC
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EQE61941.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_287_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1193..2467
DNA (1275bp) protein (425aa)
PTS system, galactitol-specific IIC component family protein n=63 Tax=Clostridium difficile RepID=T3GI33_CLODC
PTS system, fructose/mannitol family IICcomponent
PTS system, fructose/mannitol family IIC component {ECO:0000313|EMBL:CAJ69212.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_287_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2597..3649
DNA (1053bp) protein (351aa)
putative sugar-phosphate dehydrogenase (EC:1.1.1.-)
Zinc-binding dehydrogenase family protein n=56 Tax=Clostridium difficile RepID=T3GKB8_CLODC
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EQE61955.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_287_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3649..4680
DNA (1032bp) protein (344aa)
putative sugar-phosphate dehydrogenase (EC:1.1.1.-)
Putative sugar-phosphate dehydrogenase {ECO:0000313|EMBL:CAJ69210.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAJ69210.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Zinc-binding dehydrogenase family protein n=28 Tax=Clostridium difficile RepID=T3GJS1_CLODC
64_008_scaffold_287_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4772..5584
DNA (813bp) protein (271aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=135 Tax=Clostridium difficile RepID=C9XLA4_CLODC
tkt; transketolase
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EHJ25137.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_008_scaffold_287_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5587..6507
DNA (921bp) protein (307aa)
Transketolase, central and C-terminal (Sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glycolaldehydetransferase) {ECO:0000313|EMBL:CAJ69208.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CAJ69208.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Transketolase n=129 Tax=Clostridium difficile RepID=C9XLA3_CLODC
tkt'; transketolase
64_008_scaffold_287_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6682..7128
DNA (447bp) protein (149aa)
rpiB1; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B1 (Phosphoriboisomerase B) {ECO:0000313|EMBL:CCL30532.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CCL30532.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Ribose 5-phosphate isomerase B n=214 Tax=Clostridium difficile RepID=C9XLA2_CLODC
64_008_scaffold_287_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7158..7823
DNA (666bp) protein (222aa)
Ribulose-phosphate 3 epimerase family protein n=170 Tax=Clostridium difficile RepID=T2TCZ2_CLODI
rpe; ribulose-phosphate 3-epimerase
Ribulose-phosphate 3 epimerase family protein {ECO:0000313|EMBL:EQG75490.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_287_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7933..9435
DNA (1503bp) protein (501aa)
phosphohexomutase (EC:5.4.2.-)
Phosphoglucomutase {ECO:0000313|EMBL:CKH28283.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CKH28283.1};; Putative phosphohexomutase {ECO:0000313|EMBL:CEJ98936.1}; EC=5.4.2.- {ECO:0000313|EMBL:CEJ98936.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein n=101 Tax=Clostridium difficile RepID=T3GJR6_CLODC
64_008_scaffold_287_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9621..11336)
DNA (1716bp) protein (572aa)
Two-component sensor histidine kinase {ECO:0000313|EMBL:CKH28254.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CKH28254.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Two-component sensor histidine kinase n=1 Tax=Clostridium difficile T22 RepID=U3WNN0_CLODI
Two-component sensor histidine kinase
64_008_scaffold_287_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11305..12021)
DNA (717bp) protein (239aa)
Response regulator n=175 Tax=Clostridium difficile RepID=T3GKD8_CLODC
Two-component response regulator
Response regulator {ECO:0000313|EMBL:EQI81397.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_008_scaffold_287_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12561..13361)
DNA (801bp) protein (267aa)
Uncharacterized protein n=136 Tax=Clostridium difficile RepID=Q185I9_CLOD6
putative exported protein
Putative exported protein {ECO:0000313|EMBL:CAJ69202.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_287_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13675..14406)
DNA (732bp) protein (244aa)
Uncharacterized protein n=69 Tax=Clostridium difficile RepID=C9XL96_CLODC
hypothetical protein
Domain of uncharacterised function (DUF364) {ECO:0000313|EMBL:CKH28164.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS85650.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_287_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14357..15088)
DNA (732bp) protein (244aa)
molybdenum-like ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC-type transport system, molybdenum-like ATP-binding protein {ECO:0000313|EMBL:CAJ69200.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ69200.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
ABC transporter family protein n=12 Tax=Clostridium difficile RepID=T3GGI2_CLODC
64_008_scaffold_287_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15090..15803)
DNA (714bp) protein (238aa)
ABC-type transport system, molybdenum-like permease n=43 Tax=Clostridium difficile RepID=Q185I6_CLOD6
modB; ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:CBE05335.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_008_scaffold_287_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15891..16703)
DNA (813bp) protein (271aa)
ABC transporter, substrate-binding protein0 n=204 Tax=Clostridium difficile RepID=C9XL93_CLODC
ABC transporter substrate-binding protein
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EQE61950.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_287_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17338..17538)
DNA (201bp) protein (67aa)
Cold shock protein n=177 Tax=Clostridium difficile RepID=C9XL92_CLODC
cspD; cold shock protein
Cold shock protein CspD {ECO:0000313|EMBL:EQE61947.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_287_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17763..17939)
DNA (177bp) protein (59aa)
Uncharacterized protein n=157 Tax=Clostridium difficile RepID=T3GGK1_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG76855.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_008_scaffold_287_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18262..18462)
DNA (201bp) protein (67aa)
Helix-turn-helix family protein n=89 Tax=Clostridium difficile RepID=C9XL88_CLODC
transcriptional regulator
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCK91071.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
64_008_scaffold_287_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18464..18814)
DNA (351bp) protein (117aa)
Uncharacterized protein n=37 Tax=Clostridium difficile RepID=T3GKH9_CLODC
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ69194.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_287_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18976..19209
DNA (234bp) protein (78aa)
Uncharacterized protein n=137 Tax=Clostridium difficile RepID=T3GJW9_CLODC
Uncharacterized protein {ECO:0000313|EMBL:CCL22634.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
64_008_scaffold_287_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20201..20695)
DNA (495bp) protein (165aa)
Prepilin-type N-terminal cleavage/methylation domain protein n=44 Tax=Clostridium difficile RepID=T3GFH0_CLODC
putative pilin protein
Pilin protein {ECO:0000313|EMBL:CKH27937.1}; Putative pilin protein {ECO:0000313|EMBL:CEJ98921.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_287_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21499..21897
DNA (399bp) protein (133aa)
Transcriptional regulator, beta-lactams repressor Phage-type n=41 Tax=Clostridium difficile RepID=Q185H5_CLOD6
Transcriptional regulator, beta-lactamsrepressor Phage-type
Transcriptional regulator, beta-lactams repressor Phage-type {ECO:0000313|EMBL:CAJ69190.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_287_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21981..22172
DNA (192bp) protein (64aa)
Penicillinase repressor family protein n=71 Tax=Clostridium difficile RepID=T3GGN4_CLODC
repressor
Repressor (Partial) {ECO:0000313|EMBL:CKH27882.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Displaying 25 items

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