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64_010_scaffold_39

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Displaying items 1-30 of 147 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_39_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..669
DNA (669bp) protein (223aa)
formate acetyltransferase (EC:2.3.1.54); K00656 formate C-acetyltransferase [EC:2.3.1.54]
Pyruvate formate-lyase {ECO:0000313|EMBL:CDL37227.1}; EC=2.3.1.54 {ECO:0000313|EMBL:CDL37227.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Formate C-acetyltransferase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBW3_9ENTR
64_010_scaffold_39_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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855..1595
DNA (741bp) protein (247aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
pflA; pyruvate formate lyase-activating enzyme 1 (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=11 Tax=Citrobacter RepID=D4BBW4_9ENTR
64_010_scaffold_39_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1639..3060)
DNA (1422bp) protein (474aa)
Inner membrane transporter ycaM n=8 Tax=Citrobacter RepID=C1M9I5_9ENTR
Transporter {ECO:0000313|EMBL:KJC08580.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ycaM; putative transport protein
64_010_scaffold_39_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3274..4422)
DNA (1149bp) protein (383aa)
Uncharacterized MFS-type transporter D186_05105 n=3 Tax=Citrobacter RepID=K8R1Z1_CITFR
Uncharacterized MFS-type transporter P834_05999 {ECO:0000256|HAMAP-Rule:MF_01149}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
putative MFS family transporter protein; K08219 MFS transporter, UMF2 family, putative MFS family transporter protein
64_010_scaffold_39_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4808..5434
DNA (627bp) protein (209aa)
Protein YcaC n=6 Tax=Citrobacter RepID=J1G728_9ENTR
Nicotinamidase family protein YcaC {ECO:0000313|EMBL:CDL37221.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
64_010_scaffold_39_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5544..6407)
DNA (864bp) protein (288aa)
Anaerobic dimethyl sulfoxide reductase chain C DMSO reductase anchor subunit n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CVP6_CITFR
DMSO reductase anchor subunit family protein {ECO:0000313|EMBL:KEL82681.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein; K07308 anaerobic dimethyl sulfoxide reductase subunit C (DMSO reductase anchor subunit)
64_010_scaffold_39_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6409..7026)
DNA (618bp) protein (206aa)
Dimethylsulfoxide reductase, chain B n=5 Tax=Citrobacter RepID=J1G6X1_9ENTR
Dimethyl sulfoxide reductase {ECO:0000313|EMBL:KJC08584.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K07307 anaerobic dimethyl sulfoxide reductase subunit B (DMSO reductase iron- sulfur subunit)
64_010_scaffold_39_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7037..9481)
DNA (2445bp) protein (815aa)
Anaerobic dimethyl sulfoxide reductase chain A {ECO:0000313|EMBL:CDL37217.1}; EC=1.8.99.- {ECO:0000313|EMBL:CDL37217.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Anaerobic dimethyl sulfoxide reductase subunit A n=2 Tax=Citrobacter RepID=K8QXC4_CITFR
dimethyl sulfoxide reductase subunit A
64_010_scaffold_39_9
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9718..11010)
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=4 Tax=Enterobacteriaceae RepID=I6HBR2_SHIFL
64_010_scaffold_39_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11103..12446)
DNA (1344bp) protein (448aa)
Replication-associated recombination protein A n=4 Tax=Citrobacter RepID=C1M9H8_9ENTR
Replication-associated recombination protein A {ECO:0000313|EMBL:KEL82685.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
AAA ATPase; K07478 putative ATPase
64_010_scaffold_39_11
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12457..13068)
DNA (612bp) protein (204aa)
Outer-membrane lipoprotein carrier protein n=7 Tax=Citrobacter RepID=C1M9H7_9ENTR
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
lolA; outer-membrane lipoprotein carrier protein; K03634 outer membrane lipoprotein carrier protein
64_010_scaffold_39_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13180..17241)
DNA (4062bp) protein (1354aa)
DNA translocase FtsK n=2 Tax=Citrobacter RepID=K8R5Y7_CITFR
Cell division protein FtsK {ECO:0000313|EMBL:KKB87154.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
64_010_scaffold_39_13
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17376..17870)
DNA (495bp) protein (165aa)
Leucine-responsive regulatory protein n=28 Tax=Enterobacteriaceae RepID=LRP_KLEPN
lrp; Leucine-responsive regulatory protein; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Leucine responsive regulatory protein {ECO:0000313|EMBL:EFC58020.1}; TaxID=500639 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cancerogenus ATCC 35316.;"
64_010_scaffold_39_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18418..19386
DNA (969bp) protein (323aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=4 Tax=Citrobacter RepID=K8QVQ8_CITFR
64_010_scaffold_39_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19501..21267
DNA (1767bp) protein (589aa)
Cysteine/glutathione ABC transporter membrane/ATP-binding component n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTW1_CITFR
ATP-binding/permease CydD {ECO:0000313|EMBL:ETX70275.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cysteine/glutathione ABC transporter membrane/ATP-binding component; K16013 ATP-binding cassette, subfamily C, bacterial CydD
64_010_scaffold_39_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21268..22989
DNA (1722bp) protein (574aa)
Cysteine/glutathione ABC transporter membrane/ATP-binding component n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CVQ6_CITFR
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJC08721.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cysteine/glutathione ABC transporter membrane/ATP-binding component; K16012 ATP-binding cassette, subfamily C, bacterial CydC
64_010_scaffold_39_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23034..23738
DNA (705bp) protein (235aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Ci
aat; leucyl/phenylalanyl-tRNA--protein transferase; K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl/phenylalanyl-tRNA--protein transferase n=5 Tax=Citrobacter RepID=J0M9R4_9ENTR
64_010_scaffold_39_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24024..24242
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=256 Tax=cellular organisms RepID=IF1_ENT38
translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
64_010_scaffold_39_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24322..25233)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=2 Tax=Citrobacter RepID=M3CC57_CITFR
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEL82695.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
64_010_scaffold_39_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25342..26202
DNA (861bp) protein (287aa)
Pirin-like protein n=2 Tax=Citrobacter RepID=M3BCU6_CITFR
Quercetin 2,3-dioxygenase {ECO:0000313|EMBL:KJC08725.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pirin-like protein; K06911
64_010_scaffold_39_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26219..26896
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V0B0_9ENTR
Nicotinamidase {ECO:0000313|EMBL:KJC08186.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_010_scaffold_39_trna_1
unknown

Not on your lists

27046..27130
DNA (85bp)
transferRNA Ser
64_010_scaffold_39_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27371..28498)
DNA (1128bp) protein (376aa)
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055322}; EC=2.1.1.189 {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055340};; 23S rRNA(m5U747)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01012}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
rumB; 23S rRNA methyluridine methyltransferase; K03212 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CGA3_CITFR
64_010_scaffold_39_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28540..29028)
DNA (489bp) protein (163aa)
Inner membrane protein ybjO n=8 Tax=Citrobacter RepID=C1M9G2_9ENTR
Inner membrane protein ybjO {ECO:0000313|EMBL:ETX72924.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_010_scaffold_39_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29088..29933)
DNA (846bp) protein (282aa)
Putrescine transport system permease potI n=6 Tax=Citrobacter RepID=J1G709_9ENTR
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KJC08227.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putrescine/spermidine ABC transporter permease
64_010_scaffold_39_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29930..30883)
DNA (954bp) protein (318aa)
Putrescine ABC transporter membrane protein n=5 Tax=Citrobacter RepID=J0M2Y6_9ENTR
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KJC08190.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
putrescine transporter subunit: membrane component of ABC superfamily
64_010_scaffold_39_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30893..32026)
DNA (1134bp) protein (378aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Putrescine transport ATP-binding protein PotG n=3 Tax=Citrobacter RepID=J1G6U9_9ENTR
potG; putrescine transporter ATP-binding subunit; K11076 putrescine transport system ATP-binding protein
64_010_scaffold_39_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32165..33277)
DNA (1113bp) protein (371aa)
Putrescine-binding periplasmic protein n=5 Tax=Citrobacter RepID=J0M9Q3_9ENTR
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
putrescine transporter subunit: periplasmic-binding component of ABC superfamily; K11073 putrescine transport system substrate-binding protein
64_010_scaffold_39_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33711..34187)
DNA (477bp) protein (159aa)
Cytoplasmic protein n=6 Tax=Citrobacter RepID=J0VVM9_9ENTR
Putative sensory transduction regulator {ECO:0000313|EMBL:CDL37185.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
64_010_scaffold_39_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34278..35180)
DNA (903bp) protein (301aa)
Ribosomal protein S6--L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; Poly-alpha-glutamate synthase {ECO:0000256|HAMAP-Rule:MF_01552}; Ribosomal protein S6 modification protein {ECO:0000256|HAMAP-Rule:MF_01552}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Ribosomal protein S6 modification protein n=5 Tax=Citrobacter RepID=J1G704_9ENTR
hypothetical protein; K05844 ribosomal protein S6 modification protein
Displaying items 1-30 of 147 in total

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