ggKbase home page

64_010_scaffold_153

Search features with annotation key words

Displaying items 1-30 of 46 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_153_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

143..454
DNA (312bp) protein (104aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=T2U194_CLODI
endonuclease; K07461 putative endonuclease
Uncharacterized protein {ECO:0000313|EMBL:EQI85077.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_010_scaffold_153_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

739..1533
DNA (795bp) protein (265aa)
thiD; phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EQE65892.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EQE65892.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Phosphomethylpyrimidine kinase n=175 Tax=Clostridium difficile RepID=C9XMJ1_CLODC
64_010_scaffold_153_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1557..2345
DNA (789bp) protein (263aa)
thiK; hydroxyethylthiazole kinase (EC:2.7.1.50); K00878 hydroxyethylthiazole kinase [EC:2.7.1.50]
Hydroxyethylthiazole kinase {ECO:0000255|HAMAP-Rule:MF_00228}; EC=2.7.1.50 {ECO:0000255|HAMAP-Rule:MF_00228};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000255|HAMAP-Rule:MF_00228}; Short=TH kinase {ECO:0000255|HAMAP-Rule:MF_00228};; Short=Thz kinase {ECO:0000255|HAMAP-Rule:MF_00228};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Hydroxyethylthiazole kinase n=39 Tax=Clostridium difficile RepID=THIM_CLOD6
64_010_scaffold_153_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2368..3000
DNA (633bp) protein (211aa)
thiE1; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
Thiamine-phosphate synthase n=133 Tax=Clostridium difficile RepID=THIE_CLOD6
64_010_scaffold_153_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3139..3441
DNA (303bp) protein (101aa)
PTS system transporter subunit IIB; K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
Lichenan-specific phosphotransferase enzyme IIB component n=153 Tax=Clostridium difficile RepID=T3H5R4_CLODC
PTS system, lactose/cellobiose-family IIB component {ECO:0000313|EMBL:CCL21747.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_153_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3507..4256)
DNA (750bp) protein (250aa)
ABC-type transport system, multidrug-family permease n=57 Tax=Clostridium difficile RepID=Q186F6_CLOD6
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_153_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4250..5212)
DNA (963bp) protein (321aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH08085.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH08085.1};; ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CDS86830.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDS86830.1};; ABC-type transport system, multidrug-familyATP-binding protein {ECO:0000313|EMBL:CEJ98196.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEJ98196.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
ABC transporter family protein n=114 Tax=Clostridium difficile RepID=T3HAW4_CLODC
ABC transporter ATP-binding protein
64_010_scaffold_153_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5216..5674)
DNA (459bp) protein (153aa)
GyrI-like small molecule binding domain protein n=147 Tax=Clostridium difficile RepID=T3H8Q9_CLODC
hypothetical protein
GyrI-like small molecule binding domain protein {ECO:0000313|EMBL:EQE65865.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_153_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6030..6386
DNA (357bp) protein (119aa)
Bacterial regulatory s, gntR family protein n=188 Tax=Clostridium difficile RepID=C9XP49_CLODC
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQG76008.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_153_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6458..7174
DNA (717bp) protein (239aa)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CCL21752.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL21752.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC transporter, ATP-binding protein n=175 Tax=Clostridium difficile RepID=C9XP50_CLODC
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein
64_010_scaffold_153_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7167..7991
DNA (825bp) protein (275aa)
ABC-type transport system, multidrug-family permease n=118 Tax=Clostridium difficile RepID=Q186G5_CLOD6
ABC transporter permease
Putative membrane protein {ECO:0000313|EMBL:EQE65906.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_153_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8003..9202
DNA (1200bp) protein (400aa)
Uncharacterized protein n=60 Tax=Clostridium difficile RepID=Q186G4_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65898.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_153_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9211..10023
DNA (813bp) protein (271aa)
Uncharacterized protein n=118 Tax=Clostridium difficile RepID=Q186G3_CLOD6
hypothetical protein
ABC-2 transporter family protein {ECO:0000313|EMBL:EQI00027.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_010_scaffold_153_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10034..11302
DNA (1269bp) protein (423aa)
Uncharacterized protein n=24 Tax=Clostridium difficile RepID=Q186G6_CLOD6
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH08287.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98203.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_153_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11668..12849
DNA (1182bp) protein (394aa)
Amidohydrolase family protein n=165 Tax=Clostridium difficile RepID=T3H5A9_CLODC
amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:CCL29812.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_153_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12991..13908)
DNA (918bp) protein (306aa)
Uncharacterized protein n=142 Tax=Clostridium difficile RepID=T3HA44_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29813.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_153_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14161..14955
DNA (795bp) protein (265aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CEJ98206.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEJ98206.1};; Sodium extrusion ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH08341.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC transporter family protein n=41 Tax=Clostridium difficile RepID=T3H8A7_CLODC
sodium extrusion ABC transporter ATP-binding protein; K09697 sodium transport system ATP-binding protein
64_010_scaffold_153_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14956..17016
DNA (2061bp) protein (687aa)
ABC-type transport system, permease n=21 Tax=Clostridium difficile RepID=Q186H0_CLOD6
ABC-type transport system, permease {ECO:0000313|EMBL:CDT82445.1}; Sodium extrusion ABC transporter permease {ECO:0000313|EMBL:CKH08370.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
sodium extrusion ABC transporter permease; K09696 sodium transport system permease protein
64_010_scaffold_153_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17698..19242
DNA (1545bp) protein (515aa)
Diguanylate cyclase domain protein n=72 Tax=Clostridium difficile RepID=T3PTX7_CLODI
Putative diguanylate kinase signaling protein {ECO:0000313|EMBL:CCL21761.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
signaling protein
64_010_scaffold_153_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19418..19786
DNA (369bp) protein (123aa)
Bacterial regulatory s, gntR family protein n=180 Tax=Clostridium difficile RepID=C9XPS3_CLODC
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EHJ24982.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
64_010_scaffold_153_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19788..20513
DNA (726bp) protein (242aa)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CAJ68483.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ68483.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
ABC transporter family protein n=190 Tax=Clostridium difficile RepID=C9XPS4_CLODC
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein
64_010_scaffold_153_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20507..21271
DNA (765bp) protein (255aa)
ABC-type transport system, multidrug-family permease n=198 Tax=Clostridium difficile RepID=Q186H5_CLOD6
ABC transporter permease
ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CCL21764.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_153_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21493..22743
DNA (1251bp) protein (417aa)
Major Facilitator Superfamily protein n=88 Tax=Clostridium difficile RepID=T3H565_CLODC
permease
Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CAJ68485.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_153_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22936..23820
DNA (885bp) protein (295aa)
Mechanosensitive ion channel family protein n=102 Tax=Clostridium difficile RepID=T3HA05_CLODC
mechanosensitive ion channel protein
Mechanosensitive ion channel protein {ECO:0000313|EMBL:CKH08504.1}; Putative mechanosensitive ion channel protein, MscS family {ECO:0000313|EMBL:CDS87186.1}; Putative mechanosensitive ion channel protein,MscS family {ECO:0000313|EMBL:CDS86853.1}; Putative mechanosensitive ion channelprotein,MscS family {ECO:0000313|EMBL:CEJ98213.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_153_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23941..24084
DNA (144bp) protein (48aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2TIN9_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CKH08542.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_153_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24182..24799
DNA (618bp) protein (206aa)
Peptidase propeptide and YPEB domain protein n=104 Tax=Clostridium difficile RepID=T3HAE9_CLODC
lipoprotein
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EQH99292.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_010_scaffold_153_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24907..27438
DNA (2532bp) protein (844aa)
Flavo-diiron FprA1 domain protein n=24 Tax=Clostridium difficile RepID=T3H872_CLODC
Putative oxidoreductase {ECO:0000313|EMBL:CAJ68488.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
nitric oxide reductase flavoprotein
64_010_scaffold_153_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27872..28573
DNA (702bp) protein (234aa)
Response regulator n=177 Tax=Clostridium difficile RepID=T3H6Q8_CLODC
vanR; two-component response regulator
Response regulator {ECO:0000313|EMBL:EQE65711.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_153_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28638..29705
DNA (1068bp) protein (356aa)
vanS; two-component sensor histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
His Kinase A domain protein n=9 Tax=Clostridium difficile RepID=T3H570_CLODC
64_010_scaffold_153_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29966..31066
DNA (1101bp) protein (367aa)
vanG; vancomycin/teicoplanin A-type resistance protein; K15739 D-alanine---(R)-lactate ligase [EC:6.1.2.1]
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
D-alanine--D-alanine ligase n=42 Tax=Clostridium difficile RepID=T3HA10_CLODC
Displaying items 1-30 of 46 in total

View Taxonomy