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64_008_scaffold_378

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_378_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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683..2011
DNA (1329bp) protein (443aa)
Amino acid permease family protein n=100 Tax=Clostridium difficile RepID=T3HBT7_CLODC
putative amino acid permease
Amino acid permease family protein {ECO:0000313|EMBL:EQE66122.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_378_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2764..3597
DNA (834bp) protein (278aa)
Polysaccharide deacetylase {ECO:0000313|EMBL:CKH06780.1}; EC=3.-.-.- {ECO:0000313|EMBL:CKH06780.1};; Putative polysaccharide deacetylase {ECO:0000313|EMBL:CDS84603.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Polysaccharide deacetylase family protein n=62 Tax=Clostridium difficile RepID=T3H6W0_CLODC
putative polysaccharide deacetylase
64_008_scaffold_378_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3666..4622
DNA (957bp) protein (319aa)
putative peptidylprolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
SurA N-terminal domain protein n=122 Tax=Clostridium difficile RepID=T3HBS6_CLODC
64_008_scaffold_378_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4674..5156
DNA (483bp) protein (161aa)
RNA polymerase sigma factor n=159 Tax=Clostridium difficile RepID=C9XQJ7_CLODC
sigV; RNA polymerase sigma factor
Extra-Cytoplasmic Function sigma factors, ECF family {ECO:0000313|EMBL:CDS84605.1}; Extracytoplasmic function (ECF) sigma factorcsfV {ECO:0000313|EMBL:CEJ98149.1}; RNA polymerase ECF(Extracytoplasmic function)-type sigma factor (Sigma(V)) {ECO:0000313|EMBL:CDS86688.1}; RNA polymerase sigma factor {ECO:0000313|EMBL:CKH06833.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_378_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5168..6037
DNA (870bp) protein (290aa)
Anti-sigma-V factor rsiV n=146 Tax=Clostridium difficile RepID=T3H9T4_CLODC
rsiV; extracytoplasmic function (ECF) anti-sigmafactor rsiV
Anti-sigma-V factor rsiV {ECO:0000313|EMBL:EQE66032.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_378_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6080..6835
DNA (756bp) protein (252aa)
Uncharacterized protein n=29 Tax=Clostridium difficile RepID=T3H8G2_CLODC
conserved hypothetical protein
Anti-sigma(V) factor RsiV {ECO:0000313|EMBL:CKH06887.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98151.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_008_scaffold_378_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6877..7698
DNA (822bp) protein (274aa)
XdhC and CoxI family protein n=169 Tax=Clostridium difficile RepID=T3H6W6_CLODC
putative xanthine dehydrogenase accessoryfactor
XdhC and CoxI family protein {ECO:0000313|EMBL:EQE65988.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_378_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7703..8464
DNA (762bp) protein (254aa)
Uncharacterized protein n=83 Tax=Clostridium difficile RepID=T3HBT2_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68427.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_378_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8565..8687
DNA (123bp) protein (41aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=T2YKA1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE66011.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_008_scaffold_378_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8995..9234
DNA (240bp) protein (80aa)
Uncharacterized protein n=214 Tax=Clostridium difficile RepID=C9XQK2_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29713.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_008_scaffold_378_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9544..10533
DNA (990bp) protein (330aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Ketol-acid reductoisomerase n=59 Tax=Clostridium difficile RepID=ILVC_CLOD6 rbh
64_008_scaffold_378_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10586..12274
DNA (1689bp) protein (563aa)
ilvB; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit {ECO:0000313|EMBL:CCL21706.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CCL21706.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Acetolactate synthase large subunit n=39 Tax=Clostridium difficile RepID=Q186C0_CLOD6
64_008_scaffold_378_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12485..13162
DNA (678bp) protein (226aa)
manganese catalase (EC:1.11.1.6)
Manganese-containing catalase {ECO:0000313|EMBL:CKH07042.1}; EC=1.11.1.6 {ECO:0000313|EMBL:CKH07042.1};; Putative manganese catalase {ECO:0000313|EMBL:CDS87064.1}; EC=1.11.1.6 {ECO:0000313|EMBL:CDS87064.1};; Spore coat protein-manganese catalase {ECO:0000313|EMBL:CEJ98157.1}; EC=1.11.1.6 {ECO:0000313|EMBL:CEJ98157.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Rubrerythrin family protein n=131 Tax=Clostridium difficile RepID=T2TLE9_CLODI
64_008_scaffold_378_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13336..15372
DNA (2037bp) protein (679aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=Q186C3_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68432.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_378_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15563..16129)
DNA (567bp) protein (189aa)
MarR-family transcriptional regulator n=57 Tax=Clostridium difficile RepID=C9XT29_CLODC
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EQH99978.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_008_scaffold_378_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16417..16953
DNA (537bp) protein (179aa)
Alpha/beta hydrolase fold family protein n=24 Tax=Clostridium difficile RepID=T2U0A2_CLODI
Group I intron
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:CAJ68434.3}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Displaying 16 items

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