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64_010_scaffold_9

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Displaying items 1-30 of 206 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_9_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(142..1545)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MF67_BIFBI
Putative phosphohydrolase {ECO:0000313|EMBL:KFI95549.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
putative phosphohydrolase
64_010_scaffold_9_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1860..3770
DNA (1911bp) protein (637aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0H3_BIFBU
64_010_scaffold_9_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4128..5249
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3G6_BIFAD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32391.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
endo-1,4-beta-xylanase
64_010_scaffold_9_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5315..5857)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSX1_BIFLJ
ATPase {ECO:0000313|EMBL:KEY27381.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein; K07133
64_010_scaffold_9_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5854..6669)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUE9_BIFLS
Putative ATPase {ECO:0000313|EMBL:KFI95546.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
64_010_scaffold_9_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7067..8263)
DNA (1197bp) protein (399aa)
Aspartate aminotransferase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W3W1_9MICO
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32388.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
64_010_scaffold_9_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8509..10146)
DNA (1638bp) protein (546aa)
ABC transporter substrate-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B452B5
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32387.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
64_010_scaffold_9_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10339..11493
DNA (1155bp) protein (385aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Peptidase M24 n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5R2_9MICO
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32386.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
64_010_scaffold_9_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11589..12947
DNA (1359bp) protein (453aa)
Putative acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XHW2_9MICO
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32385.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
peptidase M20
64_010_scaffold_9_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12957..13511
DNA (555bp) protein (185aa)
Putative transcriptional regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2YIT0_9MICO
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32384.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
64_010_scaffold_9_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13658..16102)
DNA (2445bp) protein (815aa)
Penicillin-binding protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AU48_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32383.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
penicillin-binding protein
64_010_scaffold_9_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16460..17707
DNA (1248bp) protein (416aa)
ABC transporter, extracellular substrate binding protein, probably raffinose/stachyose transporter n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4ILX9_BIFAP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32382.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter, extracellular substrate binding protein, probably raffinose/stachyose transporter
64_010_scaffold_9_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18020..19174
DNA (1155bp) protein (385aa)
Putative pre-pilin peptidase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H7D8_9BIFI
ABC transporter {ECO:0000313|EMBL:KFI95538.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
64_010_scaffold_9_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19265..22240
DNA (2976bp) protein (992aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
topA; topA DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase 1 n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQK0_BIFBS
64_010_scaffold_9_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22843..23571
DNA (729bp) protein (243aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase n=6 Tax=Bifidobacterium RepID=E3EQJ9_BIFBS
64_010_scaffold_9_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23568..24746
DNA (1179bp) protein (393aa)
holB; DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III subunit delta n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I8A4_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32377.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
64_010_scaffold_9_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25036..26091)
DNA (1056bp) protein (352aa)
LacI-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q7W1_BIFDB
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32376.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
64_010_scaffold_9_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26291..26551)
DNA (261bp) protein (87aa)
Phosphocarrier protein HPr n=7 Tax=Bifidobacterium RepID=E3EQJ6_BIFBS
Phosphocarrier protein HPr {ECO:0000313|EMBL:KFI95533.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
phosphocarrier protein HPr; K11189 phosphocarrier protein
64_010_scaffold_9_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26800..28449
DNA (1650bp) protein (550aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
phosphoenolpyruvate-protein phosphotransferase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT84_BIFLS
64_010_scaffold_9_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28758..29312
DNA (555bp) protein (185aa)
Phospholipid-binding protein n=6 Tax=Bifidobacterium RepID=F8AU43_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32373.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
phospholipid-binding protein; K06910
64_010_scaffold_9_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29398..31071
DNA (1674bp) protein (558aa)
pepD; dipeptidase A PepD; K08659 dipeptidase [EC:3.4.-.-]
Dipeptidase n=2 Tax=Bifidobacterium dentium RepID=E0Q9M6_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32372.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
64_010_scaffold_9_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31252..32769
DNA (1518bp) protein (506aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate-tetrahydrofolate ligase n=2 Tax=Bifidobacterium bifidum RepID=K2HS72_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32371.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
64_010_scaffold_9_23
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32982..34412
DNA (1431bp) protein (477aa)
ATPase n=2 Tax=Bifidobacterium dentium RepID=D2Q802_BIFDB
ATPase {ECO:0000313|EMBL:ETY70396.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
ATPase; K06921
64_010_scaffold_9_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34441..34635
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=2 Tax=root RepID=D9ZE18_9ZZZZ
transposase
Transposase domain protein {ECO:0000313|EMBL:EIJ30311.1}; Flags: Fragment;; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
64_010_scaffold_9_25
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34718..35662)
DNA (945bp) protein (315aa)
Beta-lactamase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVR5_9BIFI
Beta-lactamase {ECO:0000313|EMBL:KFI48088.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
64_010_scaffold_9_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36212..37678
DNA (1467bp) protein (489aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTG7_BIFBR
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI87353.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
extracellular solute-binding protein family 5 protein; K02035 peptide/nickel transport system substrate-binding protein
64_010_scaffold_9_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37784..38662
DNA (879bp) protein (293aa)
Oligopeptide transport ATP-binding protein OppD family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E018_BIFBR
Oligopeptide transport ATP-binding protein OppD family protein {ECO:0000313|EMBL:ERI87352.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein
64_010_scaffold_9_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38659..39516
DNA (858bp) protein (286aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4P1_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87351.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ABC transporter; K02032 peptide/nickel transport system ATP-binding protein
64_010_scaffold_9_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39513..40496
DNA (984bp) protein (328aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CS52_BIFBR
ABC transporter, permease protein {ECO:0000313|EMBL:ERI87350.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
64_010_scaffold_9_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40502..41500
DNA (999bp) protein (333aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CA40_BIFBR
ABC transporter, permease protein {ECO:0000313|EMBL:ERI87349.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
Displaying items 1-30 of 206 in total

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