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64_010_scaffold_198

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_198_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 188 (4-2356988) RepID=T7QXN2_ECOLX
tnaB; tryptophan transporter of low affinity; K03836 low affinity tryptophan permease
D-allose kinase domain protein {ECO:0000313|EMBL:KDX24109.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
64_010_scaffold_198_2
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172..765)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XCI9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFF75500.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
64_010_scaffold_198_3
unknown

Not on your lists

comp(788..1747)
DNA (960bp) protein (320aa)

This feature has no annotations

64_010_scaffold_198_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2161..2676
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3834-1 RepID=T9VPY3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV98755.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
64_010_scaffold_198_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2766..3167
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KDF18364.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
64_010_scaffold_198_6
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3929..4576)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5Z0U0_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KKB03523.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
hypothetical protein
64_010_scaffold_198_7
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4573..5634)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5Z392_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KKB03522.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
hypothetical protein
64_010_scaffold_198_8
unknown

Not on your lists

6612..6941
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DW98_CITFR
64_010_scaffold_198_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7048..8091
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DUY7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX64699.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
64_010_scaffold_198_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..9204)
DNA (1005bp) protein (335aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:KEL82140.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KEL82140.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
tryptophanyl-tRNA synthetase II (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan-tRNA ligase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UTE5_9ENTR
64_010_scaffold_198_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9406..11190)
DNA (1785bp) protein (595aa)
Diguanylate cyclase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWW1_CITFR
Diguanylate cyclase domain protein {ECO:0000313|EMBL:KEL82139.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
diguanylate cyclase
64_010_scaffold_198_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11311..12420)
DNA (1110bp) protein (370aa)
Protein YdiK n=2 Tax=Citrobacter RepID=K8R336_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL82138.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
protein YdiK
64_010_scaffold_198_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12586..13068)
DNA (483bp) protein (161aa)
peroxiredoxin; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=2 Tax=Citrobacter RepID=M3DWA2_CITFR
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
64_010_scaffold_198_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13153..15117)
DNA (1965bp) protein (655aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R749_CITFR
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDL41566.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
diguanylate cyclase/phosphodiesterase
64_010_scaffold_198_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15135..15629)
DNA (495bp) protein (165aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J1FXL4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDL41565.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
64_010_scaffold_198_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16039..16680)
DNA (642bp) protein (214aa)
Dna-binding protein n=6 Tax=Citrobacter RepID=J0LTR8_9ENTR
DNA-binding protein {ECO:0000313|EMBL:KJC12450.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
YheO domain protein
64_010_scaffold_198_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16808..17776)
DNA (969bp) protein (323aa)
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Serine racemase n=4 Tax=Citrobacter RepID=J1FXT2_9ENTR
Serine racemase {ECO:0000313|EMBL:ETX70772.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_010_scaffold_198_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17804..18199)
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP n=6 Tax=Citrobacter RepID=J0VLA7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70773.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
endoribonuclease L-PSP
64_010_scaffold_198_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18422..18730)
DNA (309bp) protein (103aa)
Monooxygenase n=3 Tax=Citrobacter RepID=K8R745_CITFR
Putative monooxygenase ydhR {ECO:0000313|EMBL:KEL82131.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
monooxygenase
64_010_scaffold_198_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18767..19558)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CN38_CITFR
Isomerase {ECO:0000313|EMBL:KJC09332.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K06998
64_010_scaffold_198_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19688..20386
DNA (699bp) protein (233aa)
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:CDL41557.1}; EC=4.2.1.70 {ECO:0000313|EMBL:CDL41557.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Pseudouridine synthase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWV3_CITFR
64_010_scaffold_198_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20426..21799)
DNA (1374bp) protein (458aa)
Multidrug resistance protein MdtK n=2 Tax=Citrobacter freundii RepID=K8R330_CITFR
Multidrug resistance protein MdtK {ECO:0000256|HAMAP-Rule:MF_00400, ECO:0000256|SAAS:SAAS00182200}; Multidrug-efflux transporter {ECO:0000256|HAMAP-Rule:MF_00400}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Multidrug and toxin extrusion (MATE) familyefflux pump YdhE/NorM
64_010_scaffold_198_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22017..22664
DNA (648bp) protein (216aa)
riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase alpha chain n=4 Tax=Citrobacter RepID=C1M461_9ENTR
Riboflavin synthase alpha chain {ECO:0000313|EMBL:ETX64715.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
64_010_scaffold_198_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22706..23854)
DNA (1149bp) protein (383aa)
cyclopropane fatty acyl phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase n=4 Tax=Citrobacter RepID=J0LZX8_9ENTR
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ETX70779.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
64_010_scaffold_198_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24145..25350)
DNA (1206bp) protein (402aa)
Transporter n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BNR0_CITFR
Transporter {ECO:0000313|EMBL:KJC12441.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
inner membrane transport protein YdhC
64_010_scaffold_198_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25464..26396
DNA (933bp) protein (311aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=C1M464_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:ETX70781.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
putative DNA-binding transcriptional regulator
64_010_scaffold_198_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26393..27418)
DNA (1026bp) protein (342aa)
Pur regulon repressor n=6 Tax=Citrobacter RepID=J1FXU0_9ENTR
HTH-type transcriptional repressor purR {ECO:0000313|EMBL:ETX70782.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
purR; purine nucleotide synthesis repressor; K03604 LacI family transcriptional regulator, purine nucleotide synthesis repressor
64_010_scaffold_198_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27716..27805
DNA (90bp) protein (30aa)
Uncharacterized protein n=9 Tax=Citrobacter RepID=C1M466_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70783.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
64_010_scaffold_198_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27981..29150
DNA (1170bp) protein (390aa)
Inner membrane transporter YdhP n=4 Tax=Citrobacter RepID=J0LZY4_9ENTR
MFS transporter {ECO:0000313|EMBL:KJC09340.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
64_010_scaffold_198_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29190..29771)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=8 Tax=Citrobacter RepID=C1M468_9ENTR
Displaying items 1-30 of 48 in total

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