ggKbase home page

64_010_scaffold_286

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_286_1
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(716..925)
DNA (210bp) protein (70aa)
Molybdate-binding domain of ModE n=5 Tax=Veillonella RepID=T0T6E4_9FIRM
Putative molybdenum transport protein ModG {ECO:0000313|EMBL:EFG25166.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
TOBE domain-containing protein
64_010_scaffold_286_trna_1
unknown

Not on your lists

comp(1017..1087)
DNA (71bp)
transferRNA Gly
64_010_scaffold_286_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1226..2557
DNA (1332bp) protein (444aa)
Uncharacterized protein n=5 Tax=Veillonella RepID=T0T6F6_9FIRM
PepSY-associated TM helix superfamily {ECO:0000313|EMBL:EFG23371.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
PepSY-associated TM helix domain-containing protein
64_010_scaffold_286_3
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2631..3812
DNA (1182bp) protein (394aa)
UPI0003D68A49 related cluster n=1 Tax=unknown RepID=UPI0003D68A49
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
64_010_scaffold_286_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3848..5020
DNA (1173bp) protein (391aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Veillonella parvula RepID=T0SZG6_9FIRM
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
64_010_scaffold_286_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5283..5891
DNA (609bp) protein (203aa)
3D domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXQ9_9FIRM
3D domain protein {ECO:0000313|EMBL:EFB86609.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
3D domain-containing protein
64_010_scaffold_286_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6118..6936
DNA (819bp) protein (273aa)
Pur operon repressor PurR n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMJ1_9FIRM
Pur operon repressor PurR {ECO:0000313|EMBL:EFB86610.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
purine operon repressor, PurR; K09685 purine operon repressor
64_010_scaffold_286_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7068..8441
DNA (1374bp) protein (458aa)
UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
Bifunctional protein GlmU n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMJ2_9FIRM
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
64_010_scaffold_286_8
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8569..8769
DNA (201bp) protein (67aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella s
Ribose-phosphate pyrophosphokinase n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FRE0_9FIRM
64_010_scaffold_286_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8781..9374
DNA (594bp) protein (198aa)
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella p
Ribose-phosphate pyrophosphokinase n=5 Tax=Veillonella RepID=D1BLN4_VEIPT
64_010_scaffold_286_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9385..9963
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase n=4 Tax=Veillonella RepID=T0SZH0_9FIRM
64_010_scaffold_286_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10021..11502
DNA (1482bp) protein (494aa)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMJ5_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFB86614.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Orn/Lys/Arg decarboxylase major region
64_010_scaffold_286_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11505..12191
DNA (687bp) protein (229aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
dTMP kinase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMJ6_9FIRM
dTMP kinase {ECO:0000313|EMBL:EFB86615.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
64_010_scaffold_286_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12267..13307
DNA (1041bp) protein (347aa)
DNA polymerase III subunits gamma/tau; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III, delta' subunit domain protein n=2 Tax=Veillonella parvula RepID=D1YMJ7_9FIRM
DNA polymerase III, delta' subunit domain protein {ECO:0000313|EMBL:EFB86616.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
64_010_scaffold_286_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13308..14153
DNA (846bp) protein (282aa)
PSP1 C-terminal domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMJ8_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EFB86617.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
PSP1 domain-containing protein
64_010_scaffold_286_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14146..14871
DNA (726bp) protein (242aa)
tRNA (Adenine37-N(6)-)-methyltransferase TrmN6 n=3 Tax=Veillonella parvula RepID=T0SZH5_9FIRM
Methyltransferase small domain protein {ECO:0000313|EMBL:EGL78201.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
methyltransferase small
64_010_scaffold_286_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14861..15709
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I n=3 Tax=Veillonella parvula RepID=T0T6F4_9FIRM
64_010_scaffold_286_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


15744..17690
DNA (1947bp) protein (649aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=2 Tax=Veillonella parvula RepID=T0T6G8_9FIRM
64_010_scaffold_286_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17690..18460
DNA (771bp) protein (257aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
Hydrolase, TatD family n=2 Tax=Veillonella parvula RepID=D1YMK2_9FIRM
Putative deoxyribonuclease YcfH {ECO:0000313|EMBL:EQC66608.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
64_010_scaffold_286_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18675..20222
DNA (1548bp) protein (516aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Exopolyphosphatase n=3 Tax=Veillonella parvula RepID=T0U9Q7_9FIRM
Putative exopolyphosphatase {ECO:0000313|EMBL:EFB86622.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
64_010_scaffold_286_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20222..21787
DNA (1566bp) protein (522aa)
Exopolyphosphatase-like protein; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Exopolyphosphatase-like protein n=2 Tax=Veillonella parvula RepID=D1BLP5_VEIPT
Conserved domain protein {ECO:0000313|EMBL:EGL77907.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
64_010_scaffold_286_21
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21777..23894
DNA (2118bp) protein (706aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
polyphosphate kinase; K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase n=2 Tax=Veillonella RepID=D6KGZ2_9FIRM
64_010_scaffold_286_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24320..25297
DNA (978bp) protein (326aa)
3D domain protein n=4 Tax=Veillonella RepID=D1YMK6_9FIRM
3D protein {ECO:0000313|EMBL:ETJ02354.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
3D domain-containing protein
64_010_scaffold_286_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25420..26358)
DNA (939bp) protein (313aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
methionine-R-sulfoxide reductase; K12267 peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
Peptide methionine sulfoxide reductase MsrA n=3 Tax=Veillonella RepID=D6KGZ4_9FIRM
64_010_scaffold_286_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26359..27480)
DNA (1122bp) protein (374aa)
Methionine synthase vitamin-B12 independent n=2 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLP9_VEIPT
vitamin-B12 independent methionine synthase
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:ACZ24306.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
64_010_scaffold_286_25
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27738..28676)
DNA (939bp) protein (313aa)
Transcriptional regulator, MarR family n=4 Tax=Veillonella RepID=D1BLQ0_VEIPT
MarR family transcriptional regulator
Transcriptional regulator CpsY {ECO:0000313|EMBL:EFG23394.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
64_010_scaffold_286_26
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28747..29310
DNA (564bp) protein (188aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
primase/topoisomerase-like protein; K05985 ribonuclease M5 [EC:3.1.26.8]
Ribonuclease M5 n=3 Tax=Veillonella RepID=D1BLQ1_VEIPT
64_010_scaffold_286_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


29324..30178
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Veillonella RepID=D6KGZ8_9FIRM
64_010_scaffold_286_28
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30270..31517)
DNA (1248bp) protein (416aa)
Sodium:glutamate symporter n=3 Tax=Veillonella RepID=D6KGZ9_9FIRM
Sodium:glutamate symporter {ECO:0000313|EMBL:EFG25190.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
sodium/glutamate symporter; K03312 glutamate:Na+ symporter, ESS family
64_010_scaffold_286_29
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31963..33558)
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=2 Tax=Veillonella sp. 6_1_27 RepID=D6KM64_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
peptide chain release factor 3; K02837 peptide chain release factor 3
Displaying items 1-30 of 32 in total

View Taxonomy