ggKbase home page

64_010_scaffold_140

Search features with annotation key words

Displaying items 1-30 of 98 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_140_1
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92..1114
DNA (1023bp) protein (341aa)
Transposase n=9 Tax=Enterobacteriaceae RepID=L0ART0_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:ESM39004.1}; TaxID=1329845 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae BWH 31.;"
transposase IS1111
64_010_scaffold_140_2
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1523..2449)
DNA (927bp) protein (309aa)
Uncharacterized protein n=109 Tax=Enterobacteriaceae RepID=B7L5W6_ECO55
Uncharacterized protein {ECO:0000313|EMBL:KJM86049.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
hypothetical protein
64_010_scaffold_140_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2461..3930)
DNA (1470bp) protein (490aa)
TniQ family protein n=11 Tax=Escherichia coli RepID=M8RN64_ECOLX
TnsD
TniQ family protein {ECO:0000313|EMBL:KEN87206.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
64_010_scaffold_140_4
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3971..5419)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=2 Tax=Escherichia RepID=T9I6R2_ECOLX
Tn7 transposition protein C {ECO:0000313|EMBL:KJM86048.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
Tn7-like transposition protein TnsC
64_010_scaffold_140_5
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5419..7542)
DNA (2124bp) protein (708aa)
Integrase core domain protein n=4 Tax=Escherichia coli RepID=N3GQE3_ECOLX
Tn7 transposition protein B {ECO:0000313|EMBL:KJM86047.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
Tn7-like transposition protein TnsB
64_010_scaffold_140_6
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7529..8371)
DNA (843bp) protein (281aa)
Tn7-like transposase TnsA n=214 Tax=Enterobacteriaceae RepID=B7L5X0_ECO55
Transposase {ECO:0000313|EMBL:KJM86046.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
Tn7-like transposase TnsA
64_010_scaffold_140_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8514..9716)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QVF5_CITFR
Membrane protein {ECO:0000313|EMBL:KKB87182.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K07007
64_010_scaffold_140_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9946..11445
DNA (1500bp) protein (500aa)
Phosphate transporter n=6 Tax=Citrobacter RepID=J0M5X1_9ENTR
Low-affinity inorganic phosphate transporter 1 {ECO:0000313|EMBL:KEL79986.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Low-affinity inorganic phosphate transporter
64_010_scaffold_140_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11510..11845)
DNA (336bp) protein (112aa)
Universal stress protein B n=12 Tax=Enterobacteriaceae RepID=C1MDH5_9ENTR
Universal stress protein B {ECO:0000256|HAMAP-Rule:MF_01088, ECO:0000256|SAAS:SAAS00025222}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
universal stress protein UspB; K06144 universal stress protein B
64_010_scaffold_140_10
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12238..12675
DNA (438bp) protein (146aa)
Universal stress protein n=12 Tax=Enterobacteriaceae RepID=C1MDH6_9ENTR
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
uspA; universal stress global response regulator; K06149 universal stress protein A
64_010_scaffold_140_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12957..14429
DNA (1473bp) protein (491aa)
Dipeptide and tripeptide permease B n=6 Tax=Citrobacter RepID=J1G3I5_9ENTR
Dipeptide and tripeptide permease B {ECO:0000256|HAMAP-Rule:MF_01879}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
PTR2 family transport protein; K03305 proton-dependent oligopeptide transporter, POT family
64_010_scaffold_140_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14478..14981)
DNA (504bp) protein (168aa)
Rrf2 family protein n=8 Tax=Citrobacter RepID=C1MDH8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67435.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_010_scaffold_140_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15214..16413
DNA (1200bp) protein (400aa)
hypothetical protein; K03885 NADH dehydrogenase [EC:1.6.99.3]
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UL96_9ENTR
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KJC03876.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_010_scaffold_140_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16519..17268)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; Ribosomal RNA small subunit methyltransferase J; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citroba
putative methyltransferase; K15984 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
Ribosomal RNA small subunit methyltransferase J n=2 Tax=Citrobacter RepID=M3DK95_CITFR
64_010_scaffold_140_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17403..19445)
DNA (2043bp) protein (681aa)
Oligopeptidase A {ECO:0000313|EMBL:KEL79979.1}; EC=3.4.24.70 {ECO:0000313|EMBL:KEL79979.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Oligopeptidase A n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CW44_CITFR
prlC; Oligopeptidase A
64_010_scaffold_140_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19654..20496
DNA (843bp) protein (281aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Ribosomal RNA large subunit methyltransferase J n=6 Tax=Citrobacter RepID=J1G3I8_9ENTR
hypothetical protein; K07115
64_010_scaffold_140_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20601..21953
DNA (1353bp) protein (451aa)
Glutathione reductase {ECO:0000313|EMBL:KJC05211.1}; EC=1.8.1.7 {ECO:0000313|EMBL:KJC05211.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glutathione-disulfide reductase; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
Glutathione reductase n=2 Tax=Citrobacter RepID=K8QVE8_CITFR
64_010_scaffold_140_18
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22131..22262
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HDV3_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ78945.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
64_010_scaffold_140_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22486..23880)
DNA (1395bp) protein (465aa)
hypothetical protein; K00428 cytochrome c peroxidase [EC:1.11.1.5]
Cytochrome C peroxidase n=3 Tax=Citrobacter RepID=K8QS11_CITFR
Cytochrome C peroxidase {ECO:0000313|EMBL:ETX61480.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
64_010_scaffold_140_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24308..25957
DNA (1650bp) protein (550aa)
Cytoplasmic trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; EC=3.2.1.28 {ECO:0000256|HAMAP-Rule:MF_01059};; Alpha,alpha-trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; Alpha,alpha-trehalose glucohydrolase {ECO:0000256|HAMAP-Rule:MF_01059}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
treF; trehalase; K01194 alpha,alpha-trehalase [EC:3.2.1.28]
Cytoplasmic trehalase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CW38_CITFR
64_010_scaffold_140_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25985..27574)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BD75_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL79973.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein
64_010_scaffold_140_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27742..28281
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8ULA6_9ENTR
Acetyltransferase family protein {ECO:0000313|EMBL:KEL79972.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
protein YnaD
64_010_scaffold_140_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28368..28718
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UPC8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67447.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
phage endolysin
64_010_scaffold_140_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28737..29339)
DNA (603bp) protein (201aa)
Two-component system response regulator n=1 Tax=Citrobacter sp. KTE30 RepID=R8UKG4_9ENTR
Two-component system response regulator {ECO:0000313|EMBL:ETX67448.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
LuxR family transcriptional regulator
64_010_scaffold_140_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29701..30549)
DNA (849bp) protein (283aa)
Protein YcgG n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTS5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC11694.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ycgG; protein YcgG
64_010_scaffold_140_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30749..31189)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R033_CITFR
Membrane protein {ECO:0000313|EMBL:KJC05218.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_010_scaffold_140_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31711..32469)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase reductase sdr n=6 Tax=Citrobacter RepID=J1G3J8_9ENTR
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC05219.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
short-chain dehydrogenase/reductase SDR
64_010_scaffold_140_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32589..33488
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8R3Y4_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC05220.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
64_010_scaffold_140_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33536..34561
DNA (1026bp) protein (342aa)
Inner membrane protein yhjD n=1 Tax=Citrobacter sp. KTE30 RepID=R8UKG9_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC11698.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K07058 membrane protein
64_010_scaffold_140_30
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34912..36234
DNA (1323bp) protein (441aa)
Inner membrane metabolite transporter yhjE n=10 Tax=Citrobacter RepID=C1MDJ5_9ENTR
Inner membrane metabolite transporter yhjE {ECO:0000313|EMBL:EOQ45086.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
major facilitator superfamily protein
Displaying items 1-30 of 98 in total

View Taxonomy